RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene BLS1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLS1YLR408C LOC1P43586 204 aaPredicted RBP3.41□□□□□ -1.86
BLS1YLR408C MIC19P43594 170 aa3.41□□□□□ -1.86
BLS1YLR408C OKP1P53298 406 aa3.41□□□□□ -1.86
BLS1YLR408C INP1Q03694 420 aa3.41□□□□□ -1.86
BLS1YLR408C ECM19Q06011 112 aa3.41□□□□□ -1.86
BLS1YLR408C DFM1Q12743 341 aaKnown RBP3.41□□□□□ -1.86
BLS1YLR408C YHR035WP38769 630 aa3.4□□□□□ -1.87
BLS1YLR408C END3P39013 349 aa3.4□□□□□ -1.87
BLS1YLR408C IRC4Q03036 179 aa3.4□□□□□ -1.87
BLS1YLR408C ABZ2Q03266 374 aa3.4□□□□□ -1.87
BLS1YLR408C UTP15Q04305 513 aaKnown RBP3.4□□□□□ -1.87
BLS1YLR408C GMC1Q04399 608 aa3.4□□□□□ -1.87
BLS1YLR408C YLR297WQ05899 129 aa3.4□□□□□ -1.87
BLS1YLR408C CUR1Q06469 252 aa3.4□□□□□ -1.87
BLS1YLR408C STF1P01098 86 aa3.39□□□□□ -1.87
BLS1YLR408C ZRT3P34240 503 aa3.39□□□□□ -1.87
BLS1YLR408C PRY2P36110 329 aa3.39□□□□□ -1.87
BLS1YLR408C PET8P38921 284 aa3.39□□□□□ -1.87
BLS1YLR408C SOP4P39543 234 aaPredicted RBP3.39□□□□□ -1.87
BLS1YLR408C DSE1P40077 573 aa3.39□□□□□ -1.87
BLS1YLR408C OSW5P40219 148 aa3.39□□□□□ -1.87
BLS1YLR408C PFS2P42841 465 aaKnown RBP3.39□□□□□ -1.87
BLS1YLR408C RIB4P50861 169 aaPredicted RBP3.39□□□□□ -1.87
BLS1YLR408C FMP48P53233 369 aa3.39□□□□□ -1.87
BLS1YLR408C APJ1P53940 528 aa3.39□□□□□ -1.87
BLS1YLR408C YMR244WQ04018 355 aa3.39□□□□□ -1.87
BLS1YLR408C YPL245WQ12179 454 aaKnown RBP3.39□□□□□ -1.87
BLS1YLR408C GCD2P12754 651 aaPredicted RBP3.38□□□□□ -1.87
BLS1YLR408C RPB9P27999 122 aa3.38□□□□□ -1.87
BLS1YLR408C SKG6P32900 734 aaPredicted RBP3.38□□□□□ -1.87
BLS1YLR408C CTM1P38818 585 aa3.38□□□□□ -1.87
BLS1YLR408C FET3P38993 636 aa3.38□□□□□ -1.87
BLS1YLR408C BDH1P39714 382 aa3.38□□□□□ -1.87
BLS1YLR408C HIT1P46973 164 aa3.38□□□□□ -1.87
BLS1YLR408C DBP6P53734 629 aaKnown RBP3.38□□□□□ -1.87
BLS1YLR408C ZRG17P53735 605 aa3.38□□□□□ -1.87
BLS1YLR408C VTI1Q04338 217 aa3.38□□□□□ -1.87
BLS1YLR408C SLX1P38324 304 aa3.37□□□□□ -1.87
BLS1YLR408C MNN9P39107 395 aaKnown RBP3.37□□□□□ -1.87
BLS1YLR408C YIR035CP40579 254 aa3.37□□□□□ -1.87
BLS1YLR408C LOH1P47055 219 aa3.37□□□□□ -1.87
BLS1YLR408C YNR066CP53752 436 aa3.37□□□□□ -1.87
BLS1YLR408C SMD1Q02260 146 aaPredicted RBP3.37□□□□□ -1.87
BLS1YLR408C SNX41Q04053 625 aa3.37□□□□□ -1.87
BLS1YLR408C SAM4Q08985 325 aaKnown RBP3.37□□□□□ -1.87
BLS1YLR408C TRM10Q12400 293 aa3.37□□□□□ -1.87
BLS1YLR408C BI3Q9ZZW7 517 aa3.37□□□□□ -1.87
BLS1YLR408C FLO11P08640 1367 aa3.37□□□□□ -1.87
BLS1YLR408C MCH2P36032 473 aa3.36□□□□□ -1.87
BLS1YLR408C PES4P39684 611 aa3.36□□□□□ -1.87
BLS1YLR408C SLM1P40485 686 aa3.36□□□□□ -1.87
BLS1YLR408C COS4P43542 379 aa3.36□□□□□ -1.87
BLS1YLR408C YPL080CQ02826 108 aa3.36□□□□□ -1.87
BLS1YLR408C YDL211CQ12121 372 aa3.36□□□□□ -1.87
BLS1YLR408C CCH1P50077 2039 aa3.36□□□□□ -1.87
BLS1YLR408C ERD1P16151 362 aa3.35□□□□□ -1.87
BLS1YLR408C MRPL20P22354 195 aaPredicted RBP3.35□□□□□ -1.87
BLS1YLR408C ZRT1P32804 376 aa3.35□□□□□ -1.87
BLS1YLR408C ACT1P60010 375 aaKnown RBP3.35□□□□□ -1.87
BLS1YLR408C YLR446WQ06204 433 aa3.35□□□□□ -1.87
BLS1YLR408C PRM7Q12459 698 aa3.35□□□□□ -1.87
BLS1YLR408C DCP1Q12517 231 aaPredicted RBP3.35□□□□□ -1.87
BLS1YLR408C CAR2P07991 424 aaKnown RBP3.34□□□□□ -1.87
BLS1YLR408C CUP2P15315 225 aa3.34□□□□□ -1.87
BLS1YLR408C CPT1P17898 393 aa3.34□□□□□ -1.87
BLS1YLR408C SAR1P20606 190 aaKnown RBP3.34□□□□□ -1.87
BLS1YLR408C AGA2P32781 87 aa3.34□□□□□ -1.87
BLS1YLR408C YMR262WP38430 313 aa3.34□□□□□ -1.87
BLS1YLR408C YIL054WP40524 105 aa3.34□□□□□ -1.87
BLS1YLR408C CPR7P47103 393 aa3.34□□□□□ -1.87
BLS1YLR408C BIO4P53630 237 aa3.34□□□□□ -1.87
BLS1YLR408C RRG8Q06109 277 aa3.34□□□□□ -1.87
BLS1YLR408C VAC14Q06708 880 aa3.34□□□□□ -1.87
BLS1YLR408C MDY2Q12285 212 aa3.34□□□□□ -1.87
BLS1YLR408C UTP23Q12339 254 aaKnown RBP3.34□□□□□ -1.87
BLS1YLR408C YPR1Q12458 312 aa3.34□□□□□ -1.87
BLS1YLR408C COX16P47081 118 aa3.33□□□□□ -1.88
BLS1YLR408C VOA1P53262 265 aa3.33□□□□□ -1.88
BLS1YLR408C YPR195CQ06594 109 aa3.33□□□□□ -1.88
BLS1YLR408C YOR292CQ08743 309 aa3.33□□□□□ -1.88
BLS1YLR408C PFK27Q12471 397 aaPredicted RBP3.33□□□□□ -1.88
BLS1YLR408C RPL5P26321 297 aaKnown RBP3.32□□□□□ -1.88
BLS1YLR408C VPH2P32341 215 aa3.32□□□□□ -1.88
BLS1YLR408C ASP1P38986 381 aaPredicted RBP3.32□□□□□ -1.88
BLS1YLR408C UBC13P52490 153 aa3.32□□□□□ -1.88
BLS1YLR408C YGL118CP53132 145 aa3.32□□□□□ -1.88
BLS1YLR408C PBP4Q07362 185 aaKnown RBP3.32□□□□□ -1.88
BLS1YLR408C APC9Q12107 265 aa3.32□□□□□ -1.88
BLS1YLR408C ERP3Q12403 225 aa3.32□□□□□ -1.88
BLS1YLR408C TFC7Q12415 435 aa3.32□□□□□ -1.88
BLS1YLR408C PRP46Q12417 451 aaPredicted RBP3.32□□□□□ -1.88
BLS1YLR408C TDH3P00359 332 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
BLS1YLR408C AST1P35183 429 aa3.31□□□□□ -1.88
BLS1YLR408C GPX1P36014 167 aa3.31□□□□□ -1.88
BLS1YLR408C MPP10P47083 593 aaKnown RBP3.31□□□□□ -1.88
BLS1YLR408C CAX4P53223 239 aa3.31□□□□□ -1.88
BLS1YLR408C YMR111CQ04461 462 aaPredicted RBP3.31□□□□□ -1.88
BLS1YLR408C VIK1Q12045 647 aa3.31□□□□□ -1.88
BLS1YLR408C SIA1Q12212 622 aa3.31□□□□□ -1.88
BLS1YLR408C IZH4Q99393 312 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms