RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C DEP1P31385 405 aa2.88□□□□□ -1.95
RRP42YDL111C YOX1P34161 385 aa2.88□□□□□ -1.95
RRP42YDL111C BFR1P38934 470 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
RRP42YDL111C SOP4P39543 234 aaPredicted RBP2.88□□□□□ -1.95
RRP42YDL111C PRM9P39551 298 aa2.88□□□□□ -1.95
RRP42YDL111C GCN20P43535 752 aaKnown RBP2.88□□□□□ -1.95
RRP42YDL111C UBC13P52490 153 aa2.88□□□□□ -1.95
RRP42YDL111C LSB1P53281 241 aa2.88□□□□□ -1.95
RRP42YDL111C IMP4P53941 290 aaKnown RBP2.88□□□□□ -1.95
RRP42YDL111C PRP38Q00723 242 aaPredicted RBP2.88□□□□□ -1.95
RRP42YDL111C SLT2Q00772 484 aa2.88□□□□□ -1.95
RRP42YDL111C COX20Q04935 205 aa2.88□□□□□ -1.95
RRP42YDL111C RSA1Q08932 381 aa2.88□□□□□ -1.95
RRP42YDL111C BTS1Q12051 335 aa2.88□□□□□ -1.95
RRP42YDL111C TY3A-GQ12173 290 aa2.88□□□□□ -1.95
RRP42YDL111C RBD2Q12270 262 aa2.88□□□□□ -1.95
RRP42YDL111C TY3A-IQ99219 290 aa2.88□□□□□ -1.95
RRP42YDL111C IFM1P25038 676 aa2.87□□□□□ -1.95
RRP42YDL111C NTG1P31378 399 aa2.87□□□□□ -1.95
RRP42YDL111C YKL071WP36086 256 aa2.87□□□□□ -1.95
RRP42YDL111C SDS24P38314 527 aa2.87□□□□□ -1.95
RRP42YDL111C AIM10P39965 576 aaKnown RBP2.87□□□□□ -1.95
RRP42YDL111C FMC1P40491 155 aa2.87□□□□□ -1.95
RRP42YDL111C YPI1P43587 155 aa2.87□□□□□ -1.95
RRP42YDL111C BIO3P50277 480 aa2.87□□□□□ -1.95
RRP42YDL111C YNL134CP53912 376 aaKnown RBP2.87□□□□□ -1.95
RRP42YDL111C ARV1Q06541 321 aa2.87□□□□□ -1.95
RRP42YDL111C RRP42Q12277 265 aaPredicted RBP2.87□□□□□ -1.95
RRP42YDL111C ADH2P00331 348 aaKnown RBP2.86□□□□□ -1.95
RRP42YDL111C ERD1P16151 362 aa2.86□□□□□ -1.95
RRP42YDL111C MET16P18408 261 aaPredicted RBP2.86□□□□□ -1.95
RRP42YDL111C VPS1P21576 704 aaKnown RBP2.86□□□□□ -1.95
RRP42YDL111C DAL82P21705 255 aa2.86□□□□□ -1.95
RRP42YDL111C RRT12P25381 491 aa2.86□□□□□ -1.95
RRP42YDL111C ZIP1P31111 875 aa2.86□□□□□ -1.95
RRP42YDL111C IMP3P32899 183 aaPredicted RBP2.86□□□□□ -1.95
RRP42YDL111C CHL4P38907 458 aa2.86□□□□□ -1.95
RRP42YDL111C NPT1P39683 429 aaKnown RBP2.86□□□□□ -1.95
RRP42YDL111C OXA1P39952 402 aa2.86□□□□□ -1.95
RRP42YDL111C YIA6P40556 373 aa2.86□□□□□ -1.95
RRP42YDL111C GDS1P41913 522 aa2.86□□□□□ -1.95
RRP42YDL111C PET117Q02771 107 aa2.86□□□□□ -1.95
RRP42YDL111C YMR209CQ03648 457 aa2.86□□□□□ -1.95
RRP42YDL111C YET2Q04210 160 aa2.86□□□□□ -1.95
RRP42YDL111C ADH6Q04894 360 aaKnown RBP2.86□□□□□ -1.95
RRP42YDL111C YLR446WQ06204 433 aa2.86□□□□□ -1.95
RRP42YDL111C CTS2Q06350 511 aa2.86□□□□□ -1.95
RRP42YDL111C TLG2Q08144 397 aa2.86□□□□□ -1.95
RRP42YDL111C YPR064WQ12492 139 aa2.86□□□□□ -1.95
RRP42YDL111C RAD3P06839 778 aa2.85□□□□□ -1.95
RRP42YDL111C TFS1P14306 219 aa2.85□□□□□ -1.95
RRP42YDL111C CDC50P25656 391 aa2.85□□□□□ -1.95
RRP42YDL111C INO2P26798 304 aa2.85□□□□□ -1.95
RRP42YDL111C SOL2P37262 315 aa2.85□□□□□ -1.95
RRP42YDL111C SHE1P38200 338 aa2.85□□□□□ -1.95
RRP42YDL111C BMT2P38278 337 aa2.85□□□□□ -1.95
RRP42YDL111C OM14P38325 134 aa2.85□□□□□ -1.95
RRP42YDL111C RCK1P38622 512 aa2.85□□□□□ -1.95
RRP42YDL111C EFM1P38732 585 aa2.85□□□□□ -1.95
RRP42YDL111C YHR045WP38775 560 aa2.85□□□□□ -1.95
RRP42YDL111C PEX22P39718 180 aa2.85□□□□□ -1.95
RRP42YDL111C HEM14P40012 539 aa2.85□□□□□ -1.95
RRP42YDL111C UTP18P40362 594 aaPredicted RBP2.85□□□□□ -1.95
RRP42YDL111C COA1P40452 197 aa2.85□□□□□ -1.95
RRP42YDL111C GAB1P41733 394 aa2.85□□□□□ -1.95
RRP42YDL111C BNA6P43619 295 aa2.85□□□□□ -1.95
RRP42YDL111C YJL118WP47022 219 aa2.85□□□□□ -1.95
RRP42YDL111C TAD2P47058 250 aa2.85□□□□□ -1.95
RRP42YDL111C TIS11P47977 285 aa2.85□□□□□ -1.95
RRP42YDL111C YGR015CP53208 328 aa2.85□□□□□ -1.95
RRP42YDL111C CPD1P53314 239 aa2.85□□□□□ -1.95
RRP42YDL111C ALG11P53954 548 aaKnown RBP2.85□□□□□ -1.95
RRP42YDL111C VBA1Q04301 562 aa2.85□□□□□ -1.95
RRP42YDL111C YLR177WQ06251 628 aa2.85□□□□□ -1.95
RRP42YDL111C RRG7Q08774 242 aaPredicted RBP2.85□□□□□ -1.95
RRP42YDL111C SGT2Q12118 346 aaKnown RBP2.85□□□□□ -1.95
RRP42YDL111C POM33Q12164 279 aa2.85□□□□□ -1.95
RRP42YDL111C YPL245WQ12179 454 aaKnown RBP2.85□□□□□ -1.95
RRP42YDL111C MHP1P43638 1398 aa2.85□□□□□ -1.95
RRP42YDL111C HIS1P00498 297 aaKnown RBP2.84□□□□□ -1.95
RRP42YDL111C RPS14AP06367 137 aaKnown RBP2.84□□□□□ -1.95
RRP42YDL111C PRB1P09232 635 aa2.84□□□□□ -1.95
RRP42YDL111C SPS100P13130 326 aa2.84□□□□□ -1.95
RRP42YDL111C ZRC1P20107 442 aa2.84□□□□□ -1.95
RRP42YDL111C CWP1P28319 239 aa2.84□□□□□ -1.95
RRP42YDL111C ARO4P32449 370 aaKnown RBP2.84□□□□□ -1.95
RRP42YDL111C CSE1P33307 960 aa2.84□□□□□ -1.95
RRP42YDL111C CBF5P33322 483 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
RRP42YDL111C PRS4P38063 326 aaPredicted RBP2.84□□□□□ -1.95
RRP42YDL111C SHE3P38272 425 aaKnown RBP2.84□□□□□ -1.95
RRP42YDL111C YPC1P38298 316 aa2.84□□□□□ -1.95
RRP42YDL111C BAT1P38891 393 aaKnown RBP2.84□□□□□ -1.95
RRP42YDL111C RPS14BP39516 138 aaKnown RBP2.84□□□□□ -1.95
RRP42YDL111C MIG3P39943 394 aa2.84□□□□□ -1.95
RRP42YDL111C DDI1P40087 428 aa2.84□□□□□ -1.95
RRP42YDL111C YJR054WP47114 497 aa2.84□□□□□ -1.95
RRP42YDL111C YPT32P51996 222 aaKnown RBP2.84□□□□□ -1.95
RRP42YDL111C VHT1P53241 593 aa2.84□□□□□ -1.95
RRP42YDL111C SCS7Q03529 384 aa2.84□□□□□ -1.95
RRP42YDL111C ENT5Q03769 411 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms