RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C CBF5P33322 483 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
CDC40YDR364C SDH3P33421 198 aa3.04□□□□□ -1.92
CDC40YDR364C MRPL37P36532 105 aa3.04□□□□□ -1.92
CDC40YDR364C QDR3P38227 689 aa3.04□□□□□ -1.92
CDC40YDR364C IML3P38265 245 aa3.04□□□□□ -1.92
CDC40YDR364C YER034WP40022 185 aaKnown RBP3.04□□□□□ -1.92
CDC40YDR364C YER079WP40052 210 aaKnown RBP3.04□□□□□ -1.92
CDC40YDR364C AIM20P40451 204 aa3.04□□□□□ -1.92
CDC40YDR364C HPM1P40481 377 aa3.04□□□□□ -1.92
CDC40YDR364C SNL1P40548 159 aa3.04□□□□□ -1.92
CDC40YDR364C SAS2P40963 338 aa3.04□□□□□ -1.92
CDC40YDR364C YJR011CP47086 261 aaPredicted RBP3.04□□□□□ -1.92
CDC40YDR364C COQ5P49017 307 aa3.04□□□□□ -1.92
CDC40YDR364C YPT32P51996 222 aaKnown RBP3.04□□□□□ -1.92
CDC40YDR364C NBP35P52920 328 aa3.04□□□□□ -1.92
CDC40YDR364C PNC1P53184 216 aaKnown RBP3.04□□□□□ -1.92
CDC40YDR364C EMI1Q04406 187 aa3.04□□□□□ -1.92
CDC40YDR364C DYN3Q04949 312 aa3.04□□□□□ -1.92
CDC40YDR364C GGA1Q06336 557 aa3.04□□□□□ -1.92
CDC40YDR364C TPO3Q06451 622 aa3.04□□□□□ -1.92
CDC40YDR364C ASA1Q06822 443 aa3.04□□□□□ -1.92
CDC40YDR364C SSK1Q07084 712 aa3.04□□□□□ -1.92
CDC40YDR364C NSE1Q07913 336 aa3.04□□□□□ -1.92
CDC40YDR364C PEX27Q08580 376 aa3.04□□□□□ -1.92
CDC40YDR364C DAP1Q12091 152 aa3.04□□□□□ -1.92
CDC40YDR364C RUP1Q12242 671 aa3.04□□□□□ -1.92
CDC40YDR364C RRP42Q12277 265 aaPredicted RBP3.04□□□□□ -1.92
CDC40YDR364C PST1Q12355 444 aa3.04□□□□□ -1.92
CDC40YDR364C YLR111WQ12528 110 aa3.04□□□□□ -1.92
CDC40YDR364C FMP27Q06179 2628 aa3.04□□□□□ -1.92
CDC40YDR364C THP2O13539 261 aaKnown RBP3.03□□□□□ -1.92
CDC40YDR364C RAS2P01120 322 aaKnown RBP3.03□□□□□ -1.92
CDC40YDR364C DST1P07273 309 aa3.03□□□□□ -1.92
CDC40YDR364C YKR104WP0CE69 306 aa3.03□□□□□ -1.92
CDC40YDR364C GAL3P13045 520 aa3.03□□□□□ -1.92
CDC40YDR364C PET18P25362 215 aa3.03□□□□□ -1.92
CDC40YDR364C CIN8P27895 1000 aa3.03□□□□□ -1.92
CDC40YDR364C APE2P32454 952 aaKnown RBP3.03□□□□□ -1.92
CDC40YDR364C CAF4P36130 643 aa3.03□□□□□ -1.92
CDC40YDR364C YCR087C-AP37263 153 aa3.03□□□□□ -1.92
CDC40YDR364C ATP3P38077 311 aaKnown RBP3.03□□□□□ -1.92
CDC40YDR364C LAG1P38703 411 aa3.03□□□□□ -1.92
CDC40YDR364C INM1P38710 295 aa3.03□□□□□ -1.92
CDC40YDR364C GAT2P40209 560 aa3.03□□□□□ -1.92
CDC40YDR364C PAC11P40960 533 aa3.03□□□□□ -1.92
CDC40YDR364C IAH1P41734 238 aa3.03□□□□□ -1.92
CDC40YDR364C SEC27P41811 889 aaKnown RBP3.03□□□□□ -1.92
CDC40YDR364C DIM1P41819 318 aaKnown RBP3.03□□□□□ -1.92
CDC40YDR364C BIR1P47134 954 aa3.03□□□□□ -1.92
CDC40YDR364C YJR149WP47177 404 aa3.03□□□□□ -1.92
CDC40YDR364C GTO1P48239 356 aa3.03□□□□□ -1.92
CDC40YDR364C NAS6P50086 228 aa3.03□□□□□ -1.92
CDC40YDR364C PKP2P53170 491 aa3.03□□□□□ -1.92
CDC40YDR364C COS6P53344 381 aa3.03□□□□□ -1.92
CDC40YDR364C MPP6P53725 186 aaPredicted RBP3.03□□□□□ -1.92
CDC40YDR364C ZRG17P53735 605 aa3.03□□□□□ -1.92
CDC40YDR364C YNL140CP53910 189 aa3.03□□□□□ -1.92
CDC40YDR364C MMT1Q03218 510 aa3.03□□□□□ -1.92
CDC40YDR364C ECM11Q04110 302 aa3.03□□□□□ -1.92
CDC40YDR364C ARP10Q04549 284 aa3.03□□□□□ -1.92
CDC40YDR364C ECM18Q04623 453 aa3.03□□□□□ -1.92
CDC40YDR364C SWF1Q04629 336 aa3.03□□□□□ -1.92
CDC40YDR364C SPC2Q04969 178 aa3.03□□□□□ -1.92
CDC40YDR364C YTH1Q06102 208 aaPredicted RBP3.03□□□□□ -1.92
CDC40YDR364C ARR1Q06596 294 aa3.03□□□□□ -1.92
CDC40YDR364C GRS2Q06817 618 aa3.03□□□□□ -1.92
CDC40YDR364C ATG10Q07879 167 aa3.03□□□□□ -1.92
CDC40YDR364C RRT8Q08219 342 aa3.03□□□□□ -1.92
CDC40YDR364C MUM3Q08750 479 aa3.03□□□□□ -1.92
CDC40YDR364C PFA4Q12006 378 aa3.03□□□□□ -1.92
CDC40YDR364C YPL245WQ12179 454 aaKnown RBP3.03□□□□□ -1.92
CDC40YDR364C YPR011CQ12251 326 aa3.03□□□□□ -1.92
CDC40YDR364C YCL012CQ8J0M4 134 aa3.03□□□□□ -1.92
CDC40YDR364C ATP6P00854 259 aa3.02□□□□□ -1.93
CDC40YDR364C SPT3P06844 337 aa3.02□□□□□ -1.93
CDC40YDR364C SPT15P13393 240 aaKnown RBP3.02□□□□□ -1.93
CDC40YDR364C MSS116P15424 664 aaKnown RBP3.02□□□□□ -1.93
CDC40YDR364C YSR3P23501 404 aa3.02□□□□□ -1.93
CDC40YDR364C HXT2P23585 541 aa3.02□□□□□ -1.93
CDC40YDR364C SLM5P25345 492 aaKnown RBP3.02□□□□□ -1.93
CDC40YDR364C TFC1P32367 649 aa3.02□□□□□ -1.93
CDC40YDR364C DPH5P32469 300 aaPredicted RBP3.02□□□□□ -1.93
CDC40YDR364C SOL2P37262 315 aa3.02□□□□□ -1.93
CDC40YDR364C YBR139WP38109 508 aa3.02□□□□□ -1.93
CDC40YDR364C IST2P38250 946 aa3.02□□□□□ -1.93
CDC40YDR364C BMT2P38278 337 aa3.02□□□□□ -1.93
CDC40YDR364C YHR127WP38833 243 aaKnown RBP3.02□□□□□ -1.93
CDC40YDR364C ALP1P38971 573 aa3.02□□□□□ -1.93
CDC40YDR364C GIM4P40005 111 aaKnown RBP3.02□□□□□ -1.93
CDC40YDR364C HXT9P40885 567 aa3.02□□□□□ -1.93
CDC40YDR364C FMP33P46998 180 aa3.02□□□□□ -1.93
CDC40YDR364C YJR030CP47101 745 aa3.02□□□□□ -1.93
CDC40YDR364C EMC2P47133 292 aaKnown RBP3.02□□□□□ -1.93
CDC40YDR364C MDM34P53083 459 aa3.02□□□□□ -1.93
CDC40YDR364C YGR015CP53208 328 aa3.02□□□□□ -1.93
CDC40YDR364C GPI1P53306 609 aa3.02□□□□□ -1.93
CDC40YDR364C TDA7P53882 636 aaPredicted RBP3.02□□□□□ -1.93
CDC40YDR364C GIP3Q03016 1276 aa3.02□□□□□ -1.93
CDC40YDR364C MET31Q03081 177 aa3.02□□□□□ -1.93
CDC40YDR364C YMR010WQ03687 405 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms