RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W RPL24BP24000 155 aaKnown RBP3.46□□□□□ -1.85
ROD1YOR018W HSP30P25619 332 aa3.46□□□□□ -1.85
ROD1YOR018W MDH3P32419 343 aaKnown RBP RIP-Chip data3.46□□□□□ -1.85not detected
ROD1YOR018W EXO84P38261 753 aa3.46□□□□□ -1.85
ROD1YOR018W GRE3P38715 327 aaKnown RBP RIP-Chip data3.46□□□□□ -1.85not detected
ROD1YOR018W GOS1P38736 223 aa3.46□□□□□ -1.85
ROD1YOR018W STB1P42845 420 aa3.46□□□□□ -1.85
ROD1YOR018W RET2P43621 546 aa3.46□□□□□ -1.85
ROD1YOR018W YGR066CP53242 292 aa3.46□□□□□ -1.85
ROD1YOR018W COG5P53951 403 aa3.46□□□□□ -1.85
ROD1YOR018W ASI3P53983 676 aa3.46□□□□□ -1.85
ROD1YOR018W TMA20P89886 181 aaPredicted RBP3.46□□□□□ -1.85
ROD1YOR018W ABZ2Q03266 374 aa3.46□□□□□ -1.85
ROD1YOR018W FIN1Q03898 291 aa3.46□□□□□ -1.85
ROD1YOR018W VID22Q05934 901 aa3.46□□□□□ -1.85
ROD1YOR018W NMA1Q06178 401 aaKnown RBP3.46□□□□□ -1.85
ROD1YOR018W ATG33Q06485 197 aa3.46□□□□□ -1.85
ROD1YOR018W RRG7Q08774 242 aaPredicted RBP3.46□□□□□ -1.85
ROD1YOR018W YOR376WQ08900 122 aa3.46□□□□□ -1.85
ROD1YOR018W TPO4Q12256 659 aa3.46□□□□□ -1.85
ROD1YOR018W RIP1P08067 215 aa3.46□□□□□ -1.86
ROD1YOR018W DPB2P24482 689 aaPredicted RBP3.46□□□□□ -1.86
ROD1YOR018W NAM9P27929 486 aa3.46□□□□□ -1.86
ROD1YOR018W YOR062CP36025 268 aa3.46□□□□□ -1.86
ROD1YOR018W YBR063CP38083 404 aa3.46□□□□□ -1.86
ROD1YOR018W ARN2P38724 620 aa3.46□□□□□ -1.86
ROD1YOR018W PEX18P38855 283 aa3.46□□□□□ -1.86
ROD1YOR018W YER158CP40095 573 aa3.46□□□□□ -1.86
ROD1YOR018W IKS1P47042 667 aa3.46□□□□□ -1.86
ROD1YOR018W YJR096WP47137 282 aa3.46□□□□□ -1.86
ROD1YOR018W SAY1P53324 424 aa3.46□□□□□ -1.86
ROD1YOR018W SNP1Q00916 300 aaPredicted RBP3.46□□□□□ -1.86
ROD1YOR018W YMR210WQ03649 449 aa3.46□□□□□ -1.86
ROD1YOR018W LRS4Q04087 347 aaKnown RBP3.46□□□□□ -1.86
ROD1YOR018W YMR252CQ04814 134 aa3.46□□□□□ -1.86
ROD1YOR018W YOR378WQ08902 515 aa3.46□□□□□ -1.86
ROD1YOR018W YPL272CQ08984 517 aa3.46□□□□□ -1.86
ROD1YOR018W YDL177CQ12257 170 aa3.46□□□□□ -1.86
ROD1YOR018W SWM1Q12379 170 aa3.46□□□□□ -1.86
ROD1YOR018W DET1Q99288 334 aaKnown RBP3.46□□□□□ -1.86
ROD1YOR018W TAD3Q9URQ3 322 aa3.46□□□□□ -1.86
ROD1YOR018W BLM10P43583 2143 aa3.46□□□□□ -1.86
ROD1YOR018W PPA2P28239 310 aa3.45□□□□□ -1.86
ROD1YOR018W YHR180WP38868 163 aa3.45□□□□□ -1.86
ROD1YOR018W CUP9P41817 306 aa3.45□□□□□ -1.86
ROD1YOR018W SHR5P41912 237 aa3.45□□□□□ -1.86
ROD1YOR018W DML1Q03652 475 aa3.45□□□□□ -1.86
ROD1YOR018W NUP53Q03790 475 aa3.45□□□□□ -1.86
ROD1YOR018W MGR3Q04472 501 aa3.45□□□□□ -1.86
ROD1YOR018W YLR173WQ06247 608 aa3.45□□□□□ -1.86
ROD1YOR018W TAZ1Q06510 381 aa3.45□□□□□ -1.86
ROD1YOR018W SSK1Q07084 712 aa3.45□□□□□ -1.86
ROD1YOR018W YOR389WQ08912 624 aa3.45□□□□□ -1.86
ROD1YOR018W TRM10Q12400 293 aa3.45□□□□□ -1.86
ROD1YOR018W YBR182C-AQ8TGU6 64 aa3.45□□□□□ -1.86
ROD1YOR018W RPN13O13563 156 aa3.45□□□□□ -1.86
ROD1YOR018W HMG1P12683 1054 aa3.45□□□□□ -1.86
ROD1YOR018W CPR3P25719 182 aa3.45□□□□□ -1.86
ROD1YOR018W RPS5P26783 225 aaKnown RBP3.45□□□□□ -1.86
ROD1YOR018W PMT2P31382 759 aa3.45□□□□□ -1.86
ROD1YOR018W PDR3P33200 976 aa3.45□□□□□ -1.86
ROD1YOR018W COS9P36034 407 aa3.45□□□□□ -1.86
ROD1YOR018W MAL32P38158 584 aa3.45□□□□□ -1.86
ROD1YOR018W SHE1P38200 338 aa3.45□□□□□ -1.86
ROD1YOR018W APD1P38281 316 aa3.45□□□□□ -1.86
ROD1YOR018W YHR035WP38769 630 aa3.45□□□□□ -1.86
ROD1YOR018W MDM31P38880 579 aa3.45□□□□□ -1.86
ROD1YOR018W CHL4P38907 458 aa3.45□□□□□ -1.86
ROD1YOR018W HRB1P38922 454 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
ROD1YOR018W ISC1P40015 477 aaKnown RBP3.45□□□□□ -1.86
ROD1YOR018W FMC1P40491 155 aa3.45□□□□□ -1.86
ROD1YOR018W RPE1P46969 238 aa3.45□□□□□ -1.86
ROD1YOR018W AAD10P47182 288 aa3.45□□□□□ -1.86
ROD1YOR018W MAL12P53341 584 aa3.45□□□□□ -1.86
ROD1YOR018W BUD17P53727 317 aa3.45□□□□□ -1.86
ROD1YOR018W YLR460CP54007 376 aa3.45□□□□□ -1.86
ROD1YOR018W YSA1Q01976 231 aa3.45□□□□□ -1.86
ROD1YOR018W YMR087WQ04299 284 aa3.45□□□□□ -1.86
ROD1YOR018W COX20Q04935 205 aa3.45□□□□□ -1.86
ROD1YOR018W RRP9Q06506 573 aaKnown RBP3.45□□□□□ -1.86
ROD1YOR018W RSC58Q07979 502 aa3.45□□□□□ -1.86
ROD1YOR018W TFS1P14306 219 aa3.44□□□□□ -1.86
ROD1YOR018W RAD51P25454 400 aa3.44□□□□□ -1.86
ROD1YOR018W VMA6P32366 345 aaKnown RBP3.44□□□□□ -1.86
ROD1YOR018W ECM15P35195 104 aa3.44□□□□□ -1.86
ROD1YOR018W RPS20P38701 121 aaKnown RBP3.44□□□□□ -1.86
ROD1YOR018W CHA4P43634 648 aa3.44□□□□□ -1.86
ROD1YOR018W SSY5P47002 699 aa3.44□□□□□ -1.86
ROD1YOR018W APS3P47064 194 aa3.44□□□□□ -1.86
ROD1YOR018W OCA1P50946 238 aaPredicted RBP3.44□□□□□ -1.86
ROD1YOR018W MIX14Q04341 121 aa3.44□□□□□ -1.86
ROD1YOR018W ARP10Q04549 284 aa3.44□□□□□ -1.86
ROD1YOR018W MDM30Q05930 598 aa3.44□□□□□ -1.86
ROD1YOR018W ATG17Q06410 417 aa3.44□□□□□ -1.86
ROD1YOR018W UIP4Q08926 304 aa3.44□□□□□ -1.86
ROD1YOR018W MDM32Q12171 622 aa3.44□□□□□ -1.86
ROD1YOR018W HMS1Q12398 434 aa3.44□□□□□ -1.86
ROD1YOR018W GAS1P22146 559 aaKnown RBP3.44□□□□□ -1.86
ROD1YOR018W RPC82P32349 654 aa3.44□□□□□ -1.86
ROD1YOR018W DAL3P32459 195 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms