RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	MKK1	P32490	508 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	GCG1	P32656	232 aa	Known RBP	0.22	□□□□□ -2.37
RCO1	YMR075W	ZRT1	P32804	376 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	MDL1	P33310	695 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.22	□□□□□ -2.37	not detected
RCO1	YMR075W	MBA1	P38300	278 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	YHR045W	P38775	560 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	APE4	P38821	490 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	LCB2	P40970	561 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	FYV8	P46949	817 aa	Known RBP	0.22	□□□□□ -2.37
RCO1	YMR075W	KEL2	P50090	882 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	NBP1	P52919	319 aa	Predicted RBP	0.22	□□□□□ -2.37
RCO1	YMR075W	MIG2	P53035	382 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	LST7	P53237	242 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	RET3	P53600	189 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	MEH1	Q02205	184 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	YMR209C	Q03648	457 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	MYO5	Q04439	1219 aa	Known RBP	0.22	□□□□□ -2.37
RCO1	YMR075W	MRX9	Q07349	420 aa	Known RBP	0.22	□□□□□ -2.37
RCO1	YMR075W	GAT3	Q07928	141 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	SLD7	Q08457	257 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	YPL278C	Q08990	100 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	TIM22	Q12328	207 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	DFM1	Q12743	341 aa	Known RBP	0.22	□□□□□ -2.37
RCO1	YMR075W	BOL1	Q3E793	110 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	ISD11	Q6Q560	94 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	LAG2	Q92325	660 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	PUT1	P09368	476 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	OSM1	P21375	501 aa	Known RBP	0.22	□□□□□ -2.38
RCO1	YMR075W	HXT2	P23585	541 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	SCO1	P23833	295 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	CHA1	P25379	360 aa	Known RBP	0.22	□□□□□ -2.38
RCO1	YMR075W	DCC1	P25559	380 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	ICL1	P28240	557 aa	Predicted RBP	0.22	□□□□□ -2.38
RCO1	YMR075W	MSP1	P28737	362 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	PSO2	P30620	661 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	ARO4	P32449	370 aa	Known RBP	0.22	□□□□□ -2.38
RCO1	YMR075W	VMA8	P32610	256 aa	Known RBP	0.22	□□□□□ -2.38
RCO1	YMR075W	SDH4	P37298	181 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	YHL026C	P38740	315 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	YHI9	P38765	294 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	MED6	P38782	295 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	ATG7	P38862	630 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	CAJ1	P39101	391 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	SER3	P40054	469 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	AVT6	P40074	448 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	JEM1	P40358	645 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	SEC28	P40509	296 aa	Known RBP	0.22	□□□□□ -2.38
RCO1	YMR075W	YCH1	P42937	148 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	YFL064C	P43540	174 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	YFR045W	P43617	309 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	ABM1	P47146	123 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	EFM3	P47163	339 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	TCB2	P48231	1178 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	YML6	P51998	286 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	TAF6	P53040	516 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	ERG25	P53045	309 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	LSG1	P53145	640 aa	Known RBP	0.22	□□□□□ -2.38
RCO1	YMR075W	LIF1	P53150	421 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	SDS23	P53172	527 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	RRN9	P53437	365 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	YNR062C	P53748	327 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	SWT21	P53873	357 aa	Predicted RBP	0.22	□□□□□ -2.38
RCO1	YMR075W	YNL095C	P53932	642 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	RVB1	Q03940	463 aa	Known RBP	0.22	□□□□□ -2.38
RCO1	YMR075W	NAT4	Q04751	285 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	DXO1	Q06349	442 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	DIB1	Q06819	143 aa	Predicted RBP	0.22	□□□□□ -2.38
RCO1	YMR075W	RDS3	Q06835	107 aa	Predicted RBP	0.22	□□□□□ -2.38
RCO1	YMR075W	FEX1	Q08913	375 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	FEX2	Q08991	375 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	RPN5	Q12250	445 aa	Known RBP	0.22	□□□□□ -2.38
RCO1	YMR075W	PRR2	Q12310	699 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	PST1	Q12355	444 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	ERP3	Q12403	225 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	PAR32	Q12515	295 aa	Known RBP	0.22	□□□□□ -2.38
RCO1	YMR075W	YOL085C	Q99345	113 aa		0.22	□□□□□ -2.38
RCO1	YMR075W	RAD7	P06779	565 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	RNR2	P09938	399 aa	Known RBP	0.21	□□□□□ -2.38
RCO1	YMR075W	RPL1A	P0CX43	217 aa	Known RBP	0.21	□□□□□ -2.38
RCO1	YMR075W	RPL1B	P0CX44	217 aa	Known RBP	0.21	□□□□□ -2.38
RCO1	YMR075W	DAP2	P18962	818 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	CKI1	P20485	582 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	UTR1	P21373	530 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	DAL81	P21657	970 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	DBR1	P24309	405 aa	Known RBP	0.21	□□□□□ -2.38
RCO1	YMR075W	CAM1	P29547	415 aa	Known RBP	0.21	□□□□□ -2.38
RCO1	YMR075W	PMT2	P31382	759 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	KRE6	P32486	720 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	VAM7	P32912	316 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	MRPS5	P33759	307 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	DAD2	P36162	133 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	YHR035W	P38769	630 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	SPL2	P38839	148 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	PRP39	P39682	629 aa	Known RBP	0.21	□□□□□ -2.38
RCO1	YMR075W	DSE1	P40077	573 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	YMR134W	P40207	237 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	BTT1	P40314	149 aa	Predicted RBP	0.21	□□□□□ -2.38
RCO1	YMR075W	YIL089W	P40500	205 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	PMT4	P46971	762 aa		0.21	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms