RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W SYO1Q07395 620 aa5.86□□□□□ -1.47
LDB16YCL005W PSF1Q12488 208 aa5.86□□□□□ -1.47
LDB16YCL005W RPN13O13563 156 aa5.85□□□□□ -1.47
LDB16YCL005W YSF3P0C074 85 aaPredicted RBP5.85□□□□□ -1.47
LDB16YCL005W RPL20AP0CX23 172 aaKnown RBP5.85□□□□□ -1.47
LDB16YCL005W RPL20BP0CX24 172 aaPredicted RBP5.85□□□□□ -1.47
LDB16YCL005W BAR1P12630 587 aa5.85□□□□□ -1.47
LDB16YCL005W ERD2P18414 219 aa5.85□□□□□ -1.47
LDB16YCL005W ARO7P32178 256 aa5.85□□□□□ -1.47
LDB16YCL005W MDL1P33310 695 aa5.85□□□□□ -1.47
LDB16YCL005W RTC2P38279 296 aa5.85□□□□□ -1.47
LDB16YCL005W NVJ1P38881 321 aa5.85□□□□□ -1.47
LDB16YCL005W PZF1P39933 429 aa5.85□□□□□ -1.47
LDB16YCL005W PCL6P40038 420 aa5.85□□□□□ -1.47
LDB16YCL005W QRI7P43122 407 aa5.85□□□□□ -1.47
LDB16YCL005W YJR141WP47172 347 aaPredicted RBP5.85□□□□□ -1.47
LDB16YCL005W VPS73P53142 486 aaKnown RBP5.85□□□□□ -1.47
LDB16YCL005W YGR266WP53326 701 aa5.85□□□□□ -1.47
LDB16YCL005W NCE101Q02820 53 aa5.85□□□□□ -1.47
LDB16YCL005W SNT309Q06091 175 aaPredicted RBP5.85□□□□□ -1.47
LDB16YCL005W ENV7Q12003 364 aa5.85□□□□□ -1.47
LDB16YCL005W REX3Q12090 404 aa5.85□□□□□ -1.47
LDB16YCL005W YDR061WQ12298 539 aa5.85□□□□□ -1.47
LDB16YCL005W CYC1P00044 109 aaPredicted RBP5.84□□□□□ -1.47
LDB16YCL005W RPP2AP05319 106 aaKnown RBP5.84□□□□□ -1.47
LDB16YCL005W CDC31P06704 161 aaKnown RBP5.84□□□□□ -1.47
LDB16YCL005W ERD1P16151 362 aa5.84□□□□□ -1.47
LDB16YCL005W PHO80P20052 293 aa5.84□□□□□ -1.47
LDB16YCL005W RFA1P22336 621 aaKnown RBP5.84□□□□□ -1.47
LDB16YCL005W SPC29P33419 253 aa5.84□□□□□ -1.47
LDB16YCL005W GPX2P38143 162 aa5.84□□□□□ -1.47
LDB16YCL005W YGL235WP53071 178 aa5.84□□□□□ -1.47
LDB16YCL005W YGR067CP53243 804 aa5.84□□□□□ -1.47
LDB16YCL005W PBP1P53297 722 aaKnown RBP5.84□□□□□ -1.47
LDB16YCL005W NRM1P53718 249 aa5.84□□□□□ -1.47
LDB16YCL005W CPR8P53728 308 aa5.84□□□□□ -1.47
LDB16YCL005W YLR460CP54007 376 aa5.84□□□□□ -1.47
LDB16YCL005W YKR005CQ02203 525 aa5.84□□□□□ -1.47
LDB16YCL005W DML1Q03652 475 aa5.84□□□□□ -1.47
LDB16YCL005W RCF1Q03713 159 aa5.84□□□□□ -1.47
LDB16YCL005W SPC19Q03954 165 aa5.84□□□□□ -1.47
LDB16YCL005W SNO4Q04902 237 aa5.84□□□□□ -1.47
LDB16YCL005W YLR173WQ06247 608 aa5.84□□□□□ -1.47
LDB16YCL005W CDA2Q06703 312 aa5.84□□□□□ -1.47
LDB16YCL005W HSP33Q08914 237 aaKnown RBP5.84□□□□□ -1.47
LDB16YCL005W GUP2Q08929 609 aa5.84□□□□□ -1.47
LDB16YCL005W HSP32Q08992 237 aa5.84□□□□□ -1.47
LDB16YCL005W ACF2Q12168 779 aa5.84□□□□□ -1.47
LDB16YCL005W YDL177CQ12257 170 aa5.84□□□□□ -1.47
LDB16YCL005W NPC2Q12408 173 aa5.84□□□□□ -1.47
LDB16YCL005W YGR161W-CQ3E744 92 aa5.84□□□□□ -1.47
LDB16YCL005W DFG16Q99234 619 aa5.84□□□□□ -1.47
LDB16YCL005W YGL041W-AP0C5N3 154 aa5.83□□□□□ -1.48
LDB16YCL005W SEC12P11655 471 aa5.83□□□□□ -1.48
LDB16YCL005W GLK1P17709 500 aaKnown RBP5.83□□□□□ -1.48
LDB16YCL005W FAA1P30624 700 aaKnown RBP5.83□□□□□ -1.48
LDB16YCL005W TIM12P32830 109 aa5.83□□□□□ -1.48
LDB16YCL005W SEC66P33754 206 aa5.83□□□□□ -1.48
LDB16YCL005W JEN1P36035 616 aa5.83□□□□□ -1.48
LDB16YCL005W YBR063CP38083 404 aa5.83□□□□□ -1.48
LDB16YCL005W SHE1P38200 338 aa5.83□□□□□ -1.48
LDB16YCL005W FCY21P40039 528 aa5.83□□□□□ -1.48
LDB16YCL005W FMC1P40491 155 aa5.83□□□□□ -1.48
LDB16YCL005W YIL067CP40514 678 aa5.83□□□□□ -1.48
LDB16YCL005W STB1P42845 420 aa5.83□□□□□ -1.48
LDB16YCL005W YJL055WP47044 245 aa5.83□□□□□ -1.48
LDB16YCL005W ECL1P48235 211 aa5.83□□□□□ -1.48
LDB16YCL005W ASK10P48361 1146 aa5.83□□□□□ -1.48
LDB16YCL005W PGA1P53896 198 aa5.83□□□□□ -1.48
LDB16YCL005W FDC1Q03034 503 aa5.83□□□□□ -1.48
LDB16YCL005W YMR210WQ03649 449 aa5.83□□□□□ -1.48
LDB16YCL005W PLM2Q04383 521 aa5.83□□□□□ -1.48
LDB16YCL005W YDR514CQ04408 483 aa5.83□□□□□ -1.48
LDB16YCL005W YMR315WQ04869 349 aaKnown RBP5.83□□□□□ -1.48
LDB16YCL005W YPS7Q06325 596 aa5.83□□□□□ -1.48
LDB16YCL005W YPR127WQ06494 345 aa5.83□□□□□ -1.48
LDB16YCL005W NGL1Q08213 363 aaKnown RBP5.83□□□□□ -1.48
LDB16YCL005W RKM1Q08961 583 aaPredicted RBP5.83□□□□□ -1.48
LDB16YCL005W FMP40Q08968 688 aaPredicted RBP5.83□□□□□ -1.48
LDB16YCL005W YOR289WQ12012 251 aaPredicted RBP5.83□□□□□ -1.48
LDB16YCL005W ADE5,7P07244 802 aaKnown RBP5.82□□□□□ -1.48
LDB16YCL005W NFT1P0CE68 1218 aa5.82□□□□□ -1.48
LDB16YCL005W HOM3P10869 527 aa5.82□□□□□ -1.48
LDB16YCL005W CDC26P14724 124 aa5.82□□□□□ -1.48
LDB16YCL005W STP22P25604 385 aa5.82□□□□□ -1.48
LDB16YCL005W HSP30P25619 332 aa5.82□□□□□ -1.48
LDB16YCL005W PMT2P31382 759 aa5.82□□□□□ -1.48
LDB16YCL005W YEF1P32622 495 aa5.82□□□□□ -1.48
LDB16YCL005W RSM22P36056 628 aa5.82□□□□□ -1.48
LDB16YCL005W NSG1P38837 291 aa5.82□□□□□ -1.48
LDB16YCL005W YHR210CP38893 341 aa5.82□□□□□ -1.48
LDB16YCL005W HRB1P38922 454 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
LDB16YCL005W AIM20P40451 204 aa5.82□□□□□ -1.48
LDB16YCL005W PFS2P42841 465 aaKnown RBP5.82□□□□□ -1.48
LDB16YCL005W SPG5P42933 373 aa5.82□□□□□ -1.48
LDB16YCL005W DUG1P43616 481 aaKnown RBP5.82□□□□□ -1.48
LDB16YCL005W MDV1P47025 714 aa5.82□□□□□ -1.48
LDB16YCL005W YAE1P47118 141 aaPredicted RBP5.82□□□□□ -1.48
LDB16YCL005W IMD3P50095 523 aaKnown RBP5.82□□□□□ -1.48
LDB16YCL005W CWC23P52868 283 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms