RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C YKL162CP36052 402 aa2.77□□□□□ -1.97
VPS25YJR102C YIR035CP40579 254 aa2.77□□□□□ -1.97
VPS25YJR102C PFS2P42841 465 aaKnown RBP2.77□□□□□ -1.97
VPS25YJR102C PMT4P46971 762 aa2.77□□□□□ -1.97
VPS25YJR102C HST4P53688 370 aa2.77□□□□□ -1.97
VPS25YJR102C INP2Q03824 705 aa2.77□□□□□ -1.97
VPS25YJR102C VPS20Q04272 221 aa2.77□□□□□ -1.97
VPS25YJR102C PRM4Q12498 284 aa2.77□□□□□ -1.97
VPS25YJR102C CBP2P03874 630 aaPredicted RBP2.76□□□□□ -1.97
VPS25YJR102C COX10P21592 462 aa2.76□□□□□ -1.97
VPS25YJR102C PET18P25362 215 aa2.76□□□□□ -1.97
VPS25YJR102C INO2P26798 304 aa2.76□□□□□ -1.97
VPS25YJR102C RCK1P38622 512 aa2.76□□□□□ -1.97
VPS25YJR102C TRR2P38816 342 aa2.76□□□□□ -1.97
VPS25YJR102C FET3P38993 636 aa2.76□□□□□ -1.97
VPS25YJR102C DSE1P40077 573 aa2.76□□□□□ -1.97
VPS25YJR102C YIL054WP40524 105 aa2.76□□□□□ -1.97
VPS25YJR102C SDS23P53172 527 aa2.76□□□□□ -1.97
VPS25YJR102C YMR111CQ04461 462 aaPredicted RBP2.76□□□□□ -1.97
VPS25YJR102C PBP4Q07362 185 aaKnown RBP2.76□□□□□ -1.97
VPS25YJR102C YMR262WP38430 313 aa2.75□□□□□ -1.97
VPS25YJR102C PET8P38921 284 aa2.75□□□□□ -1.97
VPS25YJR102C YDR089WP38966 869 aa2.75□□□□□ -1.97
VPS25YJR102C INA22P40576 216 aa2.75□□□□□ -1.97
VPS25YJR102C YGR266WP53326 701 aa2.75□□□□□ -1.97
VPS25YJR102C PRO2P54885 456 aaKnown RBP2.75□□□□□ -1.97
VPS25YJR102C APC4Q04601 652 aa2.75□□□□□ -1.97
VPS25YJR102C YLR012CQ07927 99 aa2.75□□□□□ -1.97
VPS25YJR102C MIM1Q08176 113 aa2.75□□□□□ -1.97
VPS25YJR102C MDY2Q12285 212 aa2.75□□□□□ -1.97
VPS25YJR102C CAR2P07991 424 aaKnown RBP2.74□□□□□ -1.97
VPS25YJR102C YKL187CP34231 750 aa2.74□□□□□ -1.97
VPS25YJR102C FRM2P37261 193 aa2.74□□□□□ -1.97
VPS25YJR102C YHR035WP38769 630 aa2.74□□□□□ -1.97
VPS25YJR102C RRG9P40156 214 aa2.74□□□□□ -1.97
VPS25YJR102C ASG7P46993 209 aa2.74□□□□□ -1.97
VPS25YJR102C YGL118CP53132 145 aa2.74□□□□□ -1.97
VPS25YJR102C CAX4P53223 239 aa2.74□□□□□ -1.97
VPS25YJR102C SNX41Q04053 625 aa2.74□□□□□ -1.97
VPS25YJR102C YPR195CQ06594 109 aa2.74□□□□□ -1.97
VPS25YJR102C YPL245WQ12179 454 aaKnown RBP2.74□□□□□ -1.97
VPS25YJR102C UTP23Q12339 254 aaKnown RBP2.74□□□□□ -1.97
VPS25YJR102C PAA1Q12447 191 aaKnown RBP2.74□□□□□ -1.97
VPS25YJR102C RAD7P06779 565 aa2.73□□□□□ -1.97
VPS25YJR102C GCD2P12754 651 aaPredicted RBP2.73□□□□□ -1.97
VPS25YJR102C CPT1P17898 393 aa2.73□□□□□ -1.97
VPS25YJR102C AST1P35183 429 aa2.73□□□□□ -1.97
VPS25YJR102C PRY2P36110 329 aa2.73□□□□□ -1.97
VPS25YJR102C PES4P39684 611 aa2.73□□□□□ -1.97
VPS25YJR102C SLM1P40485 686 aa2.73□□□□□ -1.97
VPS25YJR102C RIB4P50861 169 aaPredicted RBP2.73□□□□□ -1.97
VPS25YJR102C OKP1P53298 406 aa2.73□□□□□ -1.97
VPS25YJR102C DBP6P53734 629 aaKnown RBP2.73□□□□□ -1.97
VPS25YJR102C UBX2Q04228 584 aa2.73□□□□□ -1.97
VPS25YJR102C GMC1Q04399 608 aa2.73□□□□□ -1.97
VPS25YJR102C ECM19Q06011 112 aa2.73□□□□□ -1.97
VPS25YJR102C TFC7Q12415 435 aa2.73□□□□□ -1.97
VPS25YJR102C DFM1Q12743 341 aaKnown RBP2.73□□□□□ -1.97
VPS25YJR102C BI3Q9ZZW7 517 aa2.73□□□□□ -1.97
VPS25YJR102C SOP4P39543 234 aaPredicted RBP2.72□□□□□ -1.97
VPS25YJR102C YIL059CP40520 121 aa2.72□□□□□ -1.97
VPS25YJR102C MIC19P43594 170 aa2.72□□□□□ -1.97
VPS25YJR102C VOA1P53262 265 aa2.72□□□□□ -1.97
VPS25YJR102C YNR066CP53752 436 aa2.72□□□□□ -1.97
VPS25YJR102C VIK1Q12045 647 aa2.72□□□□□ -1.97
VPS25YJR102C RPL16BP26785 198 aaKnown RBP2.71□□□□□ -1.98
VPS25YJR102C RPB9P27999 122 aa2.71□□□□□ -1.98
VPS25YJR102C MNN9P39107 395 aaKnown RBP2.71□□□□□ -1.98
VPS25YJR102C YFL040WP43562 540 aa2.71□□□□□ -1.98
VPS25YJR102C ZRG17P53735 605 aa2.71□□□□□ -1.98
VPS25YJR102C SMD1Q02260 146 aaPredicted RBP2.71□□□□□ -1.98
VPS25YJR102C CUR1Q06469 252 aa2.71□□□□□ -1.98
VPS25YJR102C YPS3Q12303 508 aa2.71□□□□□ -1.98
VPS25YJR102C LAG2Q92325 660 aa2.71□□□□□ -1.98
VPS25YJR102C IZH4Q99393 312 aa2.71□□□□□ -1.98
VPS25YJR102C CUP2P15315 225 aa2.7□□□□□ -1.98
VPS25YJR102C SAR1P20606 190 aaKnown RBP2.7□□□□□ -1.98
VPS25YJR102C TRM10Q12400 293 aa2.7□□□□□ -1.98
VPS25YJR102C TDH3P00359 332 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98not detected
VPS25YJR102C RPL5P26321 297 aaKnown RBP2.69□□□□□ -1.98
VPS25YJR102C SWD2P36104 329 aaPredicted RBP2.69□□□□□ -1.98
VPS25YJR102C YPC1P38298 316 aa2.69□□□□□ -1.98
VPS25YJR102C SWC4P53201 476 aa2.69□□□□□ -1.98
VPS25YJR102C SEC13Q04491 297 aaKnown RBP2.69□□□□□ -1.98
VPS25YJR102C VAC14Q06708 880 aa2.69□□□□□ -1.98
VPS25YJR102C YOR292CQ08743 309 aa2.69□□□□□ -1.98
VPS25YJR102C APC9Q12107 265 aa2.69□□□□□ -1.98
VPS25YJR102C RRP42Q12277 265 aaPredicted RBP2.69□□□□□ -1.98
VPS25YJR102C PFK27Q12471 397 aaPredicted RBP2.69□□□□□ -1.98
VPS25YJR102C DCP1Q12517 231 aaPredicted RBP2.69□□□□□ -1.98
VPS25YJR102C MSS116P15424 664 aaKnown RBP2.68□□□□□ -1.98
VPS25YJR102C ASP1P38986 381 aaPredicted RBP2.68□□□□□ -1.98
VPS25YJR102C LOH1P47055 219 aa2.68□□□□□ -1.98
VPS25YJR102C COX16P47081 118 aa2.68□□□□□ -1.98
VPS25YJR102C RRG8Q06109 277 aa2.68□□□□□ -1.98
VPS25YJR102C YPL278CQ08990 100 aa2.68□□□□□ -1.98
VPS25YJR102C AGA2P32781 87 aa2.67□□□□□ -1.98
VPS25YJR102C CDC13P32797 924 aaKnown RBP2.67□□□□□ -1.98
VPS25YJR102C MRPL6P32904 214 aa2.67□□□□□ -1.98
VPS25YJR102C MCH2P36032 473 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 112.6 ms