RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	PTM1	P32857	523 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	CSE2	P33308	149 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	SGE1	P33335	543 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	YPT52	P36018	234 aa	Known RBP	3.1	□□□□□ -1.91
CMD1	YBR109C	TUL1	P36096	758 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	DRE2	P36152	348 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	RIB1	P38066	345 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	LDB7	P38210	180 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	ECM8	P38246	354 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	BMT2	P38278	337 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	IPT1	P38954	527 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	MNN9	P39107	395 aa	Known RBP	3.1	□□□□□ -1.91
CMD1	YBR109C	ISC1	P40015	477 aa	Known RBP	3.1	□□□□□ -1.91
CMD1	YBR109C	AVT6	P40074	448 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	BTT1	P40314	149 aa	Predicted RBP	3.1	□□□□□ -1.91
CMD1	YBR109C	PAC11	P40960	533 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	GAB1	P41733	394 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	SSU1	P41930	458 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	EFM3	P47163	339 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	ORM1	P53224	222 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	YNL260C	P53846	198 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	YMR010W	Q03687	405 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	YML108W	Q03759	105 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	YLR345W	Q06137	509 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	PHO92	Q06390	306 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	ARR1	Q06596	294 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	RRT8	Q08219	342 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	SLD7	Q08457	257 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	HSP42	Q12329	375 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	YDL199C	Q12407	687 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	YPL247C	Q12523	523 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	MES1	P00958	751 aa	Known RBP	3.09	□□□□□ -1.91
CMD1	YBR109C	PDE2	P06776	526 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	SPS4	P09937	338 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	GAL3	P13045	520 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	NOP1	P15646	327 aa	Known RBP	3.09	□□□□□ -1.91
CMD1	YBR109C	CDC23	P16522	626 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	DBF2	P22204	572 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	GIT1	P25346	518 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	RRP7	P25368	297 aa	Predicted RBP	3.09	□□□□□ -1.91
CMD1	YBR109C	YCR099C	P25657	155 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	IDH2	P28241	369 aa	Known RBP	3.09	□□□□□ -1.91
CMD1	YBR109C	NTG1	P31378	399 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	TRS65	P32893	560 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	GCS1	P35197	352 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	APE3	P37302	537 aa	Known RBP	3.09	□□□□□ -1.91
CMD1	YBR109C	HMT1	P38074	348 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	YBR063C	P38083	404 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	URA8	P38627	578 aa	Predicted RBP	3.09	□□□□□ -1.91
CMD1	YBR109C	ARN2	P38724	620 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	FHL1	P39521	936 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	SOP4	P39543	234 aa	Predicted RBP	3.09	□□□□□ -1.91
CMD1	YBR109C	VPS52	P39904	641 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	MMF1	P40185	145 aa	Known RBP	3.09	□□□□□ -1.91
CMD1	YBR109C	SWM2	P40342	146 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	YJL068C	P40363	299 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	YIL089W	P40500	205 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	UFE1	P41834	346 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	MEP2	P41948	499 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	YFR018C	P43599	363 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	HOC1	P47124	396 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	YNL140C	P53910	189 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	GOT1	Q03554	138 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	GAS3	Q03655	524 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	PLP1	Q04004	230 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	YDR124W	Q04608	324 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	RNH1	Q04740	348 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	ROY1	Q04847	553 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	YHC1	Q05900	231 aa	Known RBP	3.09	□□□□□ -1.91
CMD1	YBR109C	BNA5	Q05979	453 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	GRS2	Q06817	618 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	SYO1	Q07395	620 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	THP3	Q12049	470 aa	Known RBP	3.09	□□□□□ -1.91
CMD1	YBR109C	PKH2	Q12236	1081 aa	Known RBP	3.09	□□□□□ -1.91
CMD1	YBR109C	RRP42	Q12277	265 aa	Predicted RBP	3.09	□□□□□ -1.91
CMD1	YBR109C	YCL012C	Q8J0M4	134 aa		3.09	□□□□□ -1.91
CMD1	YBR109C	SPT3	P06844	337 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	AMD1	P15274	810 aa	Known RBP	3.08	□□□□□ -1.92
CMD1	YBR109C	GLK1	P17709	500 aa	Known RBP	3.08	□□□□□ -1.92
CMD1	YBR109C	ATP10	P18496	279 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	HIR2	P32480	875 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	SSO1	P32867	290 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	PRP18	P33411	251 aa	Predicted RBP	3.08	□□□□□ -1.92
CMD1	YBR109C	TIP20	P33891	701 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	YBR139W	P38109	508 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	THI2	P38141	450 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	RRP3	P38712	501 aa	Known RBP	3.08	□□□□□ -1.92
CMD1	YBR109C	VMA22	P38784	181 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	MTW1	P39731	289 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	POP1	P41812	875 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	SER2	P42941	309 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	PMT4	P46971	762 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	YGR168C	P53293	376 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	YNL143C	P53908	130 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	NUP49	Q02199	472 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	RNY1	Q02933	434 aa	Known RBP	3.08	□□□□□ -1.92
CMD1	YBR109C	ABZ2	Q03266	374 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	TDA1	Q03533	586 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	NUP53	Q03790	475 aa		3.08	□□□□□ -1.92
CMD1	YBR109C	RIF2	Q06208	395 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 105.4 ms