RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC97	YHR172W	YPR127W	Q06494	345 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	ENB1	Q08299	606 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	RKI1	Q12189	258 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	TY1A-BL	Q12266	440 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	TAF2	P23255	1407 aa		4.87	□□□□□ -1.63
SPC97	YHR172W	AI3	P03877	415 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	AAT2	P23542	418 aa	Known RBP	4.86	□□□□□ -1.63
SPC97	YHR172W	CDC10	P25342	322 aa	Known RBP	4.86	□□□□□ -1.63
SPC97	YHR172W	TOA2	P32774	122 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	YAT2	P40017	923 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	COG3	P40094	801 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	YFL040W	P43562	540 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	LST7	P53237	242 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	COS6	P53344	381 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	TY1A-MR1	Q04215	440 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	BCH1	Q05029	724 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	YDL086W	Q07505	273 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	YDR018C	Q12185	396 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	MDS3	P53094	1487 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	MES1	P00958	751 aa	Known RBP	4.86	□□□□□ -1.63
SPC97	YHR172W	TPK3	P05986	398 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	TRP4	P07285	380 aa	Predicted RBP	4.86	□□□□□ -1.63
SPC97	YHR172W	COX13	P32799	129 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	FLO10	P36170	1169 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	SMB1	P40018	196 aa	Known RBP	4.86	□□□□□ -1.63
SPC97	YHR172W	USE1	P53146	245 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	SCW11	P53189	542 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	YLR031W	Q07978	186 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	HNT3	Q08702	217 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	MLH3	Q12083	715 aa		4.86	□□□□□ -1.63
SPC97	YHR172W	HEM2	P05373	342 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	SAC1	P32368	623 aa	Known RBP	4.85	□□□□□ -1.63
SPC97	YHR172W	YCR087C-A	P37263	153 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	YJL016W	P47072	561 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	BRR6	P53062	197 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	ALG13	P53178	202 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	CAF40	P53829	373 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	PFA5	Q03289	374 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	RGT2	Q12300	763 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	TKL1	P23254	680 aa	Known RBP	4.85	□□□□□ -1.63
SPC97	YHR172W	SGE1	P33335	543 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	ARP1	P38696	384 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	GOS1	P38736	223 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	YHR035W	P38769	630 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	FAA2	P39518	744 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	YJR012C	P47087	207 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	NUP57	P48837	541 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	SHY1	P53266	389 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	YNL095C	P53932	642 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	COG5	P53951	403 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	YMR034C	Q05131	434 aa	Predicted RBP	4.85	□□□□□ -1.63
SPC97	YHR172W	CTR3	Q06686	241 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	YCT1	Q12235	531 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	WIP1	Q2V2P8	89 aa		4.85	□□□□□ -1.63
SPC97	YHR172W	POF1	P25576	258 aa		4.84	□□□□□ -1.63
SPC97	YHR172W	HOM6	P31116	359 aa	Known RBP	4.84	□□□□□ -1.63
SPC97	YHR172W	RBG1	P39729	369 aa		4.84	□□□□□ -1.63
SPC97	YHR172W	PAC2	P39937	518 aa		4.84	□□□□□ -1.63
SPC97	YHR172W	OXA1	P39952	402 aa		4.84	□□□□□ -1.63
SPC97	YHR172W	PMT6	P42934	759 aa		4.84	□□□□□ -1.63
SPC97	YHR172W	IRC18	P47056	224 aa		4.84	□□□□□ -1.63
SPC97	YHR172W	UBC11	P52492	156 aa		4.84	□□□□□ -1.63
SPC97	YHR172W	CDC14	Q00684	551 aa		4.84	□□□□□ -1.63
SPC97	YHR172W	TPS1	Q00764	495 aa	Known RBP	4.84	□□□□□ -1.63
SPC97	YHR172W	MFG1	Q07684	458 aa		4.84	□□□□□ -1.63
SPC97	YHR172W	SUT2	Q12286	268 aa		4.84	□□□□□ -1.63
SPC97	YHR172W	YKL033W-A	Q86ZR7	236 aa		4.84	□□□□□ -1.63
SPC97	YHR172W	IZH4	Q99393	312 aa		4.84	□□□□□ -1.63
SPC97	YHR172W	Q0144	Q9ZZW2	109 aa		4.84	□□□□□ -1.63
SPC97	YHR172W	RPL31A	P0C2H8	113 aa	Known RBP	4.84	□□□□□ -1.64
SPC97	YHR172W	MRP2	P10663	115 aa	Predicted RBP	4.84	□□□□□ -1.64
SPC97	YHR172W	HSP30	P25619	332 aa		4.84	□□□□□ -1.64
SPC97	YHR172W	MUD1	P32605	298 aa	Known RBP	4.84	□□□□□ -1.64
SPC97	YHR172W	NTF2	P33331	125 aa	Known RBP	4.84	□□□□□ -1.64
SPC97	YHR172W	MET30	P39014	640 aa		4.84	□□□□□ -1.64
SPC97	YHR172W	YIA6	P40556	373 aa		4.84	□□□□□ -1.64
SPC97	YHR172W	DYN2	Q02647	92 aa		4.84	□□□□□ -1.64
SPC97	YHR172W	HEM25	Q07534	307 aa		4.84	□□□□□ -1.64
SPC97	YHR172W	SGT1	Q08446	395 aa		4.84	□□□□□ -1.64
SPC97	YHR172W	RPL20A	P0CX23	172 aa	Known RBP	4.83	□□□□□ -1.64
SPC97	YHR172W	RPL20B	P0CX24	172 aa	Predicted RBP	4.83	□□□□□ -1.64
SPC97	YHR172W	IDP1	P21954	428 aa	Known RBP	4.83	□□□□□ -1.64
SPC97	YHR172W	CLB2	P24869	491 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	YKL097C	P34245	136 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	APL3	P38065	1025 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
SPC97	YHR172W	BUD32	P53323	261 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	NOC4	Q06512	552 aa	Predicted RBP	4.83	□□□□□ -1.64
SPC97	YHR172W	SKI7	Q08491	747 aa	Predicted RBP	4.83	□□□□□ -1.64
SPC97	YHR172W	YLR050C	Q12155	161 aa	Known RBP	4.83	□□□□□ -1.64
SPC97	YHR172W	ICT1	Q12385	394 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	TOP2	P06786	1428 aa	Known RBP	4.83	□□□□□ -1.64
SPC97	YHR172W	CDC8	P00572	216 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	STE4	P18851	423 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	MKK1	P32490	508 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	RAD5	P32849	1169 aa	Predicted RBP	4.83	□□□□□ -1.64
SPC97	YHR172W	YBR241C	P38142	488 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	GDS1	P41913	522 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	PHB2	P50085	310 aa		4.83	□□□□□ -1.64
SPC97	YHR172W	GPI1	P53306	609 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms