RNA–Protein interactions for RNA: YOR204W

DED1, Transcript of ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, yeast

Gene DED1, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DED1	YOR204W	GAS1	P22146	559 aa	Known RBP	10.42	□□□□□ -0.74
DED1	YOR204W	SBA1	P28707	216 aa	Known RBP	10.42	□□□□□ -0.74
DED1	YOR204W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	10.42	□□□□□ -0.74	not detected
DED1	YOR204W	NIC96	P34077	839 aa		10.42	□□□□□ -0.74
DED1	YOR204W	APD1	P38281	316 aa		10.42	□□□□□ -0.74
DED1	YOR204W	CHS7	P38843	316 aa		10.42	□□□□□ -0.74
DED1	YOR204W	SHO1	P40073	367 aa		10.42	□□□□□ -0.74
DED1	YOR204W	IDS2	P46958	469 aa		10.42	□□□□□ -0.74
DED1	YOR204W	SSY5	P47002	699 aa		10.42	□□□□□ -0.74
DED1	YOR204W	RDL2	Q08742	149 aa	Known RBP	10.42	□□□□□ -0.74
DED1	YOR204W	YGR161W-C	Q3E744	92 aa		10.42	□□□□□ -0.74
DED1	YOR204W	CDC9	P04819	755 aa		10.42	□□□□□ -0.74
DED1	YOR204W	CPR2	P23285	205 aa		10.42	□□□□□ -0.74
DED1	YOR204W	YKR015C	P36111	568 aa		10.42	□□□□□ -0.74
DED1	YOR204W	MAL32	P38158	584 aa		10.42	□□□□□ -0.74
DED1	YOR204W	SHE1	P38200	338 aa		10.42	□□□□□ -0.74
DED1	YOR204W	YTA6	P40328	754 aa		10.42	□□□□□ -0.74
DED1	YOR204W	NIT2	P47016	307 aa		10.42	□□□□□ -0.74
DED1	YOR204W	SAM37	P50110	327 aa		10.42	□□□□□ -0.74
DED1	YOR204W	YGR126W	P53274	230 aa		10.42	□□□□□ -0.74
DED1	YOR204W	PBP1	P53297	722 aa	Known RBP	10.42	□□□□□ -0.74
DED1	YOR204W	MAL12	P53341	584 aa		10.42	□□□□□ -0.74
DED1	YOR204W	SDC1	Q03323	175 aa		10.42	□□□□□ -0.74
DED1	YOR204W	YLR173W	Q06247	608 aa		10.42	□□□□□ -0.74
DED1	YOR204W	FRE5	Q08908	694 aa		10.42	□□□□□ -0.74
DED1	YOR204W	IES3	Q12345	250 aa		10.42	□□□□□ -0.74
DED1	YOR204W	PCL9	Q12477	304 aa		10.42	□□□□□ -0.74
DED1	YOR204W	SET6	Q12529	373 aa		10.42	□□□□□ -0.74
DED1	YOR204W	PHO80	P20052	293 aa		10.41	□□□□□ -0.74
DED1	YOR204W	AIM17	P23180	465 aa	Known RBP	10.41	□□□□□ -0.74
DED1	YOR204W	MSN4	P33749	630 aa		10.41	□□□□□ -0.74
DED1	YOR204W	MDE1	P47095	244 aa		10.41	□□□□□ -0.74
DED1	YOR204W	HOL1	P53389	586 aa		10.41	□□□□□ -0.74
DED1	YOR204W	SCS7	Q03529	384 aa		10.41	□□□□□ -0.74
DED1	YOR204W	PLP1	Q04004	230 aa		10.41	□□□□□ -0.74
DED1	YOR204W	MRPL1	Q04599	285 aa		10.41	□□□□□ -0.74
DED1	YOR204W	IRC19	Q07843	230 aa		10.41	□□□□□ -0.74
DED1	YOR204W	BLM10	P43583	2143 aa		10.41	□□□□□ -0.74
DED1	YOR204W	FLO9	P39712	1322 aa		10.41	□□□□□ -0.74
DED1	YOR204W	COS9	P36034	407 aa		10.4	□□□□□ -0.74
DED1	YOR204W	YKR073C	P36153	106 aa		10.4	□□□□□ -0.74
DED1	YOR204W	SRL3	P36167	246 aa		10.4	□□□□□ -0.74
DED1	YOR204W	MOH1	P38191	138 aa		10.4	□□□□□ -0.74
DED1	YOR204W	RPS26A	P39938	119 aa	Known RBP	10.4	□□□□□ -0.74
DED1	YOR204W	RPS26B	P39939	119 aa	Known RBP	10.4	□□□□□ -0.74
DED1	YOR204W	PRY1	P47032	299 aa		10.4	□□□□□ -0.74
DED1	YOR204W	COS10	P52924	374 aa		10.4	□□□□□ -0.74
DED1	YOR204W	OGG1	P53397	376 aa	Predicted RBP	10.4	□□□□□ -0.74
DED1	YOR204W	AGE1	Q04412	482 aa		10.4	□□□□□ -0.74
DED1	YOR204W	YOL024W	Q08172	172 aa		10.4	□□□□□ -0.74
DED1	YOR204W	YFR010W-A	P0C5N0	62 aa		10.4	□□□□□ -0.75
DED1	YOR204W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	10.4	□□□□□ -0.75	not detected
DED1	YOR204W	FPS1	P23900	669 aa		10.4	□□□□□ -0.75
DED1	YOR204W	PAM16	P42949	149 aa		10.4	□□□□□ -0.75
DED1	YOR204W	TFB3	Q03290	321 aa		10.4	□□□□□ -0.75
DED1	YOR204W	NEJ1	Q06148	342 aa		10.4	□□□□□ -0.75
DED1	YOR204W	MTR10	Q99189	972 aa		10.4	□□□□□ -0.75
DED1	YOR204W	SEC16	P48415	2195 aa	Known RBP	10.39	□□□□□ -0.75
DED1	YOR204W	MDH2	P22133	377 aa		10.39	□□□□□ -0.75
DED1	YOR204W	ADH7	P25377	361 aa		10.39	□□□□□ -0.75
DED1	YOR204W	PPA2	P28239	310 aa		10.39	□□□□□ -0.75
DED1	YOR204W	YEL057C	P39983	233 aa		10.39	□□□□□ -0.75
DED1	YOR204W	SEC24	P40482	926 aa	Known RBP	10.39	□□□□□ -0.75
DED1	YOR204W	PPT1	P53043	513 aa		10.39	□□□□□ -0.75
DED1	YOR204W	SCW11	P53189	542 aa		10.39	□□□□□ -0.75
DED1	YOR204W	MNT4	P53745	580 aa		10.39	□□□□□ -0.75
DED1	YOR204W	PDR16	P53860	351 aa	Known RBP	10.39	□□□□□ -0.75
DED1	YOR204W	MLC2	Q06580	163 aa		10.39	□□□□□ -0.75
DED1	YOR204W	MCM21	Q06675	368 aa		10.39	□□□□□ -0.75
DED1	YOR204W	TMS1	Q12116	473 aa		10.39	□□□□□ -0.75
DED1	YOR204W	YAL064W-B	O13512	126 aa		10.38	□□□□□ -0.75
DED1	YOR204W	STE12	P13574	688 aa		10.38	□□□□□ -0.75
DED1	YOR204W	TAL1	P15019	335 aa	Known RBP	10.38	□□□□□ -0.75
DED1	YOR204W	NFS1	P25374	497 aa		10.38	□□□□□ -0.75
DED1	YOR204W	ATS1	P31386	333 aa		10.38	□□□□□ -0.75
DED1	YOR204W	SUR1	P33300	382 aa		10.38	□□□□□ -0.75
DED1	YOR204W	RFC4	P40339	323 aa	Known RBP	10.38	□□□□□ -0.75
DED1	YOR204W	FMC1	P40491	155 aa		10.38	□□□□□ -0.75
DED1	YOR204W	IRC5	P43610	853 aa		10.38	□□□□□ -0.75
DED1	YOR204W	HNT3	Q08702	217 aa		10.38	□□□□□ -0.75
DED1	YOR204W	HMS1	Q12398	434 aa		10.38	□□□□□ -0.75
DED1	YOR204W	NTA1	P40354	457 aa		10.37	□□□□□ -0.75
DED1	YOR204W	YIL165C	P40446	119 aa		10.37	□□□□□ -0.75
DED1	YOR204W	SFH5	P47008	294 aa		10.37	□□□□□ -0.75
DED1	YOR204W	BPL1	P48445	690 aa	Predicted RBP	10.37	□□□□□ -0.75
DED1	YOR204W	VOA1	P53262	265 aa		10.37	□□□□□ -0.75
DED1	YOR204W	YMR315W	Q04869	349 aa	Known RBP	10.37	□□□□□ -0.75
DED1	YOR204W	UTP21	Q06078	939 aa	Predicted RBP	10.37	□□□□□ -0.75
DED1	YOR204W	NFT1	P0CE68	1218 aa		10.37	□□□□□ -0.75
DED1	YOR204W	DPB2	P24482	689 aa	Predicted RBP	10.37	□□□□□ -0.75
DED1	YOR204W	HIS7	P33734	552 aa	Known RBP	10.37	□□□□□ -0.75
DED1	YOR204W	CHK1	P38147	527 aa		10.37	□□□□□ -0.75
DED1	YOR204W	PHO90	P39535	881 aa		10.37	□□□□□ -0.75
DED1	YOR204W	SAY1	P53324	424 aa		10.37	□□□□□ -0.75
DED1	YOR204W	YPL039W	Q03080	316 aa		10.37	□□□□□ -0.75
DED1	YOR204W	YPR147C	Q06522	304 aa	Known RBP	10.37	□□□□□ -0.75
DED1	YOR204W	TSR2	Q06672	205 aa	Known RBP	10.37	□□□□□ -0.75
DED1	YOR204W	THP3	Q12049	470 aa	Known RBP	10.37	□□□□□ -0.75
DED1	YOR204W	RPP2B	P02400	110 aa	Known RBP	10.36	□□□□□ -0.75
DED1	YOR204W	RPL7A	P05737	244 aa	Known RBP	10.36	□□□□□ -0.75

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms