RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 CSM1P25651 190 aa6.61□□□□□ -1.35
NME1NME1 PDC2P32896 925 aa6.61□□□□□ -1.35
NME1NME1 ECT1P33412 323 aa6.61□□□□□ -1.35
NME1NME1 YKL070WP36087 169 aa6.61□□□□□ -1.35
NME1NME1 SWD2P36104 329 aaPredicted RBP6.61□□□□□ -1.35
NME1NME1 KEL2P50090 882 aa6.61□□□□□ -1.35
NME1NME1 MMT2Q08970 484 aa6.61□□□□□ -1.35
NME1NME1 APC9Q12107 265 aa6.61□□□□□ -1.35
NME1NME1 IZH4Q99393 312 aa6.61□□□□□ -1.35
NME1NME1 MEK1P24719 497 aaPredicted RBP6.6□□□□□ -1.35
NME1NME1 MND1P53102 219 aa6.6□□□□□ -1.35
NME1NME1 TPS1Q00764 495 aaKnown RBP6.6□□□□□ -1.35
NME1NME1 MCH1Q07376 486 aa6.6□□□□□ -1.35
NME1NME1 UTP23Q12339 254 aaKnown RBP6.6□□□□□ -1.35
NME1NME1 MRPL27P36526 146 aaPredicted RBP6.59□□□□□ -1.35
NME1NME1 EFM1P38732 585 aa6.59□□□□□ -1.35
NME1NME1 PGU1P47180 361 aa6.59□□□□□ -1.35
NME1NME1 CBF5P33322 483 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
NME1NME1 HIT1P46973 164 aa6.58□□□□□ -1.36
NME1NME1 RPL21AQ02753 160 aaKnown RBP6.58□□□□□ -1.36
NME1NME1 ADD37Q03233 198 aa6.58□□□□□ -1.36
NME1NME1 RRP36Q12481 300 aaPredicted RBP6.58□□□□□ -1.36
NME1NME1 EPT1P22140 391 aa6.57□□□□□ -1.36
NME1NME1 ICL1P28240 557 aaPredicted RBP6.57□□□□□ -1.36
NME1NME1 CTM1P38818 585 aa6.57□□□□□ -1.36
NME1NME1 VEL1P53058 206 aa6.57□□□□□ -1.36
NME1NME1 SWC4P53201 476 aa6.57□□□□□ -1.36
NME1NME1 TPC1P53257 314 aa6.57□□□□□ -1.36
NME1NME1 RPL16BP26785 198 aaKnown RBP6.56□□□□□ -1.36
NME1NME1 SPS19P32573 292 aaKnown RBP6.56□□□□□ -1.36
NME1NME1 RCK1P38622 512 aa6.56□□□□□ -1.36
NME1NME1 SOP4P39543 234 aaPredicted RBP6.56□□□□□ -1.36
NME1NME1 ERP3Q12403 225 aa6.56□□□□□ -1.36
NME1NME1 CBP6P07253 162 aaPredicted RBP6.55□□□□□ -1.36
NME1NME1 SSA3P09435 649 aaKnown RBP6.55□□□□□ -1.36
NME1NME1 INO2P26798 304 aa6.55□□□□□ -1.36
NME1NME1 PRS1P32895 427 aaKnown RBP6.55□□□□□ -1.36
NME1NME1 HIS2P38635 335 aa6.55□□□□□ -1.36
NME1NME1 GGC1P38988 300 aa6.55□□□□□ -1.36
NME1NME1 RPN14P53196 417 aa6.55□□□□□ -1.36
NME1NME1 SED5Q01590 340 aa6.55□□□□□ -1.36
NME1NME1 FMP16Q12497 93 aa6.55□□□□□ -1.36
NME1NME1 EMC2P47133 292 aaKnown RBP6.54□□□□□ -1.36
NME1NME1 BER1Q06688 274 aaKnown RBP6.54□□□□□ -1.36
NME1NME1 INO80P53115 1489 aa6.53□□□□□ -1.36
NME1NME1 MCH2P36032 473 aa6.53□□□□□ -1.36
NME1NME1 TAE1P38340 232 aa6.53□□□□□ -1.36
NME1NME1 TDA11P38854 504 aa6.53□□□□□ -1.36
NME1NME1 API2Q04413 109 aa6.53□□□□□ -1.36
NME1NME1 YPL245WQ12179 454 aaKnown RBP6.53□□□□□ -1.36
NME1NME1 RPL31AP0C2H8 113 aaKnown RBP6.52□□□□□ -1.37
NME1NME1 MRPL20P22354 195 aaPredicted RBP6.52□□□□□ -1.37
NME1NME1 SMP1P38128 452 aa6.52□□□□□ -1.37
NME1NME1 ECM34P38728 170 aa6.52□□□□□ -1.37
NME1NME1 AGP3P43548 558 aa6.52□□□□□ -1.37
NME1NME1 YPL077CQ02831 240 aa6.52□□□□□ -1.37
NME1NME1 PET8P38921 284 aa6.51□□□□□ -1.37
NME1NME1 SDS23P53172 527 aa6.51□□□□□ -1.37
NME1NME1 RRP42Q12277 265 aaPredicted RBP6.51□□□□□ -1.37
NME1NME1 ATP6P00854 259 aa6.5□□□□□ -1.37
NME1NME1 HPR1P17629 752 aaKnown RBP6.5□□□□□ -1.37
NME1NME1 TIP20P33891 701 aa6.5□□□□□ -1.37
NME1NME1 YKL187CP34231 750 aa6.5□□□□□ -1.37
NME1NME1 GPN3Q06543 272 aa6.5□□□□□ -1.37
NME1NME1 ASR1Q06834 288 aa6.5□□□□□ -1.37
NME1NME1 PRP46Q12417 451 aaPredicted RBP6.5□□□□□ -1.37
NME1NME1 BI3Q9ZZW7 517 aa6.5□□□□□ -1.37
NME1NME1 ADH1P00330 348 aaKnown RBP6.49□□□□□ -1.37
NME1NME1 YKL063CP35725 167 aa6.49□□□□□ -1.37
NME1NME1 MRP21P38175 177 aa6.49□□□□□ -1.37
NME1NME1 RRT13P40042 185 aa6.49□□□□□ -1.37
NME1NME1 SLM1P40485 686 aa6.49□□□□□ -1.37
NME1NME1 YGR018CP53211 109 aa6.49□□□□□ -1.37
NME1NME1 LAP3Q01532 483 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
NME1NME1 VHS1Q03785 461 aa6.49□□□□□ -1.37
NME1NME1 TFC7Q12415 435 aa6.49□□□□□ -1.37
NME1NME1 MRPL37P36532 105 aa6.48□□□□□ -1.37
NME1NME1 UBC13P52490 153 aa6.48□□□□□ -1.37
NME1NME1 YLR446WQ06204 433 aa6.48□□□□□ -1.37
NME1NME1 MIM1Q08176 113 aa6.48□□□□□ -1.37
NME1NME1 TDH3P00359 332 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
NME1NME1 FRS2P15625 503 aaKnown RBP6.47□□□□□ -1.37
NME1NME1 RPC37P36121 282 aa6.47□□□□□ -1.37
NME1NME1 YPC1P38298 316 aa6.47□□□□□ -1.37
NME1NME1 YIA6P40556 373 aa6.47□□□□□ -1.37
NME1NME1 GDS1P41913 522 aa6.47□□□□□ -1.37
NME1NME1 INP2Q03824 705 aa6.47□□□□□ -1.37
NME1NME1 YDR018CQ12185 396 aa6.47□□□□□ -1.37
NME1NME1 RAX2Q12465 1220 aa6.47□□□□□ -1.37
NME1NME1 YPR064WQ12492 139 aa6.47□□□□□ -1.37
NME1NME1 LAG2Q92325 660 aa6.47□□□□□ -1.37
NME1NME1 SOD1P00445 154 aaKnown RBP6.46□□□□□ -1.38
NME1NME1 IFM1P25038 676 aa6.46□□□□□ -1.38
NME1NME1 CYM1P32898 989 aa6.46□□□□□ -1.38
NME1NME1 MRPS9P38120 278 aa6.46□□□□□ -1.38
NME1NME1 MRX5P47007 382 aa6.46□□□□□ -1.38
NME1NME1 YNR066CP53752 436 aa6.46□□□□□ -1.38
NME1NME1 CSI1Q04368 295 aa6.46□□□□□ -1.38
NME1NME1 YOL029CQ08187 201 aa6.46□□□□□ -1.38
NME1NME1 RFT1P38206 574 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms