RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR008CYDR008C YPR1Q12458 312 aa1.33□□□□□ -2.2
YDR008CYDR008C REP1P03871 373 aa1.32□□□□□ -2.2
YDR008CYDR008C CBP2P03874 630 aaPredicted RBP1.32□□□□□ -2.2
YDR008CYDR008C VMA2P16140 517 aaKnown RBP1.32□□□□□ -2.2
YDR008CYDR008C COX10P21592 462 aa1.32□□□□□ -2.2
YDR008CYDR008C CYM1P32898 989 aa1.32□□□□□ -2.2
YDR008CYDR008C SRB2P34162 210 aa1.32□□□□□ -2.2
YDR008CYDR008C YKL187CP34231 750 aa1.32□□□□□ -2.2
YDR008CYDR008C PRY2P36110 329 aa1.32□□□□□ -2.2
YDR008CYDR008C FRM2P37261 193 aa1.32□□□□□ -2.2
YDR008CYDR008C RCK1P38622 512 aa1.32□□□□□ -2.2
YDR008CYDR008C POP2P39008 433 aa1.32□□□□□ -2.2
YDR008CYDR008C DSE1P40077 573 aa1.32□□□□□ -2.2
YDR008CYDR008C SLM1P40485 686 aa1.32□□□□□ -2.2
YDR008CYDR008C PMT4P46971 762 aa1.32□□□□□ -2.2
YDR008CYDR008C SDS23P53172 527 aa1.32□□□□□ -2.2
YDR008CYDR008C YGR266WP53326 701 aa1.32□□□□□ -2.2
YDR008CYDR008C ARC18Q05933 178 aaKnown RBP1.32□□□□□ -2.2
YDR008CYDR008C YDR018CQ12185 396 aa1.32□□□□□ -2.2
YDR008CYDR008C RRP42Q12277 265 aaPredicted RBP1.32□□□□□ -2.2
YDR008CYDR008C UTP23Q12339 254 aaKnown RBP1.32□□□□□ -2.2
YDR008CYDR008C PRM4Q12498 284 aa1.32□□□□□ -2.2
YDR008CYDR008C CDC37P06101 506 aaKnown RBP1.31□□□□□ -2.2
YDR008CYDR008C RAD7P06779 565 aa1.31□□□□□ -2.2
YDR008CYDR008C YPS1P32329 569 aa1.31□□□□□ -2.2
YDR008CYDR008C IME2P32581 645 aa1.31□□□□□ -2.2
YDR008CYDR008C MRPL6P32904 214 aa1.31□□□□□ -2.2
YDR008CYDR008C SUR1P33300 382 aa1.31□□□□□ -2.2
YDR008CYDR008C CSE1P33307 960 aa1.31□□□□□ -2.2
YDR008CYDR008C YHR035WP38769 630 aa1.31□□□□□ -2.2
YDR008CYDR008C LIN1P38852 340 aaPredicted RBP1.31□□□□□ -2.2
YDR008CYDR008C ASP1P38986 381 aaPredicted RBP1.31□□□□□ -2.2
YDR008CYDR008C BUD13P46947 266 aaPredicted RBP1.31□□□□□ -2.2
YDR008CYDR008C FYV8P46949 817 aaKnown RBP1.31□□□□□ -2.2
YDR008CYDR008C SHE4P51534 789 aa1.31□□□□□ -2.2
YDR008CYDR008C TPC1P53257 314 aa1.31□□□□□ -2.2
YDR008CYDR008C SMD1Q02260 146 aaPredicted RBP1.31□□□□□ -2.2
YDR008CYDR008C YPL080CQ02826 108 aa1.31□□□□□ -2.2
YDR008CYDR008C CAB5Q03941 241 aa1.31□□□□□ -2.2
YDR008CYDR008C PBP4Q07362 185 aaKnown RBP1.31□□□□□ -2.2
YDR008CYDR008C PGC1Q08959 321 aa1.31□□□□□ -2.2
YDR008CYDR008C IES3Q12345 250 aa1.31□□□□□ -2.2
YDR008CYDR008C DFM1Q12743 341 aaKnown RBP1.31□□□□□ -2.2
YDR008CYDR008C IZH4Q99393 312 aa1.31□□□□□ -2.2
YDR008CYDR008C VPS1P21576 704 aaKnown RBP1.3□□□□□ -2.2
YDR008CYDR008C RPL16BP26785 198 aaKnown RBP1.3□□□□□ -2.2
YDR008CYDR008C SWC5P38326 303 aa1.3□□□□□ -2.2
YDR008CYDR008C TDA11P38854 504 aa1.3□□□□□ -2.2
YDR008CYDR008C SSO2P39926 295 aa1.3□□□□□ -2.2
YDR008CYDR008C EDC2P40023 145 aaPredicted RBP1.3□□□□□ -2.2
YDR008CYDR008C AIM20P40451 204 aa1.3□□□□□ -2.2
YDR008CYDR008C COS4P43542 379 aa1.3□□□□□ -2.2
YDR008CYDR008C YFL040WP43562 540 aa1.3□□□□□ -2.2
YDR008CYDR008C ECO1P43605 281 aa1.3□□□□□ -2.2
YDR008CYDR008C CPR7P47103 393 aa1.3□□□□□ -2.2
YDR008CYDR008C YNR066CP53752 436 aa1.3□□□□□ -2.2
YDR008CYDR008C SNX41Q04053 625 aa1.3□□□□□ -2.2
YDR008CYDR008C CSI1Q04368 295 aa1.3□□□□□ -2.2
YDR008CYDR008C YDR114CQ04597 100 aa1.3□□□□□ -2.2
YDR008CYDR008C ECM19Q06011 112 aa1.3□□□□□ -2.2
YDR008CYDR008C YLR012CQ07927 99 aa1.3□□□□□ -2.2
YDR008CYDR008C YPR063CQ12160 140 aa1.3□□□□□ -2.2
YDR008CYDR008C TRM10Q12400 293 aa1.3□□□□□ -2.2
YDR008CYDR008C LAG2Q92325 660 aa1.3□□□□□ -2.2
YDR008CYDR008C TDH3P00359 332 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
YDR008CYDR008C HPR1P17629 752 aaKnown RBP1.29□□□□□ -2.2
YDR008CYDR008C PET18P25362 215 aa1.29□□□□□ -2.2
YDR008CYDR008C CDC13P32797 924 aaKnown RBP1.29□□□□□ -2.2
YDR008CYDR008C AIM29P36154 155 aa1.29□□□□□ -2.2
YDR008CYDR008C PET8P38921 284 aa1.29□□□□□ -2.2
YDR008CYDR008C RRG9P40156 214 aa1.29□□□□□ -2.2
YDR008CYDR008C NAS2P40555 220 aa1.29□□□□□ -2.2
YDR008CYDR008C SWC4P53201 476 aa1.29□□□□□ -2.2
YDR008CYDR008C VOA1P53262 265 aa1.29□□□□□ -2.2
YDR008CYDR008C DIA1P54005 336 aa1.29□□□□□ -2.2
YDR008CYDR008C MIM1Q08176 113 aa1.29□□□□□ -2.2
YDR008CYDR008C YPL278CQ08990 100 aa1.29□□□□□ -2.2
YDR008CYDR008C RTC5Q12108 567 aaKnown RBP1.29□□□□□ -2.2
YDR008CYDR008C ERP3Q12403 225 aa1.29□□□□□ -2.2
YDR008CYDR008C PRP46Q12417 451 aaPredicted RBP1.29□□□□□ -2.2
YDR008CYDR008C SAL1D6W196 494 aa1.28□□□□□ -2.2
YDR008CYDR008C CAR2P07991 424 aaKnown RBP1.28□□□□□ -2.2
YDR008CYDR008C SAR1P20606 190 aaKnown RBP1.28□□□□□ -2.2
YDR008CYDR008C IFM1P25038 676 aa1.28□□□□□ -2.2
YDR008CYDR008C RPB9P27999 122 aa1.28□□□□□ -2.2
YDR008CYDR008C IMP1P28627 190 aa1.28□□□□□ -2.2
YDR008CYDR008C AGA2P32781 87 aa1.28□□□□□ -2.2
YDR008CYDR008C BUD2P33314 1104 aa1.28□□□□□ -2.2
YDR008CYDR008C SWD2P36104 329 aaPredicted RBP1.28□□□□□ -2.2
YDR008CYDR008C ECM14P38836 430 aa1.28□□□□□ -2.2
YDR008CYDR008C FET3P38993 636 aa1.28□□□□□ -2.2
YDR008CYDR008C SOP4P39543 234 aaPredicted RBP1.28□□□□□ -2.2
YDR008CYDR008C YIL012WP40551 113 aa1.28□□□□□ -2.2
YDR008CYDR008C INA22P40576 216 aa1.28□□□□□ -2.2
YDR008CYDR008C RPN14P53196 417 aa1.28□□□□□ -2.2
YDR008CYDR008C UBX2Q04228 584 aa1.28□□□□□ -2.2
YDR008CYDR008C SEC13Q04491 297 aaKnown RBP1.28□□□□□ -2.2
YDR008CYDR008C YOR292CQ08743 309 aa1.28□□□□□ -2.2
YDR008CYDR008C RPS23AP0CX29 145 aaKnown RBP1.27□□□□□ -2.21
YDR008CYDR008C RPS23BP0CX30 145 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms