RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	KTR6	P54070	446 aa		3.59	□□□□□ -1.83
TRP4	YDR354W	LIP2	Q06005	328 aa		3.59	□□□□□ -1.83
TRP4	YDR354W	NDE2	Q07500	545 aa		3.59	□□□□□ -1.83
TRP4	YDR354W	AEP3	Q12089	606 aa		3.59	□□□□□ -1.83
TRP4	YDR354W	YGK3	Q12222	375 aa	Predicted RBP	3.59	□□□□□ -1.83
TRP4	YDR354W	YOL107W	Q12239	342 aa		3.59	□□□□□ -1.83
TRP4	YDR354W	JID1	Q12350	301 aa		3.59	□□□□□ -1.83
TRP4	YDR354W	GIS3	Q12418	502 aa		3.59	□□□□□ -1.83
TRP4	YDR354W	FLO11	P08640	1367 aa		3.59	□□□□□ -1.83
TRP4	YDR354W	UBR1	P19812	1950 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	CDC10	P25342	322 aa	Known RBP	3.58	□□□□□ -1.84
TRP4	YDR354W	BUD2	P33314	1104 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	YKL097C	P34245	136 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	SPT10	P35208	640 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	YKL070W	P36087	169 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	PFF1	P38244	976 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	SLM4	P38247	162 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	OXA1	P39952	402 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	YER085C	P40058	173 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	SMX2	P40204	77 aa	Known RBP	3.58	□□□□□ -1.84
TRP4	YDR354W	DFG10	P40526	253 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	YHC3	P47040	408 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	ABM1	P47146	123 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	KAP114	P53067	1004 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	STD1	Q02794	444 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	UBX2	Q04228	584 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	DIB1	Q06819	143 aa	Predicted RBP	3.58	□□□□□ -1.84
TRP4	YDR354W	CMC2	Q3E7A4	109 aa		3.58	□□□□□ -1.84
TRP4	YDR354W	JIP3	O13555	125 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	RPL24A	P04449	155 aa	Known RBP	3.57	□□□□□ -1.84
TRP4	YDR354W	STE3	P06783	470 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	UGA1	P17649	471 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	DAL81	P21657	970 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	AAT2	P23542	418 aa	Known RBP	3.57	□□□□□ -1.84
TRP4	YDR354W	EXG1	P23776	448 aa	Known RBP	3.57	□□□□□ -1.84
TRP4	YDR354W	SEC14	P24280	304 aa	Known RBP	3.57	□□□□□ -1.84
TRP4	YDR354W	CYM1	P32898	989 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	BAT1	P38891	393 aa	Known RBP	3.57	□□□□□ -1.84
TRP4	YDR354W	GAA1	P39012	614 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	END3	P39013	349 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	RIO2	P40160	425 aa	Known RBP	3.57	□□□□□ -1.84
TRP4	YDR354W	YPS6	P40583	537 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	YFH7	P43591	353 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	LCB3	P47013	409 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	GTO1	P48239	356 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	NBP1	P52919	319 aa	Predicted RBP	3.57	□□□□□ -1.84
TRP4	YDR354W	MND1	P53102	219 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	YGL114W	P53134	725 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	YNL134C	P53912	376 aa	Known RBP	3.57	□□□□□ -1.84
TRP4	YDR354W	PET117	Q02771	107 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	ARR2	Q06597	130 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	CMS1	Q07897	291 aa	Known RBP	3.57	□□□□□ -1.84
TRP4	YDR354W	BRX1	Q08235	291 aa	Known RBP	3.57	□□□□□ -1.84
TRP4	YDR354W	VIK1	Q12045	647 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	RIO1	Q12196	484 aa	Known RBP	3.57	□□□□□ -1.84
TRP4	YDR354W	NCA2	Q12374	616 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	MTR10	Q99189	972 aa		3.57	□□□□□ -1.84
TRP4	YDR354W	PDE2	P06776	526 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	RAD3	P06839	778 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	ARG80	P07249	177 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	CAP2	P13517	287 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	CKA2	P19454	339 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	YBR032W	P38223	100 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	TAE1	P38340	232 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	MMS21	P38632	267 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	YHR045W	P38775	560 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	STN1	P38960	494 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	SER3	P40054	469 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	FMC1	P40491	155 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	EGT2	P42835	1041 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	RPC17	P47076	161 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	CRH1	P53301	507 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	MMT1	Q03218	510 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	AIM33	Q04516	312 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	SUE1	Q06524	206 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	GPN3	Q06543	272 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	YPR078C	Q06813	372 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	YLL007C	Q07799	665 aa		3.56	□□□□□ -1.84
TRP4	YDR354W	SAR1	P20606	190 aa	Known RBP	3.55	□□□□□ -1.84
TRP4	YDR354W	RAD5	P32849	1169 aa	Predicted RBP	3.55	□□□□□ -1.84
TRP4	YDR354W	MID2	P36027	376 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	YKL071W	P36086	256 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
TRP4	YDR354W	YHR182W	P38870	785 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	LCP5	P40079	357 aa	Predicted RBP	3.55	□□□□□ -1.84
TRP4	YDR354W	SCC4	P40090	624 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	GAT2	P40209	560 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	ILM1	P47155	203 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	TOM22	P49334	152 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	BNS1	P50084	137 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	MST27	P53176	234 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	YGR117C	P53270	476 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	APJ1	P53940	528 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	YNL040W	P53960	456 aa	Predicted RBP	3.55	□□□□□ -1.84
TRP4	YDR354W	SPO19	Q03029	223 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	TDA1	Q03533	586 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	BNA7	Q04066	261 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	FAR8	Q05040	523 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	TAF10	Q12030	206 aa		3.55	□□□□□ -1.84
TRP4	YDR354W	BTS1	Q12051	335 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 91.3 ms