RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS2	YOL047C	ARO7	P32178	256 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	CDC5	P32562	705 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	MGM101	P32787	269 aa	Known RBP	3.36	□□□□□ -1.87
LDS2	YOL047C	EMP70	P32802	667 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	AVT5	P38176	459 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	ICS2	P38284	255 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	RCK1	P38622	512 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	NSG1	P38837	291 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	IKI1	P38874	309 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	GPI16	P38875	610 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	ELO1	P39540	310 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	ISC1	P40015	477 aa	Known RBP	3.36	□□□□□ -1.87
LDS2	YOL047C	VRG4	P40107	337 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	AGE2	P40529	298 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	YIL024C	P40543	189 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	OPT1	P40897	799 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	PTR3	P43606	678 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	ASG7	P46993	209 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	MSY1	P48527	492 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	ERV14	P53173	138 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	YGR126W	P53274	230 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	OKP1	P53298	406 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	GIM3	P53900	129 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	LSM7	P53905	115 aa	Known RBP	3.36	□□□□□ -1.87
LDS2	YOL047C	ALG11	P53954	548 aa	Known RBP	3.36	□□□□□ -1.87
LDS2	YOL047C	YCL001W-A	P87012	153 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	PRP38	Q00723	242 aa	Predicted RBP	3.36	□□□□□ -1.87
LDS2	YOL047C	STP1	Q00947	519 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	TIM44	Q01852	431 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	GRX5	Q02784	150 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	IRC4	Q03036	179 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	MAK3	Q03503	176 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	GAS3	Q03655	524 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	CDC123	Q05791	360 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	MDM30	Q05930	598 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	YPR091C	Q06833	770 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	YDL242W	Q07746	117 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	YOR283W	Q12040	230 aa	Known RBP	3.36	□□□□□ -1.87
LDS2	YOL047C	SPO24	Q3E752	67 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	YBR255C-A	Q3E776	120 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	MTR10	Q99189	972 aa		3.36	□□□□□ -1.87
LDS2	YOL047C	THP2	O13539	261 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	COX3	P00420	269 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	CDC36	P06100	191 aa	Predicted RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	CBP6	P07253	162 aa	Predicted RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	SAM1	P10659	382 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	TCP1	P12612	559 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	CKS1	P20486	150 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	DAL81	P21657	970 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	NAM9	P27929	486 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	GAC1	P28006	793 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	CTS1	P29029	562 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	PMI40	P29952	429 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	LDS1	P31379	325 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	VMA5	P31412	392 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	SRB6	P32570	121 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	SUA5	P32579	426 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	not detected
LDS2	YOL047C	PDC2	P32896	925 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	ASC1	P38011	319 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	COS8	P38723	381 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	RTC3	P38804	111 aa	Predicted RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	ANS1	P38832	159 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	YMR144W	P40214	342 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	UTP25	P40498	721 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	DPB11	P47027	764 aa	Predicted RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	YJL016W	P47072	561 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	RPS12	P48589	143 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	MUP1	P50276	574 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	AIF1	P52923	378 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	DOC1	P53068	250 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	YIP4	P53093	235 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	TIM21	P53220	239 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	RTT102	P53330	157 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	YNL092W	P53934	400 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	LSM3	P57743	89 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	TDA1	Q03533	586 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	ATC1	Q04005	294 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	RTN1	Q04947	295 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	DUS4	Q06063	367 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	GAS2	Q06135	555 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	RAD34	Q06665	692 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	CDA2	Q06703	312 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	PUS9	Q12069	462 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	USV1	Q12132	391 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	PKH2	Q12236	1081 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	YLR108C	Q12259	485 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	INP53	Q12271	1107 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	WTM1	Q12363	437 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	HMS1	Q12398	434 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	LPX1	Q12405	387 aa	Known RBP	3.35	□□□□□ -1.87
LDS2	YOL047C	ZPS1	Q12512	249 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	MHF2	Q3E829	80 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	Q0010	Q9ZZX9	128 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	YRF1-3	P0CX14	1859 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	YRF1-7	P0CX15	1859 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	YRF1-6	P53819	1859 aa		3.35	□□□□□ -1.87
LDS2	YOL047C	RIM15	P43565	1770 aa		3.34	□□□□□ -1.87
LDS2	YOL047C	ADE4	P04046	510 aa	Known RBP	3.34	□□□□□ -1.87
LDS2	YOL047C	RAD52	P06778	471 aa	Known RBP	3.34	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms