RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W ABZ2Q03266 374 aa1.89□□□□□ -2.11
UBP1YDL122W TLG1Q03322 224 aa1.89□□□□□ -2.11
UBP1YDL122W VPS71Q03433 280 aa1.89□□□□□ -2.11
UBP1YDL122W UIP4Q08926 304 aa1.89□□□□□ -2.11
UBP1YDL122W RTR2Q12378 196 aa1.89□□□□□ -2.11
UBP1YDL122W PMR1P13586 950 aa1.89□□□□□ -2.11
UBP1YDL122W APA2P22108 325 aa1.89□□□□□ -2.11
UBP1YDL122W ITR1P30605 584 aa1.89□□□□□ -2.11
UBP1YDL122W ITR2P30606 609 aa1.89□□□□□ -2.11
UBP1YDL122W PHA2P32452 334 aa1.89□□□□□ -2.11
UBP1YDL122W BDH2P39713 417 aa1.89□□□□□ -2.11
UBP1YDL122W UTP25P40498 721 aaKnown RBP1.89□□□□□ -2.11
UBP1YDL122W YJR149WP47177 404 aa1.89□□□□□ -2.11
UBP1YDL122W CPR8P53728 308 aa1.89□□□□□ -2.11
UBP1YDL122W GIP3Q03016 1276 aa1.89□□□□□ -2.11
UBP1YDL122W SDC1Q03323 175 aa1.89□□□□□ -2.11
UBP1YDL122W RRB1Q04225 511 aaKnown RBP1.89□□□□□ -2.11
UBP1YDL122W VAC14Q06708 880 aa1.89□□□□□ -2.11
UBP1YDL122W NRT1Q08485 598 aa1.89□□□□□ -2.11
UBP1YDL122W YRM1Q12340 786 aa1.89□□□□□ -2.11
UBP1YDL122W CBP2P03874 630 aaPredicted RBP1.88□□□□□ -2.11
UBP1YDL122W STE3P06783 470 aa1.88□□□□□ -2.11
UBP1YDL122W PUT2P07275 575 aa1.88□□□□□ -2.11
UBP1YDL122W CHO1P08456 276 aa1.88□□□□□ -2.11
UBP1YDL122W YMR085WP0CF18 432 aa1.88□□□□□ -2.11
UBP1YDL122W GCD2P12754 651 aaPredicted RBP1.88□□□□□ -2.11
UBP1YDL122W SAC1P32368 623 aaKnown RBP1.88□□□□□ -2.11
UBP1YDL122W ERG1P32476 496 aaKnown RBP1.88□□□□□ -2.11
UBP1YDL122W SMC2P38989 1170 aaKnown RBP1.88□□□□□ -2.11
UBP1YDL122W MIT1P40002 666 aa1.88□□□□□ -2.11
UBP1YDL122W IDP2P41939 412 aa1.88□□□□□ -2.11
UBP1YDL122W YIP5P53108 310 aa1.88□□□□□ -2.11
UBP1YDL122W YGL117WP53133 265 aa1.88□□□□□ -2.11
UBP1YDL122W BUD32P53323 261 aa1.88□□□□□ -2.11
UBP1YDL122W TIM44Q01852 431 aa1.88□□□□□ -2.11
UBP1YDL122W UTP6Q02354 440 aaKnown RBP1.88□□□□□ -2.11
UBP1YDL122W YML122CQ03207 126 aa1.88□□□□□ -2.11
UBP1YDL122W MMT1Q03218 510 aa1.88□□□□□ -2.11
UBP1YDL122W YDR249CQ03787 373 aa1.88□□□□□ -2.11
UBP1YDL122W VPS20Q04272 221 aa1.88□□□□□ -2.11
UBP1YDL122W MSC3Q05812 728 aa1.88□□□□□ -2.11
UBP1YDL122W RAD34Q06665 692 aa1.88□□□□□ -2.11
UBP1YDL122W CSI2Q08054 341 aa1.88□□□□□ -2.11
UBP1YDL122W THP1Q08231 455 aa1.88□□□□□ -2.11
UBP1YDL122W ACF2Q12168 779 aa1.88□□□□□ -2.11
UBP1YDL122W SRN2Q99176 213 aa1.88□□□□□ -2.11
UBP1YDL122W PEP4P07267 405 aaKnown RBP1.88□□□□□ -2.11
UBP1YDL122W MSI1P13712 422 aa1.88□□□□□ -2.11
UBP1YDL122W MSG5P38590 489 aa1.88□□□□□ -2.11
UBP1YDL122W SSO2P39926 295 aa1.88□□□□□ -2.11
UBP1YDL122W YIL169CP40442 995 aa1.88□□□□□ -2.11
UBP1YDL122W TDA10P42938 290 aa1.88□□□□□ -2.11
UBP1YDL122W MDM34P53083 459 aa1.88□□□□□ -2.11
UBP1YDL122W KTR5P53966 522 aaPredicted RBP1.88□□□□□ -2.11
UBP1YDL122W BCH1Q05029 724 aa1.88□□□□□ -2.11
UBP1YDL122W NDL1Q06568 189 aa1.88□□□□□ -2.11
UBP1YDL122W YLR413WQ06689 675 aa1.88□□□□□ -2.11
UBP1YDL122W GSH2Q08220 491 aa1.88□□□□□ -2.11
UBP1YDL122W HNT3Q08702 217 aa1.88□□□□□ -2.11
UBP1YDL122W YOR365CQ08844 703 aa1.88□□□□□ -2.11
UBP1YDL122W RRP42Q12277 265 aaPredicted RBP1.88□□□□□ -2.11
UBP1YDL122W BPH1P25356 2167 aa1.87□□□□□ -2.11
UBP1YDL122W SAL1D6W196 494 aa1.87□□□□□ -2.11
UBP1YDL122W VPS63O13549 108 aa1.87□□□□□ -2.11
UBP1YDL122W RHB1P25378 209 aa1.87□□□□□ -2.11
UBP1YDL122W ECM25P32525 599 aa1.87□□□□□ -2.11
UBP1YDL122W EMP70P32802 667 aa1.87□□□□□ -2.11
UBP1YDL122W MNS1P32906 549 aa1.87□□□□□ -2.11
UBP1YDL122W YUH1P35127 236 aa1.87□□□□□ -2.11
UBP1YDL122W HEK2P38199 381 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
UBP1YDL122W OLA1P38219 394 aaKnown RBP1.87□□□□□ -2.11
UBP1YDL122W APD1P38281 316 aa1.87□□□□□ -2.11
UBP1YDL122W MNN9P39107 395 aaKnown RBP1.87□□□□□ -2.11
UBP1YDL122W AGE2P40529 298 aa1.87□□□□□ -2.11
UBP1YDL122W AGX1P43567 385 aa1.87□□□□□ -2.11
UBP1YDL122W ROG1P53118 685 aa1.87□□□□□ -2.11
UBP1YDL122W YGR015CP53208 328 aa1.87□□□□□ -2.11
UBP1YDL122W APM1Q00776 475 aaPredicted RBP1.87□□□□□ -2.11
UBP1YDL122W BUR2Q05949 395 aa1.87□□□□□ -2.11
UBP1YDL122W TAZ1Q06510 381 aa1.87□□□□□ -2.11
UBP1YDL122W POS5Q06892 414 aa1.87□□□□□ -2.11
UBP1YDL122W YLL007CQ07799 665 aa1.87□□□□□ -2.11
UBP1YDL122W RKM1Q08961 583 aaPredicted RBP1.87□□□□□ -2.11
UBP1YDL122W CDC37P06101 506 aaKnown RBP1.87□□□□□ -2.11
UBP1YDL122W ADE5,7P07244 802 aaKnown RBP1.87□□□□□ -2.11
UBP1YDL122W ERG11P10614 530 aa1.87□□□□□ -2.11
UBP1YDL122W ATP10P18496 279 aa1.87□□□□□ -2.11
UBP1YDL122W UTR1P21373 530 aa1.87□□□□□ -2.11
UBP1YDL122W PBN1P25580 416 aa1.87□□□□□ -2.11
UBP1YDL122W REC114P32841 428 aa1.87□□□□□ -2.11
UBP1YDL122W BNA4P38169 460 aa1.87□□□□□ -2.11
UBP1YDL122W RFT1P38206 574 aaPredicted RBP1.87□□□□□ -2.11
UBP1YDL122W REE1P40893 198 aa1.87□□□□□ -2.11
UBP1YDL122W KEL2P50090 882 aa1.87□□□□□ -2.11
UBP1YDL122W EKI1Q03764 534 aa1.87□□□□□ -2.11
UBP1YDL122W ADE13Q05911 482 aaKnown RBP1.87□□□□□ -2.11
UBP1YDL122W ATG26Q06321 1198 aa1.87□□□□□ -2.11
UBP1YDL122W YPR172WQ06608 200 aa1.87□□□□□ -2.11
UBP1YDL122W SCEIP03882 235 aa1.86□□□□□ -2.11
UBP1YDL122W RAD52P06778 471 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 59.6 ms