RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W COX2P00410 251 aa3.35□□□□□ -1.87
CTK1YKL139W MSF1P08425 469 aa3.35□□□□□ -1.87
CTK1YKL139W AAT2P23542 418 aaKnown RBP3.35□□□□□ -1.87
CTK1YKL139W MCH2P36032 473 aa3.35□□□□□ -1.87
CTK1YKL139W RPC37P36121 282 aa3.35□□□□□ -1.87
CTK1YKL139W YHR045WP38775 560 aa3.35□□□□□ -1.87
CTK1YKL139W PFS1P38872 237 aa3.35□□□□□ -1.87
CTK1YKL139W MIG3P39943 394 aa3.35□□□□□ -1.87
CTK1YKL139W SWC4P53201 476 aa3.35□□□□□ -1.87
CTK1YKL139W YET2Q04210 160 aa3.35□□□□□ -1.87
CTK1YKL139W ARV1Q06541 321 aa3.35□□□□□ -1.87
CTK1YKL139W MRX9Q07349 420 aaKnown RBP3.35□□□□□ -1.87
CTK1YKL139W MED4Q12343 284 aa3.35□□□□□ -1.87
CTK1YKL139W PRM4Q12498 284 aa3.35□□□□□ -1.87
CTK1YKL139W URA10P30402 227 aa3.34□□□□□ -1.87
CTK1YKL139W SWD3P38123 315 aa3.34□□□□□ -1.87
CTK1YKL139W TAE1P38340 232 aa3.34□□□□□ -1.87
CTK1YKL139W WSC4P38739 605 aa3.34□□□□□ -1.87
CTK1YKL139W CHL4P38907 458 aa3.34□□□□□ -1.87
CTK1YKL139W SOP4P39543 234 aaPredicted RBP3.34□□□□□ -1.87
CTK1YKL139W MEP2P41948 499 aa3.34□□□□□ -1.87
CTK1YKL139W BNA6P43619 295 aa3.34□□□□□ -1.87
CTK1YKL139W SCS7Q03529 384 aa3.34□□□□□ -1.87
CTK1YKL139W YMR209CQ03648 457 aa3.34□□□□□ -1.87
CTK1YKL139W ENT5Q03769 411 aaKnown RBP3.34□□□□□ -1.87
CTK1YKL139W YLR177WQ06251 628 aa3.34□□□□□ -1.87
CTK1YKL139W ILV1P00927 576 aaKnown RBP3.34□□□□□ -1.88
CTK1YKL139W PHO2P07269 559 aa3.34□□□□□ -1.88
CTK1YKL139W INO2P26798 304 aa3.34□□□□□ -1.88
CTK1YKL139W HSM3P38348 480 aa3.34□□□□□ -1.88
CTK1YKL139W PET8P38921 284 aa3.34□□□□□ -1.88
CTK1YKL139W TIM17P39515 158 aa3.34□□□□□ -1.88
CTK1YKL139W COA1P40452 197 aa3.34□□□□□ -1.88
CTK1YKL139W YPI1P43587 155 aa3.34□□□□□ -1.88
CTK1YKL139W YAR1P46683 200 aa3.34□□□□□ -1.88
CTK1YKL139W YJR054WP47114 497 aa3.34□□□□□ -1.88
CTK1YKL139W UBC13P52490 153 aa3.34□□□□□ -1.88
CTK1YKL139W TPC1P53257 314 aa3.34□□□□□ -1.88
CTK1YKL139W FAR10Q06001 478 aa3.34□□□□□ -1.88
CTK1YKL139W BOP2Q06150 570 aa3.34□□□□□ -1.88
CTK1YKL139W BSC6Q08280 497 aa3.34□□□□□ -1.88
CTK1YKL139W YOR376WQ08900 122 aa3.34□□□□□ -1.88
CTK1YKL139W RBD2Q12270 262 aa3.34□□□□□ -1.88
CTK1YKL139W MHP1P43638 1398 aa3.33□□□□□ -1.88
CTK1YKL139W MET16P18408 261 aaPredicted RBP3.33□□□□□ -1.88
CTK1YKL139W CDC42P19073 191 aa3.33□□□□□ -1.88
CTK1YKL139W VPS1P21576 704 aaKnown RBP3.33□□□□□ -1.88
CTK1YKL139W CMK2P22517 447 aa3.33□□□□□ -1.88
CTK1YKL139W CWP1P28319 239 aa3.33□□□□□ -1.88
CTK1YKL139W DEP1P31385 405 aa3.33□□□□□ -1.88
CTK1YKL139W YKL071WP36086 256 aa3.33□□□□□ -1.88
CTK1YKL139W YIA6P40556 373 aa3.33□□□□□ -1.88
CTK1YKL139W TIS11P47977 285 aa3.33□□□□□ -1.88
CTK1YKL139W LIP2Q06005 328 aa3.33□□□□□ -1.88
CTK1YKL139W TAZ1Q06510 381 aa3.33□□□□□ -1.88
CTK1YKL139W DTD1Q07648 150 aaKnown RBP3.33□□□□□ -1.88
CTK1YKL139W TLG2Q08144 397 aa3.33□□□□□ -1.88
CTK1YKL139W RRG7Q08774 242 aaPredicted RBP3.33□□□□□ -1.88
CTK1YKL139W RUD3Q12234 484 aaKnown RBP3.33□□□□□ -1.88
CTK1YKL139W RRP42Q12277 265 aaPredicted RBP3.33□□□□□ -1.88
CTK1YKL139W STE7P06784 515 aa3.32□□□□□ -1.88
CTK1YKL139W CDC50P25656 391 aa3.32□□□□□ -1.88
CTK1YKL139W YBR241CP38142 488 aa3.32□□□□□ -1.88
CTK1YKL139W RCK1P38622 512 aa3.32□□□□□ -1.88
CTK1YKL139W UTP18P40362 594 aaPredicted RBP3.32□□□□□ -1.88
CTK1YKL139W YGR015CP53208 328 aa3.32□□□□□ -1.88
CTK1YKL139W VHT1P53241 593 aa3.32□□□□□ -1.88
CTK1YKL139W CPD1P53314 239 aa3.32□□□□□ -1.88
CTK1YKL139W PET117Q02771 107 aa3.32□□□□□ -1.88
CTK1YKL139W VBA1Q04301 562 aa3.32□□□□□ -1.88
CTK1YKL139W YTH1Q06102 208 aaPredicted RBP3.32□□□□□ -1.88
CTK1YKL139W RSA1Q08932 381 aa3.32□□□□□ -1.88
CTK1YKL139W YPR064WQ12492 139 aa3.32□□□□□ -1.88
CTK1YKL139W RAD3P06839 778 aa3.31□□□□□ -1.88
CTK1YKL139W PRB1P09232 635 aa3.31□□□□□ -1.88
CTK1YKL139W ARO4P32449 370 aaKnown RBP3.31□□□□□ -1.88
CTK1YKL139W CBF5P33322 483 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
CTK1YKL139W SOL2P37262 315 aa3.31□□□□□ -1.88
CTK1YKL139W TIM21P53220 239 aa3.31□□□□□ -1.88
CTK1YKL139W NRM1P53718 249 aa3.31□□□□□ -1.88
CTK1YKL139W SRL4Q03085 281 aa3.31□□□□□ -1.88
CTK1YKL139W RPN8Q08723 338 aaKnown RBP3.31□□□□□ -1.88
CTK1YKL139W SGT2Q12118 346 aaKnown RBP3.31□□□□□ -1.88
CTK1YKL139W HRT3Q12347 344 aa3.31□□□□□ -1.88
CTK1YKL139W RPL21BQ12672 160 aaKnown RBP3.31□□□□□ -1.88
CTK1YKL139W TFS1P14306 219 aa3.3□□□□□ -1.88
CTK1YKL139W ZRC1P20107 442 aa3.3□□□□□ -1.88
CTK1YKL139W MRPL20P22354 195 aaPredicted RBP3.3□□□□□ -1.88
CTK1YKL139W RRT12P25381 491 aa3.3□□□□□ -1.88
CTK1YKL139W PRS1P32895 427 aaKnown RBP3.3□□□□□ -1.88
CTK1YKL139W SHE1P38200 338 aa3.3□□□□□ -1.88
CTK1YKL139W OM14P38325 134 aa3.3□□□□□ -1.88
CTK1YKL139W BIG1P38813 335 aa3.3□□□□□ -1.88
CTK1YKL139W SNM1P40993 198 aa3.3□□□□□ -1.88
CTK1YKL139W GAB1P41733 394 aa3.3□□□□□ -1.88
CTK1YKL139W STB1P42845 420 aa3.3□□□□□ -1.88
CTK1YKL139W OST6Q03723 332 aa3.3□□□□□ -1.88
CTK1YKL139W YLR446WQ06204 433 aa3.3□□□□□ -1.88
CTK1YKL139W CFT1Q06632 1357 aaKnown RBP3.3□□□□□ -1.88
CTK1YKL139W MIM1Q08176 113 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms