RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W ATX2Q12067 313 aa3.34□□□□□ -1.88
UBP12YJL197W RRP42Q12277 265 aaPredicted RBP3.34□□□□□ -1.88
UBP12YJL197W PCL9Q12477 304 aa3.34□□□□□ -1.88
UBP12YJL197W RAD9P14737 1309 aa3.33□□□□□ -1.88
UBP12YJL197W NAM2P11325 894 aa3.33□□□□□ -1.88
UBP12YJL197W COX14P39103 70 aa3.33□□□□□ -1.88
UBP12YJL197W MIC26P50087 233 aa3.33□□□□□ -1.88
UBP12YJL197W RPM2Q02773 1202 aa3.33□□□□□ -1.88
UBP12YJL197W RSC9Q03124 581 aa3.33□□□□□ -1.88
UBP12YJL197W RIM13Q03792 727 aa3.33□□□□□ -1.88
UBP12YJL197W YDL144CQ07589 356 aa3.33□□□□□ -1.88
UBP12YJL197W CSR2Q12734 1121 aa3.33□□□□□ -1.88
UBP12YJL197W TFS1P14306 219 aa3.33□□□□□ -1.88
UBP12YJL197W CTA1P15202 515 aa3.33□□□□□ -1.88
UBP12YJL197W CBF1P17106 351 aa3.33□□□□□ -1.88
UBP12YJL197W YKL187CP34231 750 aa3.33□□□□□ -1.88
UBP12YJL197W YER184CP39961 794 aa3.33□□□□□ -1.88
UBP12YJL197W ALG8P40351 577 aa3.33□□□□□ -1.88
UBP12YJL197W IBD2P53892 351 aa3.33□□□□□ -1.88
UBP12YJL197W YPR064WQ12492 139 aa3.33□□□□□ -1.88
UBP12YJL197W HTB1P02293 131 aaKnown RBP3.33□□□□□ -1.88
UBP12YJL197W HTB2P02294 131 aa3.33□□□□□ -1.88
UBP12YJL197W REP1P03871 373 aa3.33□□□□□ -1.88
UBP12YJL197W RPL35AP0CX84 120 aaKnown RBP3.33□□□□□ -1.88
UBP12YJL197W RPL35BP0CX85 120 aaKnown RBP3.33□□□□□ -1.88
UBP12YJL197W IDH1P28834 360 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
UBP12YJL197W SSO1P32867 290 aa3.33□□□□□ -1.88
UBP12YJL197W TAF14P35189 244 aa3.33□□□□□ -1.88
UBP12YJL197W YNL194CP40169 301 aa3.33□□□□□ -1.88
UBP12YJL197W YNL320WP42840 284 aa3.33□□□□□ -1.88
UBP12YJL197W YPT32P51996 222 aaKnown RBP3.33□□□□□ -1.88
UBP12YJL197W CTR3Q06686 241 aa3.33□□□□□ -1.88
UBP12YJL197W PRM4Q12498 284 aa3.33□□□□□ -1.88
UBP12YJL197W QCR7P00128 127 aa3.32□□□□□ -1.88
UBP12YJL197W SAM2P19358 384 aaKnown RBP3.32□□□□□ -1.88
UBP12YJL197W MIX23P38162 196 aa3.32□□□□□ -1.88
UBP12YJL197W AVT5P38176 459 aa3.32□□□□□ -1.88
UBP12YJL197W GAT1P43574 510 aa3.32□□□□□ -1.88
UBP12YJL197W IKS1P47042 667 aa3.32□□□□□ -1.88
UBP12YJL197W YMR254CQ04838 102 aa3.32□□□□□ -1.88
UBP12YJL197W CMK2P22517 447 aa3.32□□□□□ -1.88
UBP12YJL197W POF1P25576 258 aa3.32□□□□□ -1.88
UBP12YJL197W RPL16AP26784 199 aaKnown RBP3.32□□□□□ -1.88
UBP12YJL197W DEP1P31385 405 aa3.32□□□□□ -1.88
UBP12YJL197W PDC2P32896 925 aa3.32□□□□□ -1.88
UBP12YJL197W PRX1P34227 261 aaKnown RBP3.32□□□□□ -1.88
UBP12YJL197W CUE1P38428 203 aa3.32□□□□□ -1.88
UBP12YJL197W YIR016WP40572 265 aa3.32□□□□□ -1.88
UBP12YJL197W DIM1P41819 318 aaKnown RBP3.32□□□□□ -1.88
UBP12YJL197W MRM2P53123 320 aa3.32□□□□□ -1.88
UBP12YJL197W YDL114WQ07530 308 aa3.32□□□□□ -1.88
UBP12YJL197W MFG1Q07684 458 aa3.32□□□□□ -1.88
UBP12YJL197W SNX3Q08826 162 aaKnown RBP3.32□□□□□ -1.88
UBP12YJL197W CRC1Q12289 327 aa3.32□□□□□ -1.88
UBP12YJL197W RPN6Q12377 434 aa3.32□□□□□ -1.88
UBP12YJL197W RIB5P38145 238 aa3.32□□□□□ -1.88
UBP12YJL197W SOP4P39543 234 aaPredicted RBP3.32□□□□□ -1.88
UBP12YJL197W YJR012CP47087 207 aa3.32□□□□□ -1.88
UBP12YJL197W YJR079WP47126 109 aa3.32□□□□□ -1.88
UBP12YJL197W SLI1P53304 468 aa3.32□□□□□ -1.88
UBP12YJL197W ERG13P54839 491 aaKnown RBP3.32□□□□□ -1.88
UBP12YJL197W FAR8Q05040 523 aa3.32□□□□□ -1.88
UBP12YJL197W YCR024C-BQ3E7Z8 88 aa3.32□□□□□ -1.88
UBP12YJL197W PIS1P06197 220 aaKnown RBP3.31□□□□□ -1.88
UBP12YJL197W ATR1P13090 542 aa3.31□□□□□ -1.88
UBP12YJL197W HOM6P31116 359 aaKnown RBP3.31□□□□□ -1.88
UBP12YJL197W ACP1P32463 125 aa3.31□□□□□ -1.88
UBP12YJL197W ERG10P41338 398 aaKnown RBP3.31□□□□□ -1.88
UBP12YJL197W NOP19P53317 196 aaPredicted RBP3.31□□□□□ -1.88
UBP12YJL197W MTQ1P53944 314 aa3.31□□□□□ -1.88
UBP12YJL197W SFH1Q06168 426 aa3.31□□□□□ -1.88
UBP12YJL197W PER33Q12144 273 aa3.31□□□□□ -1.88
UBP12YJL197W TPI1P00942 248 aaKnown RBP3.31□□□□□ -1.88
UBP12YJL197W SNF6P18888 332 aa3.31□□□□□ -1.88
UBP12YJL197W AST1P35183 429 aa3.31□□□□□ -1.88
UBP12YJL197W SCO2P38072 301 aa3.31□□□□□ -1.88
UBP12YJL197W UBP5P39944 805 aa3.31□□□□□ -1.88
UBP12YJL197W JHD2P47156 728 aaPredicted RBP3.31□□□□□ -1.88
UBP12YJL197W USE1P53146 245 aa3.31□□□□□ -1.88
UBP12YJL197W YCT1Q12235 531 aa3.31□□□□□ -1.88
UBP12YJL197W HTZ1Q12692 134 aaKnown RBP3.31□□□□□ -1.88
UBP12YJL197W YCR102CP25608 368 aa3.31□□□□□ -1.88
UBP12YJL197W TPS2P31688 896 aaKnown RBP3.31□□□□□ -1.88
UBP12YJL197W FES1P38260 290 aa3.31□□□□□ -1.88
UBP12YJL197W BMT2P38278 337 aa3.31□□□□□ -1.88
UBP12YJL197W YIL024CP40543 189 aa3.31□□□□□ -1.88
UBP12YJL197W AZF1P41696 914 aa3.31□□□□□ -1.88
UBP12YJL197W MGA1P53050 456 aa3.31□□□□□ -1.88
UBP12YJL197W NSA1P53136 463 aaPredicted RBP3.31□□□□□ -1.88
UBP12YJL197W CDC14Q00684 551 aa3.31□□□□□ -1.88
UBP12YJL197W SEC13Q04491 297 aaKnown RBP3.31□□□□□ -1.88
UBP12YJL197W PLB3Q08108 686 aa3.31□□□□□ -1.88
UBP12YJL197W TAF10Q12030 206 aa3.31□□□□□ -1.88
UBP12YJL197W DCN1Q12395 269 aa3.31□□□□□ -1.88
UBP12YJL197W YCL012CQ8J0M4 134 aa3.31□□□□□ -1.88
UBP12YJL197W YAK1P14680 807 aa3.3□□□□□ -1.88
UBP12YJL197W SPO23P33757 523 aa3.3□□□□□ -1.88
UBP12YJL197W SDS24P38314 527 aa3.3□□□□□ -1.88
UBP12YJL197W TRM5P38793 499 aa3.3□□□□□ -1.88
UBP12YJL197W IKI1P38874 309 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 110.7 ms