RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W YNL050CP53952 270 aa1.94□□□□□ -2.1
NIC96YFR002W YMR102CQ03177 834 aa1.94□□□□□ -2.1
NIC96YFR002W RAX1Q08760 435 aa1.94□□□□□ -2.1
NIC96YFR002W JID1Q12350 301 aa1.94□□□□□ -2.1
NIC96YFR002W DUR1,2P32528 1835 aaKnown RBP1.94□□□□□ -2.1
NIC96YFR002W QCR6P00127 147 aa1.93□□□□□ -2.1
NIC96YFR002W ARG80P07249 177 aa1.93□□□□□ -2.1
NIC96YFR002W PRB1P09232 635 aa1.93□□□□□ -2.1
NIC96YFR002W YLL053CP0CD98 152 aa1.93□□□□□ -2.1
NIC96YFR002W MAS2P11914 482 aa1.93□□□□□ -2.1
NIC96YFR002W RSR1P13856 272 aa1.93□□□□□ -2.1
NIC96YFR002W CDC42P19073 191 aa1.93□□□□□ -2.1
NIC96YFR002W SAR1P20606 190 aaKnown RBP1.93□□□□□ -2.1
NIC96YFR002W MXR2P25566 168 aa1.93□□□□□ -2.1
NIC96YFR002W VAM7P32912 316 aa1.93□□□□□ -2.1
NIC96YFR002W ECT1P33412 323 aa1.93□□□□□ -2.1
NIC96YFR002W MSN4P33749 630 aa1.93□□□□□ -2.1
NIC96YFR002W CHK1P38147 527 aa1.93□□□□□ -2.1
NIC96YFR002W PET100P38958 111 aa1.93□□□□□ -2.1
NIC96YFR002W RCY1P39531 840 aa1.93□□□□□ -2.1
NIC96YFR002W YMR134WP40207 237 aa1.93□□□□□ -2.1
NIC96YFR002W LIA1P47120 325 aaKnown RBP1.93□□□□□ -2.1
NIC96YFR002W ABM1P47146 123 aa1.93□□□□□ -2.1
NIC96YFR002W ATC1Q04005 294 aa1.93□□□□□ -2.1
NIC96YFR002W YLR173WQ06247 608 aa1.93□□□□□ -2.1
NIC96YFR002W DNL4Q08387 944 aaPredicted RBP1.93□□□□□ -2.1
NIC96YFR002W TPT1Q12272 230 aaKnown RBP1.93□□□□□ -2.1
NIC96YFR002W GLE1Q12315 538 aa1.93□□□□□ -2.1
NIC96YFR002W MSB2P32334 1306 aa1.93□□□□□ -2.1
NIC96YFR002W ARF1P11076 181 aaKnown RBP1.93□□□□□ -2.1
NIC96YFR002W UTR1P21373 530 aa1.93□□□□□ -2.1
NIC96YFR002W IMP3P32899 183 aaPredicted RBP1.93□□□□□ -2.1
NIC96YFR002W MRPS5P33759 307 aa1.93□□□□□ -2.1
NIC96YFR002W RPC25P35718 212 aa1.93□□□□□ -2.1
NIC96YFR002W YKT6P36015 200 aaKnown RBP1.93□□□□□ -2.1
NIC96YFR002W ALD5P40047 520 aaKnown RBP1.93□□□□□ -2.1
NIC96YFR002W LOH1P47055 219 aa1.93□□□□□ -2.1
NIC96YFR002W MNT4P53745 580 aa1.93□□□□□ -2.1
NIC96YFR002W YNL260CP53846 198 aa1.93□□□□□ -2.1
NIC96YFR002W RNY1Q02933 434 aaKnown RBP1.93□□□□□ -2.1
NIC96YFR002W RIF2Q06208 395 aa1.93□□□□□ -2.1
NIC96YFR002W YOL107WQ12239 342 aa1.93□□□□□ -2.1
NIC96YFR002W RAD1P06777 1100 aa1.92□□□□□ -2.1
NIC96YFR002W MSI1P13712 422 aa1.92□□□□□ -2.1
NIC96YFR002W FRS2P15625 503 aaKnown RBP1.92□□□□□ -2.1
NIC96YFR002W FAR1P21268 830 aa1.92□□□□□ -2.1
NIC96YFR002W GPI12P23797 304 aa1.92□□□□□ -2.1
NIC96YFR002W SLX1P38324 304 aa1.92□□□□□ -2.1
NIC96YFR002W TAE1P38340 232 aa1.92□□□□□ -2.1
NIC96YFR002W ATG7P38862 630 aa1.92□□□□□ -2.1
NIC96YFR002W BAT1P38891 393 aaKnown RBP1.92□□□□□ -2.1
NIC96YFR002W DSE1P40077 573 aa1.92□□□□□ -2.1
NIC96YFR002W YIL029CP40538 142 aa1.92□□□□□ -2.1
NIC96YFR002W COS1P53822 381 aa1.92□□□□□ -2.1
NIC96YFR002W RSM10Q03201 203 aa1.92□□□□□ -2.1
NIC96YFR002W NAT4Q04751 285 aa1.92□□□□□ -2.1
NIC96YFR002W ADF1Q2V2Q1 113 aa1.92□□□□□ -2.1
NIC96YFR002W YBL111CQ3E7Y5 667 aa1.92□□□□□ -2.1
NIC96YFR002W MEX67Q99257 599 aaKnown RBP1.92□□□□□ -2.1
NIC96YFR002W RPP0P05317 312 aaKnown RBP1.92□□□□□ -2.1
NIC96YFR002W TPK3P05986 398 aa1.92□□□□□ -2.1
NIC96YFR002W MSF1P08425 469 aa1.92□□□□□ -2.1
NIC96YFR002W POL30P15873 258 aaKnown RBP1.92□□□□□ -2.1
NIC96YFR002W ARO4P32449 370 aaKnown RBP1.92□□□□□ -2.1
NIC96YFR002W DPH5P32469 300 aaPredicted RBP1.92□□□□□ -2.1
NIC96YFR002W DOA4P32571 926 aa1.92□□□□□ -2.1
NIC96YFR002W DOA1P36037 715 aa1.92□□□□□ -2.1
NIC96YFR002W YBR056WP38081 501 aa1.92□□□□□ -2.1
NIC96YFR002W BTT1P40314 149 aaPredicted RBP1.92□□□□□ -2.1
NIC96YFR002W DFG10P40526 253 aa1.92□□□□□ -2.1
NIC96YFR002W GCN20P43535 752 aaKnown RBP1.92□□□□□ -2.1
NIC96YFR002W RAD17P48581 401 aa1.92□□□□□ -2.1
NIC96YFR002W BNS1P50084 137 aa1.92□□□□□ -2.1
NIC96YFR002W NAS6P50086 228 aa1.92□□□□□ -2.1
NIC96YFR002W COX20Q04935 205 aa1.92□□□□□ -2.1
NIC96YFR002W BUR2Q05949 395 aa1.92□□□□□ -2.1
NIC96YFR002W YOR338WQ99326 363 aa1.92□□□□□ -2.1
NIC96YFR002W SSC1P0CS90 654 aaKnown RBP1.91□□□□□ -2.1
NIC96YFR002W RPB4P20433 221 aaPredicted RBP1.91□□□□□ -2.1
NIC96YFR002W AAT2P23542 418 aaKnown RBP1.91□□□□□ -2.1
NIC96YFR002W COX13P32799 129 aa1.91□□□□□ -2.1
NIC96YFR002W MYO3P36006 1272 aa1.91□□□□□ -2.1
NIC96YFR002W YHR045WP38775 560 aa1.91□□□□□ -2.1
NIC96YFR002W UTP25P40498 721 aaKnown RBP1.91□□□□□ -2.1
NIC96YFR002W INA22P40576 216 aa1.91□□□□□ -2.1
NIC96YFR002W MRM2P53123 320 aa1.91□□□□□ -2.1
NIC96YFR002W YGR168CP53293 376 aa1.91□□□□□ -2.1
NIC96YFR002W SRL4Q03085 281 aa1.91□□□□□ -2.1
NIC96YFR002W CCE1Q03702 353 aa1.91□□□□□ -2.1
NIC96YFR002W INP2Q03824 705 aa1.91□□□□□ -2.1
NIC96YFR002W YPL278CQ08990 100 aa1.91□□□□□ -2.1
NIC96YFR002W PRP46Q12417 451 aaPredicted RBP1.91□□□□□ -2.1
NIC96YFR002W TDH3P00359 332 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
NIC96YFR002W ATP1P07251 545 aaKnown RBP1.91□□□□□ -2.1
NIC96YFR002W POX1P13711 748 aa1.91□□□□□ -2.1
NIC96YFR002W RPB5P20434 215 aa1.91□□□□□ -2.1
NIC96YFR002W EFB1P32471 206 aaKnown RBP1.91□□□□□ -2.1
NIC96YFR002W SKT5P34226 696 aa1.91□□□□□ -2.1
NIC96YFR002W GPX2P38143 162 aa1.91□□□□□ -2.1
NIC96YFR002W IST2P38250 946 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms