RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C SNC2P33328 115 aa3.82□□□□□ -1.8
VHS3YOR054C ASC1P38011 319 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C POA1P38218 177 aa3.82□□□□□ -1.8
VHS3YOR054C MTC4P38335 694 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C PEX28P38848 579 aa3.82□□□□□ -1.8
VHS3YOR054C PRM9P39551 298 aa3.82□□□□□ -1.8
VHS3YOR054C GIM4P40005 111 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C PIC2P40035 300 aa3.82□□□□□ -1.8
VHS3YOR054C GET2P40056 285 aa3.82□□□□□ -1.8
VHS3YOR054C SKP2P42843 763 aa3.82□□□□□ -1.8
VHS3YOR054C LOC1P43586 204 aaPredicted RBP3.82□□□□□ -1.8
VHS3YOR054C IRC7P43623 340 aa3.82□□□□□ -1.8
VHS3YOR054C LOH1P47055 219 aa3.82□□□□□ -1.8
VHS3YOR054C YJR111CP47148 283 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C PHB2P50085 310 aa3.82□□□□□ -1.8
VHS3YOR054C GPG1P53130 126 aa3.82□□□□□ -1.8
VHS3YOR054C YGR012WP53206 393 aa3.82□□□□□ -1.8
VHS3YOR054C FMP41P53889 259 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C RHO4Q00246 291 aa3.82□□□□□ -1.8
VHS3YOR054C YMR087WQ04299 284 aa3.82□□□□□ -1.8
VHS3YOR054C GRC3Q07845 632 aa3.82□□□□□ -1.8
VHS3YOR054C PLB3Q08108 686 aa3.82□□□□□ -1.8
VHS3YOR054C NBP2Q12163 236 aa3.82□□□□□ -1.8
VHS3YOR054C IZH4Q99393 312 aa3.82□□□□□ -1.8
VHS3YOR054C ADH2P00331 348 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C RPL4AP10664 362 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C PUT4P15380 627 aa3.82□□□□□ -1.8
VHS3YOR054C ERD2P18414 219 aa3.82□□□□□ -1.8
VHS3YOR054C SAM2P19358 384 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C SEC62P21825 274 aa3.82□□□□□ -1.8
VHS3YOR054C SFP1P32432 683 aa3.82□□□□□ -1.8
VHS3YOR054C CDC12P32468 407 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C SUA5P32579 426 aa3.82□□□□□ -1.8
VHS3YOR054C YBR063CP38083 404 aa3.82□□□□□ -1.8
VHS3YOR054C FLR1P38124 548 aa3.82□□□□□ -1.8
VHS3YOR054C HSE1P38753 452 aa3.82□□□□□ -1.8
VHS3YOR054C LRP1P38801 184 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C YHR122WP38829 231 aa3.82□□□□□ -1.8
VHS3YOR054C SLZ1P40167 298 aa3.82□□□□□ -1.8
VHS3YOR054C MMF1P40185 145 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C GAT2P40209 560 aa3.82□□□□□ -1.8
VHS3YOR054C AIM25P47140 327 aa3.82□□□□□ -1.8
VHS3YOR054C YJR115WP47152 169 aa3.82□□□□□ -1.8
VHS3YOR054C HMS2P47175 358 aa3.82□□□□□ -1.8
VHS3YOR054C PUS4P48567 403 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C RPL4BP49626 362 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C TAF4P50105 388 aa3.82□□□□□ -1.8
VHS3YOR054C MTL1P53214 551 aa3.82□□□□□ -1.8
VHS3YOR054C YGR127WP53275 312 aa3.82□□□□□ -1.8
VHS3YOR054C YNL165WP53891 406 aa3.82□□□□□ -1.8
VHS3YOR054C GPI15P53961 229 aa3.82□□□□□ -1.8
VHS3YOR054C SAM50P53969 484 aa3.82□□□□□ -1.8
VHS3YOR054C STD1Q02794 444 aa3.82□□□□□ -1.8
VHS3YOR054C CTK1Q03957 528 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C SEC13Q04491 297 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C MRL1Q06815 381 aa3.82□□□□□ -1.8
VHS3YOR054C NRT1Q08485 598 aa3.82□□□□□ -1.8
VHS3YOR054C FDH1Q08911 376 aa3.82□□□□□ -1.8
VHS3YOR054C YIL134C-AQ45U18 67 aa3.82□□□□□ -1.8
VHS3YOR054C ASP3-2P0CX77 362 aa3.81□□□□□ -1.8
VHS3YOR054C ASP3-3P0CX78 362 aa3.81□□□□□ -1.8
VHS3YOR054C ASP3-4P0CX79 362 aa3.81□□□□□ -1.8
VHS3YOR054C ASP3-1P0CZ17 362 aa3.81□□□□□ -1.8
VHS3YOR054C MET8P15807 274 aa3.81□□□□□ -1.8
VHS3YOR054C SEC22P22214 214 aa3.81□□□□□ -1.8
VHS3YOR054C LAC1P28496 418 aa3.81□□□□□ -1.8
VHS3YOR054C EHD3P28817 500 aa3.81□□□□□ -1.8
VHS3YOR054C RTC2P38279 296 aa3.81□□□□□ -1.8
VHS3YOR054C YBR184WP38299 523 aa3.81□□□□□ -1.8
VHS3YOR054C SRP68P38687 599 aaKnown RBP3.81□□□□□ -1.8
VHS3YOR054C HTD2P38790 280 aaKnown RBP3.81□□□□□ -1.8
VHS3YOR054C PHO90P39535 881 aa3.81□□□□□ -1.8
VHS3YOR054C RRT5P43607 289 aa3.81□□□□□ -1.8
VHS3YOR054C YHC3P47040 408 aa3.81□□□□□ -1.8
VHS3YOR054C BIT61P47041 543 aa3.81□□□□□ -1.8
VHS3YOR054C NUP57P48837 541 aa3.81□□□□□ -1.8
VHS3YOR054C AMA1P50082 593 aa3.81□□□□□ -1.8
VHS3YOR054C YGL114WP53134 725 aa3.81□□□□□ -1.8
VHS3YOR054C SAY1P53324 424 aa3.81□□□□□ -1.8
VHS3YOR054C SAE3P89114 91 aa3.81□□□□□ -1.8
VHS3YOR054C TRS31Q03337 283 aa3.81□□□□□ -1.8
VHS3YOR054C TVP18Q04767 167 aa3.81□□□□□ -1.8
VHS3YOR054C SDO1Q07953 250 aaKnown RBP3.81□□□□□ -1.8
VHS3YOR054C GPB1Q08886 897 aa3.81□□□□□ -1.8
VHS3YOR054C YPL272CQ08984 517 aa3.81□□□□□ -1.8
VHS3YOR054C YDR056CQ12025 205 aa3.81□□□□□ -1.8
VHS3YOR054C UPC2Q12151 913 aa3.81□□□□□ -1.8
VHS3YOR054C RRI1Q12468 440 aa3.81□□□□□ -1.8
VHS3YOR054C HEM2P05373 342 aa3.8□□□□□ -1.8
VHS3YOR054C ADH3P07246 375 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C ATP5P09457 212 aa3.8□□□□□ -1.8
VHS3YOR054C SAM1P10659 382 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C SPO7P18410 259 aa3.8□□□□□ -1.8
VHS3YOR054C TRX2P22803 104 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C PRE8P23639 250 aa3.8□□□□□ -1.8
VHS3YOR054C ATG15P25641 520 aa3.8□□□□□ -1.8
VHS3YOR054C PRE4P30657 266 aa3.8□□□□□ -1.8
VHS3YOR054C OAC1P32332 324 aa3.8□□□□□ -1.8
VHS3YOR054C SPS19P32573 292 aaKnown RBP3.8□□□□□ -1.8
VHS3YOR054C AIM26P32858 118 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms