RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W DTD1Q07648 150 aaKnown RBP2.21□□□□□ -2.06
SHS1YDL225W IES4Q08561 116 aa2.21□□□□□ -2.06
SHS1YDL225W YPR1Q12458 312 aa2.21□□□□□ -2.06
SHS1YDL225W FLO11P08640 1367 aa2.2□□□□□ -2.06
SHS1YDL225W CAR2P07991 424 aaKnown RBP2.2□□□□□ -2.06
SHS1YDL225W ERD1P16151 362 aa2.2□□□□□ -2.06
SHS1YDL225W ZRT1P32804 376 aa2.2□□□□□ -2.06
SHS1YDL225W CYM1P32898 989 aa2.2□□□□□ -2.06
SHS1YDL225W RFT1P38206 574 aaPredicted RBP2.2□□□□□ -2.06
SHS1YDL225W YHR035WP38769 630 aa2.2□□□□□ -2.06
SHS1YDL225W PET8P38921 284 aa2.2□□□□□ -2.06
SHS1YDL225W UFE1P41834 346 aa2.2□□□□□ -2.06
SHS1YDL225W SDS23P53172 527 aa2.2□□□□□ -2.06
SHS1YDL225W VOA1P53262 265 aa2.2□□□□□ -2.06
SHS1YDL225W INP2Q03824 705 aa2.2□□□□□ -2.06
SHS1YDL225W UBX2Q04228 584 aa2.2□□□□□ -2.06
SHS1YDL225W UTP15Q04305 513 aaKnown RBP2.2□□□□□ -2.06
SHS1YDL225W MIM1Q08176 113 aa2.2□□□□□ -2.06
SHS1YDL225W FUS3P16892 353 aaKnown RBP2.19□□□□□ -2.06
SHS1YDL225W COX10P21592 462 aa2.19□□□□□ -2.06
SHS1YDL225W YKL187CP34231 750 aa2.19□□□□□ -2.06
SHS1YDL225W DSE1P40077 573 aa2.19□□□□□ -2.06
SHS1YDL225W RRG9P40156 214 aa2.19□□□□□ -2.06
SHS1YDL225W OKP1P53298 406 aa2.19□□□□□ -2.06
SHS1YDL225W SNX41Q04053 625 aa2.19□□□□□ -2.06
SHS1YDL225W MRX8Q05473 314 aa2.19□□□□□ -2.06
SHS1YDL225W DCP1Q12517 231 aaPredicted RBP2.19□□□□□ -2.06
SHS1YDL225W SAR1P20606 190 aaKnown RBP2.18□□□□□ -2.06
SHS1YDL225W MRPL20P22354 195 aaPredicted RBP2.18□□□□□ -2.06
SHS1YDL225W ZRT3P34240 503 aa2.18□□□□□ -2.06
SHS1YDL225W FRM2P37261 193 aa2.18□□□□□ -2.06
SHS1YDL225W CDC40P40968 455 aaPredicted RBP2.18□□□□□ -2.06
SHS1YDL225W HST4P53688 370 aa2.18□□□□□ -2.06
SHS1YDL225W APC4Q04601 652 aa2.18□□□□□ -2.06
SHS1YDL225W ECM19Q06011 112 aa2.18□□□□□ -2.06
SHS1YDL225W VAC14Q06708 880 aa2.18□□□□□ -2.06
SHS1YDL225W YPL245WQ12179 454 aaKnown RBP2.18□□□□□ -2.06
SHS1YDL225W UTP23Q12339 254 aaKnown RBP2.18□□□□□ -2.06
SHS1YDL225W BI3Q9ZZW7 517 aa2.18□□□□□ -2.06
SHS1YDL225W CKA2P19454 339 aa2.18□□□□□ -2.06
SHS1YDL225W SOP4P39543 234 aaPredicted RBP2.18□□□□□ -2.06
SHS1YDL225W YGR266WP53326 701 aa2.18□□□□□ -2.06
SHS1YDL225W YNR066CP53752 436 aa2.18□□□□□ -2.06
SHS1YDL225W YDL211CQ12121 372 aa2.18□□□□□ -2.06
SHS1YDL225W PFK27Q12471 397 aaPredicted RBP2.18□□□□□ -2.06
SHS1YDL225W INO2P26798 304 aa2.17□□□□□ -2.06
SHS1YDL225W FMT1P32785 401 aa2.17□□□□□ -2.06
SHS1YDL225W SKG6P32900 734 aaPredicted RBP2.17□□□□□ -2.06
SHS1YDL225W MCH2P36032 473 aa2.17□□□□□ -2.06
SHS1YDL225W CTM1P38818 585 aa2.17□□□□□ -2.06
SHS1YDL225W BDH1P39714 382 aa2.17□□□□□ -2.06
SHS1YDL225W LOH1P47055 219 aa2.17□□□□□ -2.06
SHS1YDL225W RRG8Q06109 277 aa2.17□□□□□ -2.06
SHS1YDL225W RPB9P27999 122 aa2.16□□□□□ -2.06
SHS1YDL225W TRR2P38816 342 aa2.16□□□□□ -2.06
SHS1YDL225W FRT2P39734 528 aa2.16□□□□□ -2.06
SHS1YDL225W YIL054WP40524 105 aa2.16□□□□□ -2.06
SHS1YDL225W LOC1P43586 204 aaPredicted RBP2.16□□□□□ -2.06
SHS1YDL225W MIC19P43594 170 aa2.16□□□□□ -2.06
SHS1YDL225W YOR292CQ08743 309 aa2.16□□□□□ -2.06
SHS1YDL225W SIA1Q12212 622 aa2.16□□□□□ -2.06
SHS1YDL225W DFM1Q12743 341 aaKnown RBP2.16□□□□□ -2.06
SHS1YDL225W RAD7P06779 565 aa2.15□□□□□ -2.06
SHS1YDL225W CPT1P17898 393 aa2.15□□□□□ -2.06
SHS1YDL225W RPL5P26321 297 aaKnown RBP2.15□□□□□ -2.06
SHS1YDL225W YPC1P38298 316 aa2.15□□□□□ -2.06
SHS1YDL225W YMR262WP38430 313 aa2.15□□□□□ -2.06
SHS1YDL225W RRF1P38771 230 aa2.15□□□□□ -2.06
SHS1YDL225W COX16P47081 118 aa2.15□□□□□ -2.06
SHS1YDL225W PNC1P53184 216 aaKnown RBP2.15□□□□□ -2.06
SHS1YDL225W BIO4P53630 237 aa2.15□□□□□ -2.06
SHS1YDL225W GMC1Q04399 608 aa2.15□□□□□ -2.06
SHS1YDL225W IZH4Q99393 312 aa2.15□□□□□ -2.06
SHS1YDL225W RPL31AP0C2H8 113 aaKnown RBP2.15□□□□□ -2.07
SHS1YDL225W UGA1P17649 471 aa2.15□□□□□ -2.07
SHS1YDL225W DBP3P20447 523 aaKnown RBP2.15□□□□□ -2.07
SHS1YDL225W RPL16BP26785 198 aaKnown RBP2.15□□□□□ -2.07
SHS1YDL225W TPS2P31688 896 aaKnown RBP2.15□□□□□ -2.07
SHS1YDL225W RPC25P35718 212 aa2.15□□□□□ -2.07
SHS1YDL225W PRY2P36110 329 aa2.15□□□□□ -2.07
SHS1YDL225W SLM1P40485 686 aa2.15□□□□□ -2.07
SHS1YDL225W YIR035CP40579 254 aa2.15□□□□□ -2.07
SHS1YDL225W PFS2P42841 465 aaKnown RBP2.15□□□□□ -2.07
SHS1YDL225W YGL118CP53132 145 aa2.15□□□□□ -2.07
SHS1YDL225W ARP5P53946 755 aa2.15□□□□□ -2.07
SHS1YDL225W SPO19Q03029 223 aa2.15□□□□□ -2.07
SHS1YDL225W ECM18Q04623 453 aa2.15□□□□□ -2.07
SHS1YDL225W YLR446WQ06204 433 aa2.15□□□□□ -2.07
SHS1YDL225W DIB1Q06819 143 aaPredicted RBP2.15□□□□□ -2.07
SHS1YDL225W APC9Q12107 265 aa2.15□□□□□ -2.07
SHS1YDL225W TRM10Q12400 293 aa2.15□□□□□ -2.07
SHS1YDL225W TDH3P00359 332 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
SHS1YDL225W SWD2P36104 329 aaPredicted RBP2.14□□□□□ -2.07
SHS1YDL225W MRPL40P36534 297 aa2.14□□□□□ -2.07
SHS1YDL225W PCL7P40186 285 aa2.14□□□□□ -2.07
SHS1YDL225W CAX4P53223 239 aa2.14□□□□□ -2.07
SHS1YDL225W APJ1P53940 528 aa2.14□□□□□ -2.07
SHS1YDL225W SMD1Q02260 146 aaPredicted RBP2.14□□□□□ -2.07
SHS1YDL225W TFC7Q12415 435 aa2.14□□□□□ -2.07
SHS1YDL225W LAG2Q92325 660 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 121.4 ms