RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W ACB1P31787 87 aa2.28□□□□□ -2.04
LOC1YFR001W MEI5P32489 222 aa2.28□□□□□ -2.04
LOC1YFR001W BUD2P33314 1104 aa2.28□□□□□ -2.04
LOC1YFR001W SRB2P34162 210 aa2.28□□□□□ -2.04
LOC1YFR001W VTI1Q04338 217 aa2.28□□□□□ -2.04
LOC1YFR001W STE23Q06010 1027 aa2.28□□□□□ -2.04
LOC1YFR001W DTD1Q07648 150 aaKnown RBP2.28□□□□□ -2.04
LOC1YFR001W YLR012CQ07927 99 aa2.28□□□□□ -2.04
LOC1YFR001W APC2Q12440 853 aa2.28□□□□□ -2.04
LOC1YFR001W YIL059CP40520 121 aa2.27□□□□□ -2.05
LOC1YFR001W RPN14P53196 417 aa2.27□□□□□ -2.05
LOC1YFR001W TPM1P17536 199 aaKnown RBP2.26□□□□□ -2.05
LOC1YFR001W PET8P38921 284 aa2.26□□□□□ -2.05
LOC1YFR001W SLM1P40485 686 aa2.26□□□□□ -2.05
LOC1YFR001W YIL054WP40524 105 aa2.26□□□□□ -2.05
LOC1YFR001W ASG7P46993 209 aa2.26□□□□□ -2.05
LOC1YFR001W YGR168CP53293 376 aa2.26□□□□□ -2.05
LOC1YFR001W OPI1P21957 404 aa2.25□□□□□ -2.05
LOC1YFR001W CTM1P38818 585 aa2.25□□□□□ -2.05
LOC1YFR001W SPO73P40031 143 aa2.25□□□□□ -2.05
LOC1YFR001W YFL040WP43562 540 aa2.25□□□□□ -2.05
LOC1YFR001W YGL118CP53132 145 aa2.25□□□□□ -2.05
LOC1YFR001W CAX4P53223 239 aa2.25□□□□□ -2.05
LOC1YFR001W YNR066CP53752 436 aa2.25□□□□□ -2.05
LOC1YFR001W UBX2Q04228 584 aa2.25□□□□□ -2.05
LOC1YFR001W TRM10Q12400 293 aa2.25□□□□□ -2.05
LOC1YFR001W PRP46Q12417 451 aaPredicted RBP2.25□□□□□ -2.05
LOC1YFR001W VMA2P16140 517 aaKnown RBP2.24□□□□□ -2.05
LOC1YFR001W ERD1P16151 362 aa2.24□□□□□ -2.05
LOC1YFR001W MRPL20P22354 195 aaPredicted RBP2.24□□□□□ -2.05
LOC1YFR001W YPS1P32329 569 aa2.24□□□□□ -2.05
LOC1YFR001W UTP25P40498 721 aaKnown RBP2.24□□□□□ -2.05
LOC1YFR001W INA22P40576 216 aa2.24□□□□□ -2.05
LOC1YFR001W YPL245WQ12179 454 aaKnown RBP2.24□□□□□ -2.05
LOC1YFR001W RPS23AP0CX29 145 aaKnown RBP2.23□□□□□ -2.05
LOC1YFR001W RPS23BP0CX30 145 aa2.23□□□□□ -2.05
LOC1YFR001W YKL162CP36052 402 aa2.23□□□□□ -2.05
LOC1YFR001W ASP1P38986 381 aaPredicted RBP2.23□□□□□ -2.05
LOC1YFR001W SOP4P39543 234 aaPredicted RBP2.23□□□□□ -2.05
LOC1YFR001W AIM20P40451 204 aa2.23□□□□□ -2.05
LOC1YFR001W ACT1P60010 375 aaKnown RBP2.23□□□□□ -2.05
LOC1YFR001W IRC4Q03036 179 aa2.23□□□□□ -2.05
LOC1YFR001W YPL264CQ08980 353 aa2.23□□□□□ -2.05
LOC1YFR001W TFC7Q12415 435 aa2.23□□□□□ -2.05
LOC1YFR001W CDC37P06101 506 aaKnown RBP2.22□□□□□ -2.05
LOC1YFR001W HPR1P17629 752 aaKnown RBP2.22□□□□□ -2.05
LOC1YFR001W TRX1P22217 103 aaKnown RBP2.22□□□□□ -2.05
LOC1YFR001W YHR035WP38769 630 aa2.22□□□□□ -2.05
LOC1YFR001W OKP1P53298 406 aa2.22□□□□□ -2.05
LOC1YFR001W PRO2P54885 456 aaKnown RBP2.22□□□□□ -2.05
LOC1YFR001W SNX41Q04053 625 aa2.22□□□□□ -2.05
LOC1YFR001W VPS20Q04272 221 aa2.22□□□□□ -2.05
LOC1YFR001W CBP2P03874 630 aaPredicted RBP2.21□□□□□ -2.06
LOC1YFR001W INO2P26798 304 aa2.21□□□□□ -2.06
LOC1YFR001W ARO4P32449 370 aaKnown RBP2.21□□□□□ -2.06
LOC1YFR001W ZRT1P32804 376 aa2.21□□□□□ -2.06
LOC1YFR001W SUR1P33300 382 aa2.21□□□□□ -2.06
LOC1YFR001W ECM14P38836 430 aa2.21□□□□□ -2.06
LOC1YFR001W IGO1P53897 168 aa2.21□□□□□ -2.06
LOC1YFR001W DIA1P54005 336 aa2.21□□□□□ -2.06
LOC1YFR001W YPL080CQ02826 108 aa2.21□□□□□ -2.06
LOC1YFR001W CAB5Q03941 241 aa2.21□□□□□ -2.06
LOC1YFR001W MGR3Q04472 501 aa2.21□□□□□ -2.06
LOC1YFR001W GTO3Q04806 366 aa2.21□□□□□ -2.06
LOC1YFR001W YOR292CQ08743 309 aa2.21□□□□□ -2.06
LOC1YFR001W ERP3Q12403 225 aa2.21□□□□□ -2.06
LOC1YFR001W PAA1Q12447 191 aaKnown RBP2.21□□□□□ -2.06
LOC1YFR001W DAL5P15365 543 aa2.2□□□□□ -2.06
LOC1YFR001W MSS116P15424 664 aaKnown RBP2.2□□□□□ -2.06
LOC1YFR001W PET18P25362 215 aa2.2□□□□□ -2.06
LOC1YFR001W SWC5P38326 303 aa2.2□□□□□ -2.06
LOC1YFR001W FET3P38993 636 aa2.2□□□□□ -2.06
LOC1YFR001W END3P39013 349 aa2.2□□□□□ -2.06
LOC1YFR001W SSO2P39926 295 aa2.2□□□□□ -2.06
LOC1YFR001W YJL144WP47009 104 aa2.2□□□□□ -2.06
LOC1YFR001W YDR222WQ04925 415 aa2.2□□□□□ -2.06
LOC1YFR001W YLR446WQ06204 433 aa2.2□□□□□ -2.06
LOC1YFR001W HRT1Q08273 121 aa2.2□□□□□ -2.06
LOC1YFR001W SAM4Q08985 325 aaKnown RBP2.2□□□□□ -2.06
LOC1YFR001W VIK1Q12045 647 aa2.2□□□□□ -2.06
LOC1YFR001W UTP23Q12339 254 aaKnown RBP2.2□□□□□ -2.06
LOC1YFR001W GPX1P36014 167 aa2.19□□□□□ -2.06
LOC1YFR001W MCH2P36032 473 aa2.19□□□□□ -2.06
LOC1YFR001W EDC2P40023 145 aaPredicted RBP2.19□□□□□ -2.06
LOC1YFR001W YFR045WP43617 309 aa2.19□□□□□ -2.06
LOC1YFR001W YLR297WQ05899 129 aa2.19□□□□□ -2.06
LOC1YFR001W SGT2Q12118 346 aaKnown RBP2.19□□□□□ -2.06
LOC1YFR001W YPR096CO13587 100 aa2.18□□□□□ -2.06
LOC1YFR001W TDH3P00359 332 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
LOC1YFR001W DAL81P21657 970 aa2.18□□□□□ -2.06
LOC1YFR001W KRR1P25586 316 aaPredicted RBP2.18□□□□□ -2.06
LOC1YFR001W TKL2P33315 681 aa2.18□□□□□ -2.06
LOC1YFR001W AIM29P36154 155 aa2.18□□□□□ -2.06
LOC1YFR001W YBR062CP38239 180 aa2.18□□□□□ -2.06
LOC1YFR001W SMC2P38989 1170 aaKnown RBP2.18□□□□□ -2.06
LOC1YFR001W YNL040WP53960 456 aaPredicted RBP2.18□□□□□ -2.06
LOC1YFR001W ABZ2Q03266 374 aa2.18□□□□□ -2.06
LOC1YFR001W SEC13Q04491 297 aaKnown RBP2.18□□□□□ -2.06
LOC1YFR001W DXO1Q06349 442 aa2.18□□□□□ -2.06
LOC1YFR001W PBP4Q07362 185 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 41.9 ms