RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W THI7Q05998 598 aa2.3□□□□□ -2.04
TRM2YKR056W RDL2Q08742 149 aaKnown RBP2.3□□□□□ -2.04
TRM2YKR056W DDC1Q08949 612 aa2.3□□□□□ -2.04
TRM2YKR056W TIP41Q12199 356 aa2.3□□□□□ -2.04
TRM2YKR056W YCL012CQ8J0M4 134 aa2.3□□□□□ -2.04
TRM2YKR056W HIS1P00498 297 aaKnown RBP2.29□□□□□ -2.04
TRM2YKR056W RPS14AP06367 137 aaKnown RBP2.29□□□□□ -2.04
TRM2YKR056W NHP6BP11633 99 aaKnown RBP2.29□□□□□ -2.04
TRM2YKR056W PEX3P28795 441 aa2.29□□□□□ -2.04
TRM2YKR056W PRP18P33411 251 aaPredicted RBP2.29□□□□□ -2.04
TRM2YKR056W CBT1P36038 271 aaPredicted RBP2.29□□□□□ -2.04
TRM2YKR056W CAB3P36076 571 aa2.29□□□□□ -2.04
TRM2YKR056W ECM4P36156 370 aa2.29□□□□□ -2.04
TRM2YKR056W YBR241CP38142 488 aa2.29□□□□□ -2.04
TRM2YKR056W ATG12P38316 186 aa2.29□□□□□ -2.04
TRM2YKR056W MIC12P38341 106 aa2.29□□□□□ -2.04
TRM2YKR056W PRS2P38620 318 aaKnown RBP2.29□□□□□ -2.04
TRM2YKR056W PET8P38921 284 aa2.29□□□□□ -2.04
TRM2YKR056W RPS14BP39516 138 aaKnown RBP2.29□□□□□ -2.04
TRM2YKR056W SOP4P39543 234 aaPredicted RBP2.29□□□□□ -2.04
TRM2YKR056W ERG28P40030 148 aa2.29□□□□□ -2.04
TRM2YKR056W DDI1P40087 428 aa2.29□□□□□ -2.04
TRM2YKR056W LCB3P47013 409 aa2.29□□□□□ -2.04
TRM2YKR056W JHD2P47156 728 aaPredicted RBP2.29□□□□□ -2.04
TRM2YKR056W SCS3P53012 380 aa2.29□□□□□ -2.04
TRM2YKR056W VHT1P53241 593 aa2.29□□□□□ -2.04
TRM2YKR056W YMR027WQ04371 470 aa2.29□□□□□ -2.04
TRM2YKR056W ERP1Q05359 219 aaKnown RBP2.29□□□□□ -2.04
TRM2YKR056W CDC123Q05791 360 aa2.29□□□□□ -2.04
TRM2YKR056W PLP2Q12017 286 aa2.29□□□□□ -2.04
TRM2YKR056W FCY22Q12119 530 aa2.29□□□□□ -2.04
TRM2YKR056W POM33Q12164 279 aa2.29□□□□□ -2.04
TRM2YKR056W RPL23AP0CX41 137 aaKnown RBP2.29□□□□□ -2.04
TRM2YKR056W RPL23BP0CX42 137 aaKnown RBP2.29□□□□□ -2.04
TRM2YKR056W REV1P12689 985 aa2.29□□□□□ -2.04
TRM2YKR056W TFS1P14306 219 aa2.29□□□□□ -2.04
TRM2YKR056W CPR3P25719 182 aa2.29□□□□□ -2.04
TRM2YKR056W ADE1P27616 306 aa2.29□□□□□ -2.04
TRM2YKR056W FUN26P31381 517 aa2.29□□□□□ -2.04
TRM2YKR056W VMA6P32366 345 aaKnown RBP2.29□□□□□ -2.04
TRM2YKR056W MUD1P32605 298 aaKnown RBP2.29□□□□□ -2.04
TRM2YKR056W CSE1P33307 960 aa2.29□□□□□ -2.04
TRM2YKR056W NAT2P37293 288 aa2.29□□□□□ -2.04
TRM2YKR056W MAL32P38158 584 aa2.29□□□□□ -2.04
TRM2YKR056W SAD1P43589 448 aa2.29□□□□□ -2.04
TRM2YKR056W MDV1P47025 714 aa2.29□□□□□ -2.04
TRM2YKR056W TAD2P47058 250 aa2.29□□□□□ -2.04
TRM2YKR056W VEL1P53058 206 aa2.29□□□□□ -2.04
TRM2YKR056W TPC1P53257 314 aa2.29□□□□□ -2.04
TRM2YKR056W MAL13P53338 473 aa2.29□□□□□ -2.04
TRM2YKR056W MAL12P53341 584 aa2.29□□□□□ -2.04
TRM2YKR056W CTF19Q02732 369 aa2.29□□□□□ -2.04
TRM2YKR056W SCS7Q03529 384 aa2.29□□□□□ -2.04
TRM2YKR056W YHC1Q05900 231 aaKnown RBP2.29□□□□□ -2.04
TRM2YKR056W TMS1Q12116 473 aa2.29□□□□□ -2.04
TRM2YKR056W YGK3Q12222 375 aaPredicted RBP2.29□□□□□ -2.04
TRM2YKR056W YDL199CQ12407 687 aa2.29□□□□□ -2.04
TRM2YKR056W YKL183C-AQ3E765 70 aa2.29□□□□□ -2.04
TRM2YKR056W YDR157WA0A023PZE8 133 aa2.28□□□□□ -2.04
TRM2YKR056W HEM4P06174 275 aa2.28□□□□□ -2.04
TRM2YKR056W RPL20AP0CX23 172 aaKnown RBP2.28□□□□□ -2.04
TRM2YKR056W RPL20BP0CX24 172 aaPredicted RBP2.28□□□□□ -2.04
TRM2YKR056W SPT4P32914 102 aaPredicted RBP2.28□□□□□ -2.04
TRM2YKR056W VPS21P36017 210 aaKnown RBP2.28□□□□□ -2.04
TRM2YKR056W YBR062CP38239 180 aa2.28□□□□□ -2.04
TRM2YKR056W YBR096WP38256 230 aa2.28□□□□□ -2.04
TRM2YKR056W RPH1P39956 796 aa2.28□□□□□ -2.04
TRM2YKR056W YJR085CP47131 105 aaKnown RBP2.28□□□□□ -2.04
TRM2YKR056W CWC23P52868 283 aaPredicted RBP2.28□□□□□ -2.04
TRM2YKR056W TPN1P53099 579 aa2.28□□□□□ -2.04
TRM2YKR056W MRPL50P53724 139 aa2.28□□□□□ -2.04
TRM2YKR056W BNA7Q04066 261 aa2.28□□□□□ -2.04
TRM2YKR056W YPR091CQ06833 770 aa2.28□□□□□ -2.04
TRM2YKR056W SEY1Q99287 776 aa2.28□□□□□ -2.04
TRM2YKR056W RPS8AP0CX39 200 aaKnown RBP2.27□□□□□ -2.05
TRM2YKR056W RPS8BP0CX40 200 aaKnown RBP2.27□□□□□ -2.05
TRM2YKR056W NAM2P11325 894 aa2.27□□□□□ -2.05
TRM2YKR056W YMR31P19955 123 aa2.27□□□□□ -2.05
TRM2YKR056W RPL24BP24000 155 aaKnown RBP2.27□□□□□ -2.05
TRM2YKR056W YCR043CP25361 127 aa2.27□□□□□ -2.05
TRM2YKR056W RPL16BP26785 198 aaKnown RBP2.27□□□□□ -2.05
TRM2YKR056W QRI5P32344 111 aa2.27□□□□□ -2.05
TRM2YKR056W PDC2P32896 925 aa2.27□□□□□ -2.05
TRM2YKR056W MRPL10P36520 322 aa2.27□□□□□ -2.05
TRM2YKR056W YBP1P38315 674 aa2.27□□□□□ -2.05
TRM2YKR056W ARC40P38328 384 aaKnown RBP2.27□□□□□ -2.05
TRM2YKR056W RCK1P38622 512 aa2.27□□□□□ -2.05
TRM2YKR056W RRP3P38712 501 aaKnown RBP2.27□□□□□ -2.05
TRM2YKR056W COX14P39103 70 aa2.27□□□□□ -2.05
TRM2YKR056W DFG10P40526 253 aa2.27□□□□□ -2.05
TRM2YKR056W RPL10P41805 221 aaKnown RBP2.27□□□□□ -2.05
TRM2YKR056W PSA1P41940 361 aaKnown RBP2.27□□□□□ -2.05
TRM2YKR056W YPT32P51996 222 aaKnown RBP2.27□□□□□ -2.05
TRM2YKR056W NBP35P52920 328 aa2.27□□□□□ -2.05
TRM2YKR056W REX2P54964 269 aaKnown RBP2.27□□□□□ -2.05
TRM2YKR056W YMR166CQ03829 368 aa2.27□□□□□ -2.05
TRM2YKR056W YDL114WQ07530 308 aa2.27□□□□□ -2.05
TRM2YKR056W CSM4Q08955 156 aa2.27□□□□□ -2.05
TRM2YKR056W UTP23Q12339 254 aaKnown RBP2.27□□□□□ -2.05
TRM2YKR056W PRM4Q12498 284 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms