RNA–Protein interactions for RNA: YIL016W

SNL1, Transcript of Ribosome-associated protein, yeast

Gene SNL1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNL1	YIL016W	SWC4	P53201	476 aa		3.76	□□□□□ -1.81
SNL1	YIL016W	CPD1	P53314	239 aa		3.76	□□□□□ -1.81
SNL1	YIL016W	PET117	Q02771	107 aa		3.76	□□□□□ -1.81
SNL1	YIL016W	CWC21	Q03375	135 aa	Known RBP	3.76	□□□□□ -1.81
SNL1	YIL016W	CFT1	Q06632	1357 aa	Known RBP	3.76	□□□□□ -1.81
SNL1	YIL016W	HPR1	P17629	752 aa	Known RBP	3.75	□□□□□ -1.81
SNL1	YIL016W	CPR3	P25719	182 aa		3.75	□□□□□ -1.81
SNL1	YIL016W	PRR1	P28708	518 aa		3.75	□□□□□ -1.81
SNL1	YIL016W	LDS1	P31379	325 aa		3.75	□□□□□ -1.81
SNL1	YIL016W	ARO4	P32449	370 aa	Known RBP	3.75	□□□□□ -1.81
SNL1	YIL016W	RPC37	P36121	282 aa		3.75	□□□□□ -1.81
SNL1	YIL016W	PFS1	P38872	237 aa		3.75	□□□□□ -1.81
SNL1	YIL016W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
SNL1	YIL016W	COA1	P40452	197 aa		3.75	□□□□□ -1.81
SNL1	YIL016W	TIM21	P53220	239 aa		3.75	□□□□□ -1.81
SNL1	YIL016W	BOR1	P53838	576 aa		3.75	□□□□□ -1.81
SNL1	YIL016W	PRP38	Q00723	242 aa	Predicted RBP	3.75	□□□□□ -1.81
SNL1	YIL016W	BOP2	Q06150	570 aa		3.75	□□□□□ -1.81
SNL1	YIL016W	MRX9	Q07349	420 aa	Known RBP	3.75	□□□□□ -1.81
SNL1	YIL016W	YOR029W	Q12243	111 aa		3.75	□□□□□ -1.81
SNL1	YIL016W	RRP42	Q12277	265 aa	Predicted RBP	3.75	□□□□□ -1.81
SNL1	YIL016W	MHP1	P43638	1398 aa		3.75	□□□□□ -1.81
SNL1	YIL016W	RAD3	P06839	778 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	MRP1	P10662	321 aa	Known RBP	3.74	□□□□□ -1.81
SNL1	YIL016W	MET16	P18408	261 aa	Predicted RBP	3.74	□□□□□ -1.81
SNL1	YIL016W	DAL82	P21705	255 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	ARO2	P28777	376 aa	Known RBP	3.74	□□□□□ -1.81
SNL1	YIL016W	MSN4	P33749	630 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	MCH2	P36032	473 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	BIG1	P38813	335 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	BAT1	P38891	393 aa	Known RBP	3.74	□□□□□ -1.81
SNL1	YIL016W	PET8	P38921	284 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	SOP4	P39543	234 aa	Predicted RBP	3.74	□□□□□ -1.81
SNL1	YIL016W	YIA6	P40556	373 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	GDS1	P41913	522 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	YAR1	P46683	200 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	TPC1	P53257	314 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	VAC7	P53950	1165 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	YET2	Q04210	160 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	YLR177W	Q06251	628 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	PLP2	Q12017	286 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	SFM1	Q12314	213 aa		3.74	□□□□□ -1.81
SNL1	YIL016W	CBS2	P14905	389 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	NUP2	P32499	720 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	PRS1	P32895	427 aa	Known RBP	3.73	□□□□□ -1.81
SNL1	YIL016W	PDC2	P32896	925 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	YKL071W	P36086	256 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	YBR241C	P38142	488 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	MIG3	P39943	394 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	AIM10	P39965	576 aa	Known RBP	3.73	□□□□□ -1.81
SNL1	YIL016W	YER186C	P40101	306 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	UBC13	P52490	153 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	ALG11	P53954	548 aa	Known RBP	3.73	□□□□□ -1.81
SNL1	YIL016W	OST6	Q03723	332 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	TAZ1	Q06510	381 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	FDH1	Q08911	376 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	TFC7	Q12415	435 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	ATG31	Q12421	196 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	PRM4	Q12498	284 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	YBL111C	Q3E7Y5	667 aa		3.73	□□□□□ -1.81
SNL1	YIL016W	HIS1	P00498	297 aa	Known RBP	3.72	□□□□□ -1.81
SNL1	YIL016W	TFS1	P14306	219 aa		3.72	□□□□□ -1.81
SNL1	YIL016W	AAT2	P23542	418 aa	Known RBP	3.72	□□□□□ -1.81
SNL1	YIL016W	YCR016W	P25617	290 aa	Known RBP	3.72	□□□□□ -1.81
SNL1	YIL016W	NTG1	P31378	399 aa		3.72	□□□□□ -1.81
SNL1	YIL016W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.72	□□□□□ -1.81	not detected
SNL1	YIL016W	TIM17	P39515	158 aa		3.72	□□□□□ -1.81
SNL1	YIL016W	FMC1	P40491	155 aa		3.72	□□□□□ -1.81
SNL1	YIL016W	YJR054W	P47114	497 aa		3.72	□□□□□ -1.81
SNL1	YIL016W	TIS11	P47977	285 aa		3.72	□□□□□ -1.81
SNL1	YIL016W	CDC14	Q00684	551 aa		3.72	□□□□□ -1.81
SNL1	YIL016W	SKI8	Q02793	397 aa	Predicted RBP	3.72	□□□□□ -1.81
SNL1	YIL016W	SCS7	Q03529	384 aa		3.72	□□□□□ -1.81
SNL1	YIL016W	VBA1	Q04301	562 aa		3.72	□□□□□ -1.81
SNL1	YIL016W	LIP2	Q06005	328 aa		3.72	□□□□□ -1.81
SNL1	YIL016W	YPR064W	Q12492	139 aa		3.72	□□□□□ -1.81
SNL1	YIL016W	MRPL20	P22354	195 aa	Predicted RBP	3.71	□□□□□ -1.82
SNL1	YIL016W	CMK2	P22517	447 aa		3.71	□□□□□ -1.82
SNL1	YIL016W	DEP1	P31385	405 aa		3.71	□□□□□ -1.82
SNL1	YIL016W	DOA4	P32571	926 aa		3.71	□□□□□ -1.82
SNL1	YIL016W	SUA5	P32579	426 aa		3.71	□□□□□ -1.82
SNL1	YIL016W	SPT4	P32914	102 aa	Predicted RBP	3.71	□□□□□ -1.82
SNL1	YIL016W	TCD1	P38756	429 aa		3.71	□□□□□ -1.82
SNL1	YIL016W	CHL4	P38907	458 aa		3.71	□□□□□ -1.82
SNL1	YIL016W	YER085C	P40058	173 aa		3.71	□□□□□ -1.82
SNL1	YIL016W	STB1	P42845	420 aa		3.71	□□□□□ -1.82
SNL1	YIL016W	VHT1	P53241	593 aa		3.71	□□□□□ -1.82
SNL1	YIL016W	NRM1	P53718	249 aa		3.71	□□□□□ -1.82
SNL1	YIL016W	MNT4	P53745	580 aa		3.71	□□□□□ -1.82
SNL1	YIL016W	SRL4	Q03085	281 aa		3.71	□□□□□ -1.82
SNL1	YIL016W	ENT5	Q03769	411 aa	Known RBP	3.71	□□□□□ -1.82
SNL1	YIL016W	YLR446W	Q06204	433 aa		3.71	□□□□□ -1.82
SNL1	YIL016W	DTD1	Q07648	150 aa	Known RBP	3.71	□□□□□ -1.82
SNL1	YIL016W	RPL21B	Q12672	160 aa	Known RBP	3.71	□□□□□ -1.82
SNL1	YIL016W	RRT12	P25381	491 aa		3.7	□□□□□ -1.82
SNL1	YIL016W	CDC50	P25656	391 aa		3.7	□□□□□ -1.82
SNL1	YIL016W	MRPL6	P32904	214 aa		3.7	□□□□□ -1.82
SNL1	YIL016W	SWD3	P38123	315 aa		3.7	□□□□□ -1.82
SNL1	YIL016W	RCK1	P38622	512 aa		3.7	□□□□□ -1.82
SNL1	YIL016W	DED81	P38707	554 aa	Known RBP	3.7	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms