RNA–Protein interactions for RNA: ENST00000593959.1

SYMPK-204, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-204ENST00000593959 C11orf16Q9NQ32 467 aa18.4■□□□□ 0.54
SYMPK-204ENST00000593959 AGPAT5Q9NUQ2 364 aa18.4■□□□□ 0.54
SYMPK-204ENST00000593959 CD207Q9UJ71 328 aa18.4■□□□□ 0.54
SYMPK-204ENST00000593959 MARCH6O60337 910 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 COL9A1P20849 921 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 RAB27AP51159 221 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 POU5F1BQ06416 359 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 TRIM29Q14134 588 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 CTTNQ14247 550 aaKnown RBP18.39■□□□□ 0.53
SYMPK-204ENST00000593959 DUSP6Q16828 381 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 EP400NLQ6ZTU2 488 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 MRPL10Q7Z7H8 261 aaKnown RBP18.39■□□□□ 0.53
SYMPK-204ENST00000593959 FERMT3Q86UX7 667 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 SLC39A11Q8N1S5 342 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 SMRP1Q8NCR6 262 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 HELQQ8TDG4 1101 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 TMEM143Q96AN5 459 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 NLRP4Q96MN2 994 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 ZNF558Q96NG5 402 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 MRPL9Q9BYD2 267 aaKnown RBP18.39■□□□□ 0.53
SYMPK-204ENST00000593959 TLE6Q9H808 572 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 MINDY3Q9H8M7 445 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 NGRNQ9NPE2 291 aaKnown RBP18.39■□□□□ 0.53
SYMPK-204ENST00000593959 XPNPEP1Q9NQW7 623 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 ANKEF1Q9NU02 776 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 FAM105AQ9NUU6 356 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 SPG21Q9NZD8 308 aa18.39■□□□□ 0.53
SYMPK-204ENST00000593959 NEMFO60524 1076 aa18.38■□□□□ 0.53
SYMPK-204ENST00000593959 XRCC6P12956 609 aaKnown RBP eCLIP18.38■□□□□ 0.53
SYMPK-204ENST00000593959 CYP4A11Q02928 519 aa18.38■□□□□ 0.53
SYMPK-204ENST00000593959 EMC2Q15006 297 aa18.38■□□□□ 0.53
SYMPK-204ENST00000593959 PCBP1Q15365 356 aaKnown RBP eCLIP18.38■□□□□ 0.53
SYMPK-204ENST00000593959 XKR9Q5GH70 373 aa18.38■□□□□ 0.53
SYMPK-204ENST00000593959 CATSPER4Q7RTX7 472 aa18.38■□□□□ 0.53
SYMPK-204ENST00000593959 IFNLR1Q8IU57 520 aaPredicted RBP18.38■□□□□ 0.53
SYMPK-204ENST00000593959 TPH2Q8IWU9 490 aa18.38■□□□□ 0.53
SYMPK-204ENST00000593959 VN1R2Q8NFZ6 395 aa18.38■□□□□ 0.53
SYMPK-204ENST00000593959 TCP11Q8WWU5 503 aa18.38■□□□□ 0.53
SYMPK-204ENST00000593959 PUF60Q9UHX1 559 aaKnown RBP18.38■□□□□ 0.53
SYMPK-204ENST00000593959 PIN4Q9Y237 131 aaKnown RBP18.38■□□□□ 0.53
SYMPK-204ENST00000593959 CARNS1A5YM72 827 aa18.37■□□□□ 0.53
SYMPK-204ENST00000593959 ORC2Q13416 577 aaPredicted RBP18.37■□□□□ 0.53
SYMPK-204ENST00000593959 MXD4Q14582 209 aaPredicted RBP18.37■□□□□ 0.53
SYMPK-204ENST00000593959 TWF2Q6IBS0 349 aaKnown RBP18.37■□□□□ 0.53
SYMPK-204ENST00000593959 RBM23Q86U06 439 aaKnown RBP18.37■□□□□ 0.53
SYMPK-204ENST00000593959 RNF169Q8NCN4 708 aa18.37■□□□□ 0.53
SYMPK-204ENST00000593959 FBXO18Q8NFZ0 1043 aa18.37■□□□□ 0.53
SYMPK-204ENST00000593959 MICAL1Q8TDZ2 1067 aa18.37■□□□□ 0.53
SYMPK-204ENST00000593959 ZSCAN31Q96LW9 406 aaPredicted RBP18.37■□□□□ 0.53
SYMPK-204ENST00000593959 LRFN3Q9BTN0 628 aa18.37■□□□□ 0.53
SYMPK-204ENST00000593959 TMEM60Q9H2L4 133 aa18.37■□□□□ 0.53
SYMPK-204ENST00000593959 FOXP1Q9H334 677 aaPredicted RBP18.37■□□□□ 0.53
SYMPK-204ENST00000593959 MEIS3P2A8K0S8 358 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 K7ELQ4 463 aaPredicted RBP18.36■□□□□ 0.53
SYMPK-204ENST00000593959 OFD1O75665 1012 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 CSPG5O95196 566 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 SRGAP2CP0DJJ0 459 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 SPATA31C1P0DKV0 1188 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 ARL2P36404 184 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 PBX3P40426 434 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 TXKP42681 527 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 NDUFV1P49821 464 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 PTENP60484 403 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 KRT17Q04695 432 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 CLUL1Q15846 466 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 UBXN11Q5T124 520 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 NFKBIZQ9BYH8 718 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 PCDHB2Q9Y5E7 798 aa18.36■□□□□ 0.53
SYMPK-204ENST00000593959 HIDE1A8MVS5 230 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 PER2O15055 1255 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 DGAT1O75907 488 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 HSP90AA1P07900 732 aaKnown RBP18.35■□□□□ 0.53
SYMPK-204ENST00000593959 ALADP13716 330 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 SSTR3P32745 418 aaPredicted RBP18.35■□□□□ 0.53
SYMPK-204ENST00000593959 ALDH7A1P49419 539 aaKnown RBP18.35■□□□□ 0.53
SYMPK-204ENST00000593959 RARRES1P49788 294 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 BCAR1P56945 870 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 SAFBQ15424 915 aaKnown RBP eCLIP18.35■□□□□ 0.53
SYMPK-204ENST00000593959 NOMO2Q5JPE7 1267 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 TMEM31Q5JXX7 168 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 GLB1LQ6UWU2 654 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 AGMOQ6ZNB7 445 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 CCDC83Q8IWF9 413 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 MRPL43Q8N983 215 aaKnown RBP18.35■□□□□ 0.53
SYMPK-204ENST00000593959 RNF149Q8NC42 400 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 SUSD6Q92537 303 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 LPPQ93052 612 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 C8orf76Q96K31 380 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 POP1Q99575 1024 aaKnown RBP18.35■□□□□ 0.53
SYMPK-204ENST00000593959 MTRQ99707 1265 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 TCF25Q9BQ70 676 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 SH2B1Q9NRF2 756 aaPredicted RBP18.35■□□□□ 0.53
SYMPK-204ENST00000593959 TBC1D13Q9NVG8 400 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 BARX2Q9UMQ3 279 aaPredicted RBP18.35■□□□□ 0.53
SYMPK-204ENST00000593959 IRAK3Q9Y616 596 aa18.35■□□□□ 0.53
SYMPK-204ENST00000593959 INPPL1O15357 1258 aa18.34■□□□□ 0.53
SYMPK-204ENST00000593959 HMGN5P82970 282 aaKnown RBP18.34■□□□□ 0.53
SYMPK-204ENST00000593959 CBX2Q14781 532 aaPredicted RBP18.34■□□□□ 0.53
SYMPK-204ENST00000593959 PGBD4Q96DM1 585 aa18.34■□□□□ 0.53
SYMPK-204ENST00000593959 ARIH1Q9Y4X5 557 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms