RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W SEC12P11655 471 aa3.52□□□□□ -1.85
USA1YML029W UTR1P21373 530 aa3.52□□□□□ -1.85
USA1YML029W AIM17P23180 465 aaKnown RBP3.52□□□□□ -1.85
USA1YML029W SCO1P23833 295 aa3.52□□□□□ -1.85
USA1YML029W BUD5P25300 642 aaPredicted RBP3.52□□□□□ -1.85
USA1YML029W NAM9P27929 486 aa3.52□□□□□ -1.85
USA1YML029W MAE1P36013 669 aaKnown RBP3.52□□□□□ -1.85
USA1YML029W KAE1P36132 386 aa3.52□□□□□ -1.85
USA1YML029W SRO77P38163 1010 aa3.52□□□□□ -1.85
USA1YML029W YBR096WP38256 230 aa3.52□□□□□ -1.85
USA1YML029W AST2P39945 430 aaKnown RBP3.52□□□□□ -1.85
USA1YML029W AVT6P40074 448 aa3.52□□□□□ -1.85
USA1YML029W PGU1P47180 361 aa3.52□□□□□ -1.85
USA1YML029W SKP1P52286 194 aa3.52□□□□□ -1.85
USA1YML029W SRP1Q02821 542 aaKnown RBP3.52□□□□□ -1.85
USA1YML029W INP1Q03694 420 aa3.52□□□□□ -1.85
USA1YML029W YLR345WQ06137 509 aa3.52□□□□□ -1.85
USA1YML029W NIP7Q08962 181 aaKnown RBP3.52□□□□□ -1.85
USA1YML029W PST2Q12335 198 aaKnown RBP3.52□□□□□ -1.85
USA1YML029W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
USA1YML029W DFG16Q99234 619 aa3.52□□□□□ -1.85
USA1YML029W GLT1Q12680 2145 aaKnown RBP3.52□□□□□ -1.85
USA1YML029W YOL162WP0CF19 215 aa3.51□□□□□ -1.85
USA1YML029W PDX1P16451 410 aa3.51□□□□□ -1.85
USA1YML029W SAP30P38429 201 aa3.51□□□□□ -1.85
USA1YML029W APE4P38821 490 aa3.51□□□□□ -1.85
USA1YML029W IPT1P38954 527 aa3.51□□□□□ -1.85
USA1YML029W GDI1P39958 451 aaKnown RBP3.51□□□□□ -1.85
USA1YML029W RRG9P40156 214 aa3.51□□□□□ -1.85
USA1YML029W HIS6P40545 261 aa3.51□□□□□ -1.85
USA1YML029W CIN1P40987 1014 aa3.51□□□□□ -1.85
USA1YML029W SWP82P43554 623 aa3.51□□□□□ -1.85
USA1YML029W ECO1P43605 281 aa3.51□□□□□ -1.85
USA1YML029W HMS2P47175 358 aa3.51□□□□□ -1.85
USA1YML029W MRPL19P53875 158 aa3.51□□□□□ -1.85
USA1YML029W YKR011CQ02209 353 aa3.51□□□□□ -1.85
USA1YML029W PET191Q02772 108 aa3.51□□□□□ -1.85
USA1YML029W YMD8Q03697 442 aa3.51□□□□□ -1.85
USA1YML029W RVB1Q03940 463 aaKnown RBP3.51□□□□□ -1.85
USA1YML029W YDR179W-AQ03983 463 aa3.51□□□□□ -1.85
USA1YML029W SNO4Q04902 237 aa3.51□□□□□ -1.85
USA1YML029W HRI1Q05905 244 aaKnown RBP3.51□□□□□ -1.85
USA1YML029W ARV1Q06541 321 aa3.51□□□□□ -1.85
USA1YML029W HSP33Q08914 237 aaKnown RBP3.51□□□□□ -1.85
USA1YML029W UIP4Q08926 304 aa3.51□□□□□ -1.85
USA1YML029W HSP32Q08992 237 aa3.51□□□□□ -1.85
USA1YML029W ACF2Q12168 779 aa3.51□□□□□ -1.85
USA1YML029W RLM1Q12224 676 aa3.51□□□□□ -1.85
USA1YML029W TRM10Q12400 293 aa3.51□□□□□ -1.85
USA1YML029W PRP46Q12417 451 aaPredicted RBP3.51□□□□□ -1.85
USA1YML029W TAL1P15019 335 aaKnown RBP3.51□□□□□ -1.85
USA1YML029W SAC7P17121 654 aa3.51□□□□□ -1.85
USA1YML029W SNF6P18888 332 aa3.51□□□□□ -1.85
USA1YML029W PHO80P20052 293 aa3.51□□□□□ -1.85
USA1YML029W KRR1P25586 316 aaPredicted RBP3.51□□□□□ -1.85
USA1YML029W SUR1P33300 382 aa3.51□□□□□ -1.85
USA1YML029W SPC29P33419 253 aa3.51□□□□□ -1.85
USA1YML029W DHR2P36009 735 aaPredicted RBP3.51□□□□□ -1.85
USA1YML029W SBE22P38814 852 aa3.51□□□□□ -1.85
USA1YML029W KRE29P40026 464 aa3.51□□□□□ -1.85
USA1YML029W YNL195CP40168 261 aa3.51□□□□□ -1.85
USA1YML029W MPA43P53583 542 aaPredicted RBP3.51□□□□□ -1.85
USA1YML029W BSC5P53755 489 aa3.51□□□□□ -1.85
USA1YML029W ATG21Q02887 496 aa3.51□□□□□ -1.85
USA1YML029W IRC19Q07843 230 aa3.51□□□□□ -1.85
USA1YML029W CRT10Q08226 957 aa3.51□□□□□ -1.85
USA1YML029W SKI7Q08491 747 aaPredicted RBP3.51□□□□□ -1.85
USA1YML029W YOR289WQ12012 251 aaPredicted RBP3.51□□□□□ -1.85
USA1YML029W CUP1-1P0CX80 61 aa3.5□□□□□ -1.85
USA1YML029W CUP1-2P0CX81 61 aa3.5□□□□□ -1.85
USA1YML029W SAM35P14693 329 aa3.5□□□□□ -1.85
USA1YML029W PRP28P23394 588 aa3.5□□□□□ -1.85
USA1YML029W VMA6P32366 345 aaKnown RBP3.5□□□□□ -1.85
USA1YML029W TIM12P32830 109 aa3.5□□□□□ -1.85
USA1YML029W SEF1P34228 1148 aa3.5□□□□□ -1.85
USA1YML029W YKR015CP36111 568 aa3.5□□□□□ -1.85
USA1YML029W ECM4P36156 370 aa3.5□□□□□ -1.85
USA1YML029W VBA2P38358 474 aaKnown RBP3.5□□□□□ -1.85
USA1YML029W SNO3P43544 222 aa3.5□□□□□ -1.85
USA1YML029W RET2P43621 546 aa3.5□□□□□ -1.85
USA1YML029W RPE1P46969 238 aa3.5□□□□□ -1.85
USA1YML029W UBX6P47049 396 aa3.5□□□□□ -1.85
USA1YML029W GRX5Q02784 150 aa3.5□□□□□ -1.85
USA1YML029W MRPL51Q06090 140 aaPredicted RBP3.5□□□□□ -1.85
USA1YML029W FMP45Q07651 309 aa3.5□□□□□ -1.85
USA1YML029W GRC3Q07845 632 aa3.5□□□□□ -1.85
USA1YML029W RRG7Q08774 242 aaPredicted RBP3.5□□□□□ -1.85
USA1YML029W MDM32Q12171 622 aa3.5□□□□□ -1.85
USA1YML029W MET17P06106 444 aa3.5□□□□□ -1.85
USA1YML029W CBP6P07253 162 aaPredicted RBP3.5□□□□□ -1.85
USA1YML029W NCP1P16603 691 aaKnown RBP3.5□□□□□ -1.85
USA1YML029W YCR100CP25606 316 aa3.5□□□□□ -1.85
USA1YML029W RPS5P26783 225 aaKnown RBP3.5□□□□□ -1.85
USA1YML029W ATS1P31386 333 aa3.5□□□□□ -1.85
USA1YML029W OAC1P32332 324 aa3.5□□□□□ -1.85
USA1YML029W FMP23P38231 175 aa3.5□□□□□ -1.85
USA1YML029W RIX1P38883 763 aaPredicted RBP3.5□□□□□ -1.85
USA1YML029W YER010CP40011 234 aa3.5□□□□□ -1.85
USA1YML029W MNT4P53745 580 aa3.5□□□□□ -1.85
USA1YML029W COS1P53822 381 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms