RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W RMD5Q12508 421 aa0.52□□□□□ -2.33
UTP20YBL004W CAM1P29547 415 aaKnown RBP0.52□□□□□ -2.33
UTP20YBL004W COQ2P32378 372 aa0.52□□□□□ -2.33
UTP20YBL004W IME2P32581 645 aa0.52□□□□□ -2.33
UTP20YBL004W LOS1P33418 1100 aaPredicted RBP0.52□□□□□ -2.33
UTP20YBL004W MRP21P38175 177 aa0.52□□□□□ -2.33
UTP20YBL004W RKM3P38222 552 aa0.52□□□□□ -2.33
UTP20YBL004W YMR244WQ04018 355 aa0.52□□□□□ -2.33
UTP20YBL004W YLR413WQ06689 675 aa0.52□□□□□ -2.33
UTP20YBL004W FRE6Q12473 712 aa0.52□□□□□ -2.33
UTP20YBL004W AVL9Q12500 764 aa0.52□□□□□ -2.33
UTP20YBL004W PET111P08468 800 aa0.51□□□□□ -2.33
UTP20YBL004W PRP19P32523 503 aaKnown RBP0.51□□□□□ -2.33
UTP20YBL004W RPN2P32565 945 aaKnown RBP0.51□□□□□ -2.33
UTP20YBL004W CPR5P35176 225 aa0.51□□□□□ -2.33
UTP20YBL004W URA8P38627 578 aaPredicted RBP0.51□□□□□ -2.33
UTP20YBL004W YJL193WP39542 402 aa0.51□□□□□ -2.33
UTP20YBL004W GET2P40056 285 aa0.51□□□□□ -2.33
UTP20YBL004W CDC40P40968 455 aaPredicted RBP0.51□□□□□ -2.33
UTP20YBL004W YAP6Q03935 383 aa0.51□□□□□ -2.33
UTP20YBL004W IZH3Q07959 543 aa0.51□□□□□ -2.33
UTP20YBL004W RPS21BQ3E754 87 aaKnown RBP0.51□□□□□ -2.33
UTP20YBL004W RPB8P20436 146 aa0.51□□□□□ -2.33
UTP20YBL004W MEI5P32489 222 aa0.51□□□□□ -2.33
UTP20YBL004W ARC40P38328 384 aaKnown RBP0.51□□□□□ -2.33
UTP20YBL004W ACO2P39533 789 aa0.51□□□□□ -2.33
UTP20YBL004W ATG16Q03818 150 aa0.51□□□□□ -2.33
UTP20YBL004W RSC58Q07979 502 aa0.51□□□□□ -2.33
UTP20YBL004W RFU1Q08003 200 aa0.51□□□□□ -2.33
UTP20YBL004W BBP1Q12365 385 aa0.51□□□□□ -2.33
UTP20YBL004W RPL11AP0C0W9 174 aaKnown RBP0.51□□□□□ -2.33
UTP20YBL004W RPL20AP0CX23 172 aaKnown RBP0.51□□□□□ -2.33
UTP20YBL004W RPL20BP0CX24 172 aaPredicted RBP0.51□□□□□ -2.33
UTP20YBL004W ATP12P22135 325 aa0.51□□□□□ -2.33
UTP20YBL004W CHA1P25379 360 aaKnown RBP0.51□□□□□ -2.33
UTP20YBL004W ERV1P27882 189 aa0.51□□□□□ -2.33
UTP20YBL004W MSG5P38590 489 aa0.51□□□□□ -2.33
UTP20YBL004W UTP25P40498 721 aaKnown RBP0.51□□□□□ -2.33
UTP20YBL004W MRPS18P42847 217 aa0.51□□□□□ -2.33
UTP20YBL004W FIP1P45976 327 aa0.51□□□□□ -2.33
UTP20YBL004W SNO1Q03144 224 aa0.51□□□□□ -2.33
UTP20YBL004W APC4Q04601 652 aa0.51□□□□□ -2.33
UTP20YBL004W AVO1Q08236 1176 aa0.51□□□□□ -2.33
UTP20YBL004W RPL11BQ3E757 174 aaPredicted RBP0.51□□□□□ -2.33
UTP20YBL004W CBP2P03874 630 aaPredicted RBP0.51□□□□□ -2.33
UTP20YBL004W BOS1P25385 244 aa0.51□□□□□ -2.33
UTP20YBL004W PHD1P36093 366 aa0.51□□□□□ -2.33
UTP20YBL004W GRE3P38715 327 aaKnown RBP RIP-Chip data0.51□□□□□ -2.33not detected
UTP20YBL004W RMD9P53140 646 aaKnown RBP0.51□□□□□ -2.33
UTP20YBL004W DLT1Q04216 342 aa0.51□□□□□ -2.33
UTP20YBL004W NDL1Q06568 189 aa0.51□□□□□ -2.33
UTP20YBL004W COQ10Q08058 207 aa0.51□□□□□ -2.33
UTP20YBL004W YPL162CQ12042 273 aa0.51□□□□□ -2.33
UTP20YBL004W MSH5Q12175 901 aa0.51□□□□□ -2.33
UTP20YBL004W LSO1Q3E827 93 aa0.51□□□□□ -2.33
UTP20YBL004W PRE4P30657 266 aa0.51□□□□□ -2.33
UTP20YBL004W SCS2P40075 244 aaKnown RBP0.51□□□□□ -2.33
UTP20YBL004W COG6P53959 839 aa0.51□□□□□ -2.33
UTP20YBL004W MIX14Q04341 121 aa0.51□□□□□ -2.33
UTP20YBL004W YLL056CQ12177 298 aa0.51□□□□□ -2.33
UTP20YBL004W HBN1Q96VH4 193 aa0.51□□□□□ -2.33
UTP20YBL004W IMA3P0CW40 589 aa0.5□□□□□ -2.33
UTP20YBL004W IMA4P0CW41 589 aa0.5□□□□□ -2.33
UTP20YBL004W YCK2P23292 546 aaKnown RBP0.5□□□□□ -2.33
UTP20YBL004W CDC12P32468 407 aaKnown RBP0.5□□□□□ -2.33
UTP20YBL004W RPS1AP33442 255 aaKnown RBP0.5□□□□□ -2.33
UTP20YBL004W STO1P34160 861 aaKnown RBP0.5□□□□□ -2.33
UTP20YBL004W GLG1P36143 616 aa0.5□□□□□ -2.33
UTP20YBL004W BAP2P38084 609 aa0.5□□□□□ -2.33
UTP20YBL004W HXT6P39003 570 aaKnown RBP0.5□□□□□ -2.33
UTP20YBL004W RRT13P40042 185 aa0.5□□□□□ -2.33
UTP20YBL004W CAK1P43568 368 aaPredicted RBP0.5□□□□□ -2.33
UTP20YBL004W IMA2Q08295 589 aa0.5□□□□□ -2.33
UTP20YBL004W FAP7Q12055 197 aaPredicted RBP0.5□□□□□ -2.33
UTP20YBL004W MES1P00958 751 aaKnown RBP0.5□□□□□ -2.33
UTP20YBL004W MDL1P33310 695 aa0.5□□□□□ -2.33
UTP20YBL004W YNL320WP42840 284 aa0.5□□□□□ -2.33
UTP20YBL004W YJR096WP47137 282 aa0.5□□□□□ -2.33
UTP20YBL004W GPG1P53130 126 aa0.5□□□□□ -2.33
UTP20YBL004W CRH1P53301 507 aa0.5□□□□□ -2.33
UTP20YBL004W YGR219WP53307 113 aa0.5□□□□□ -2.33
UTP20YBL004W FDH1Q08911 376 aa0.5□□□□□ -2.33
UTP20YBL004W YCL012CQ8J0M4 134 aa0.5□□□□□ -2.33
UTP20YBL004W SUI2P20459 304 aaKnown RBP0.5□□□□□ -2.33
UTP20YBL004W ECM10P39987 644 aa0.5□□□□□ -2.33
UTP20YBL004W PRM2P40534 656 aa0.5□□□□□ -2.33
UTP20YBL004W AGX1P43567 385 aa0.5□□□□□ -2.33
UTP20YBL004W ORM1P53224 222 aa0.5□□□□□ -2.33
UTP20YBL004W MPP6P53725 186 aaPredicted RBP0.5□□□□□ -2.33
UTP20YBL004W RKM2Q03942 479 aa0.5□□□□□ -2.33
UTP20YBL004W VPS13Q07878 3144 aa0.5□□□□□ -2.33
UTP20YBL004W SCEIP03882 235 aa0.5□□□□□ -2.33
UTP20YBL004W BUD5P25300 642 aaPredicted RBP0.5□□□□□ -2.33
UTP20YBL004W YIL054WP40524 105 aa0.5□□□□□ -2.33
UTP20YBL004W TAH11P47112 604 aa0.5□□□□□ -2.33
UTP20YBL004W RPL37BP51402 88 aaKnown RBP0.5□□□□□ -2.33
UTP20YBL004W RTC5Q12108 567 aaKnown RBP0.5□□□□□ -2.33
UTP20YBL004W MRPL22P53881 309 aa0.5□□□□□ -2.33
UTP20YBL004W SGF11Q03067 99 aa0.5□□□□□ -2.33
UTP20YBL004W HSP31Q04432 237 aa0.5□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms