RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP6	YFR010W	COG5	P53951	403 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	TPS1	Q00764	495 aa	Known RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	RSM23	Q01163	450 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	ABF2	Q02486	183 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	DYN2	Q02647	92 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	YPL080C	Q02826	108 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	YML108W	Q03759	105 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	MSS11	Q03825	758 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	NAT4	Q04751	285 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	PBP4	Q07362	185 aa	Known RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	DTD1	Q07648	150 aa	Known RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	IZH3	Q07959	543 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	YNG1	Q08465	219 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	AKR2	Q12013	749 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	NCE102	Q12207	173 aa	RIP-Chip data	3.75	□□□□□ -1.81	not detected
UBP6	YFR010W	HMS1	Q12398	434 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	YLR361C-A	Q3E795	98 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	TAF2	P23255	1407 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	KIN28	P06242	306 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	RPL4A	P10664	362 aa	Known RBP	3.74	□□□□□ -1.81
UBP6	YFR010W	CPR4	P25334	318 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	SLM5	P25345	492 aa	Known RBP	3.74	□□□□□ -1.81
UBP6	YFR010W	YCR101C	P25607	182 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	LAC1	P28496	418 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	SHP1	P34223	423 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	CTP1	P38152	299 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	DBP8	P38719	431 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	DHH1	P39517	506 aa	Known RBP	3.74	□□□□□ -1.81
UBP6	YFR010W	PAC2	P39937	518 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	OXA1	P39952	402 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	SHO1	P40073	367 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	COG3	P40094	801 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	PRE6	P40303	254 aa	Known RBP	3.74	□□□□□ -1.81
UBP6	YFR010W	GDS1	P41913	522 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	ASG7	P46993	209 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	TAD2	P47058	250 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	YJR079W	P47126	109 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	TIS11	P47977	285 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	RPL4B	P49626	362 aa	Known RBP	3.74	□□□□□ -1.81
UBP6	YFR010W	NBP1	P52919	319 aa	Predicted RBP	3.74	□□□□□ -1.81
UBP6	YFR010W	COS6	P53344	381 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	YDR209C	Q03480	137 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	VBA1	Q04301	562 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	PLM2	Q04383	521 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	YDL242W	Q07746	117 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	YLR036C	Q07986	203 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	THP1	Q08231	455 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	IRC13	Q08630	104 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	HNT3	Q08702	217 aa		3.74	□□□□□ -1.81
UBP6	YFR010W	RPS10A	Q08745	105 aa	Predicted RBP	3.74	□□□□□ -1.81
UBP6	YFR010W	CDC8	P00572	216 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	MES1	P00958	751 aa	Known RBP	3.73	□□□□□ -1.81
UBP6	YFR010W	RPL28	P02406	149 aa	Known RBP	3.73	□□□□□ -1.81
UBP6	YFR010W	IMA3	P0CW40	589 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	IMA4	P0CW41	589 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	ACB1	P31787	87 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	CAT2	P32796	670 aa	Known RBP	3.73	□□□□□ -1.81
UBP6	YFR010W	VAM7	P32912	316 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	MTR2	P34232	184 aa	Known RBP	3.73	□□□□□ -1.81
UBP6	YFR010W	ANR2	P36090	516 aa	Predicted RBP	3.73	□□□□□ -1.81
UBP6	YFR010W	RPL10	P41805	221 aa	Known RBP	3.73	□□□□□ -1.81
UBP6	YFR010W	FMP32	P43557	207 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	PHB2	P50085	310 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	UBP8	P50102	471 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	MMS2	P53152	137 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	GTR2	P53290	341 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	MSO1	P53604	210 aa	Known RBP	3.73	□□□□□ -1.81
UBP6	YFR010W	NRK1	P53915	240 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	YML122C	Q03207	126 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	GLO2	Q05584	274 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	HRD3	Q05787	833 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	YDL057W	Q07379	328 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	YDL086W	Q07505	273 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	LDS2	Q08218	356 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	IMA2	Q08295	589 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	USB1	Q12208	290 aa	Known RBP	3.73	□□□□□ -1.81
UBP6	YFR010W	Q0010	Q9ZZX9	128 aa		3.73	□□□□□ -1.81
UBP6	YFR010W	HIS3	P06633	220 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	SAT4	P25333	603 aa	Known RBP	3.72	□□□□□ -1.81
UBP6	YFR010W	SEC1	P30619	724 aa	Known RBP	3.72	□□□□□ -1.81
UBP6	YFR010W	SGE1	P33335	543 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	RPS1A	P33442	255 aa	Known RBP	3.72	□□□□□ -1.81
UBP6	YFR010W	YKL187C	P34231	750 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	CSG2	P35206	410 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	YCR087C-A	P37263	153 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	CUE1	P38428	203 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	TDA11	P38854	504 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	BDH2	P39713	417 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	RPS10B	P46784	105 aa	Known RBP	3.72	□□□□□ -1.81
UBP6	YFR010W	YJR030C	P47101	745 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	YNL092W	P53934	400 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	CDC14	Q00684	551 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	YPL077C	Q02831	240 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	GIP3	Q03016	1276 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	HSP31	Q04432	237 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	ARC18	Q05933	178 aa	Known RBP	3.72	□□□□□ -1.81
UBP6	YFR010W	ASA1	Q06822	443 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	YLR031W	Q07978	186 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	IRC10	Q08118	586 aa		3.72	□□□□□ -1.81
UBP6	YFR010W	SGT1	Q08446	395 aa		3.72	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms