RNA–Protein interactions for RNA: ENST00000593959.1

SYMPK-204, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-204ENST00000593959 NISCHQ9Y2I1 1504 aa41.04■■■■■ 4.16
SYMPK-204ENST00000593959 CCDC180Q9P1Z9 1646 aa36.67■■■■□ 3.46
SYMPK-204ENST00000593959 ABCC9O60706 1549 aa36.34■■■■□ 3.41
SYMPK-204ENST00000593959 RB1CC1Q8TDY2 1594 aa34.76■■■■□ 3.16
SYMPK-204ENST00000593959 NACADO15069 1562 aa34.65■■■■□ 3.14
SYMPK-204ENST00000593959 MYO15BQ96JP2 1530 aa34.37■■■■□ 3.09
SYMPK-204ENST00000593959 DCAF8L2P0C7V8 631 aa34.35■■■■□ 3.09
SYMPK-204ENST00000593959 ZCCHC6Q5VYS8 1495 aaKnown RBP34.07■■■■□ 3.05
SYMPK-204ENST00000593959 DCAF1Q9Y4B6 1507 aa34■■■■□ 3.03
SYMPK-204ENST00000593959 DNAJC5BQ9UF47 199 aa33.96■■■■□ 3.03
SYMPK-204ENST00000593959 UNC13AQ9UPW8 1703 aa33.91■■■■□ 3.02
SYMPK-204ENST00000593959 PABPN1Q86U42 306 aaKnown RBP eCLIP33.9■■■■□ 3.02
SYMPK-204ENST00000593959 BICRAQ9NZM4 1560 aa33.8■■■■□ 3
SYMPK-204ENST00000593959 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
SYMPK-204ENST00000593959 SCRIBQ14160 1630 aa33.33■■■□□ 2.93
SYMPK-204ENST00000593959 EIF4G1Q04637 1599 aaKnown RBP32.91■■■□□ 2.86
SYMPK-204ENST00000593959 CC2D2AQ9P2K1 1620 aa32.87■■■□□ 2.85
SYMPK-204ENST00000593959 CECR2Q9BXF3 1484 aa32.76■■■□□ 2.84
SYMPK-204ENST00000593959 NCAPD3P42695 1498 aa32.04■■■□□ 2.72
SYMPK-204ENST00000593959 ATAD2BQ9ULI0 1458 aa31.93■■■□□ 2.7
SYMPK-204ENST00000593959 SMARCA4P51532 1647 aa31.91■■■□□ 2.7
SYMPK-204ENST00000593959 SMARCA2P51531 1590 aa31.82■■■□□ 2.68
SYMPK-204ENST00000593959 BAZ1AQ9NRL2 1556 aaPredicted RBP31.81■■■□□ 2.68
SYMPK-204ENST00000593959 HMGXB3Q12766 1538 aa31.77■■■□□ 2.68
SYMPK-204ENST00000593959 PEG3Q9GZU2 1588 aa31.7■■■□□ 2.67
SYMPK-204ENST00000593959 MROH2BQ7Z745 1585 aa31.6■■■□□ 2.65
SYMPK-204ENST00000593959 BAZ1BQ9UIG0 1483 aaKnown RBP31.58■■■□□ 2.65
SYMPK-204ENST00000593959 ERCC6Q03468 1493 aa31.33■■■□□ 2.61
SYMPK-204ENST00000593959 NESP48681 1621 aa31.32■■■□□ 2.6
SYMPK-204ENST00000593959 CUX2O14529 1486 aa31.3■■■□□ 2.6
SYMPK-204ENST00000593959 LAMC3Q9Y6N6 1575 aa31.19■■■□□ 2.58
SYMPK-204ENST00000593959 WIZO95785 1651 aa31.16■■■□□ 2.58
SYMPK-204ENST00000593959 RSF1Q96T23 1441 aaPredicted RBP31.09■■■□□ 2.57
SYMPK-204ENST00000593959 CADPSQ9ULU8 1353 aa31.04■■■□□ 2.56
SYMPK-204ENST00000593959 PDS5BQ9NTI5 1447 aa31.01■■■□□ 2.55
SYMPK-204ENST00000593959 DNAJC5Q9H3Z4 198 aa31■■■□□ 2.55
SYMPK-204ENST00000593959 THOC2Q8NI27 1593 aaKnown RBP30.96■■■□□ 2.55
SYMPK-204ENST00000593959 KIF21AQ7Z4S6 1674 aa30.87■■■□□ 2.53
SYMPK-204ENST00000593959 TOP2AP11388 1531 aaKnown RBP30.85■■■□□ 2.53
SYMPK-204ENST00000593959 CFTRP13569 1480 aa30.76■■■□□ 2.52
SYMPK-204ENST00000593959 MRC2Q9UBG0 1479 aa30.7■■■□□ 2.51
SYMPK-204ENST00000593959 WDR62O43379 1518 aa30.65■■■□□ 2.5
SYMPK-204ENST00000593959 FANCD2Q9BXW9 1451 aa30.63■■■□□ 2.49
SYMPK-204ENST00000593959 CEP164Q9UPV0 1460 aa30.62■■■□□ 2.49
SYMPK-204ENST00000593959 CCDC88BA6NC98 1476 aa30.52■■■□□ 2.48
SYMPK-204ENST00000593959 URB2Q14146 1524 aaKnown RBP30.37■■■□□ 2.45
SYMPK-204ENST00000593959 PRDM2Q13029 1718 aa30.32■■■□□ 2.44
SYMPK-204ENST00000593959 ABCC8Q09428 1581 aa30.09■■■□□ 2.41
SYMPK-204ENST00000593959 TOPBP1Q92547 1522 aa30.09■■■□□ 2.41
SYMPK-204ENST00000593959 IFT140Q96RY7 1462 aa30.04■■■□□ 2.4
SYMPK-204ENST00000593959 DNMBPQ6XZF7 1577 aa29.99■■■□□ 2.39
SYMPK-204ENST00000593959 ZNF608Q9ULD9 1512 aaPredicted RBP29.94■■■□□ 2.38
SYMPK-204ENST00000593959 OSCARQ8IYS5 282 aa29.91■■■□□ 2.38
SYMPK-204ENST00000593959 TARBP1Q13395 1621 aaKnown RBP29.82■■■□□ 2.36
SYMPK-204ENST00000593959 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
SYMPK-204ENST00000593959 SUPT5HO00267 1087 aaKnown RBP29.76■■■□□ 2.35
SYMPK-204ENST00000593959 EIF4G3O43432 1585 aaKnown RBP29.74■■■□□ 2.35
SYMPK-204ENST00000593959 AQRO60306 1485 aaKnown RBP eCLIP29.7■■■□□ 2.352e-11■■■■■ 48.3
SYMPK-204ENST00000593959 CUX1P39880 1505 aa29.67■■■□□ 2.34
SYMPK-204ENST00000593959 SOGA1O94964 1423 aa29.67■■■□□ 2.34
SYMPK-204ENST00000593959 RAD54L2Q9Y4B4 1467 aa29.66■■■□□ 2.34
SYMPK-204ENST00000593959 FGD5Q6ZNL6 1462 aa29.63■■■□□ 2.33
SYMPK-204ENST00000593959 TRIM41Q8WV44 630 aa29.57■■■□□ 2.32
SYMPK-204ENST00000593959 WDR97A6NE52 1622 aa29.56■■■□□ 2.32
SYMPK-204ENST00000593959 TDRD9Q8NDG6 1382 aaKnown RBP29.56■■■□□ 2.32
SYMPK-204ENST00000593959 CHD1O14646 1710 aa29.42■■■□□ 2.3
SYMPK-204ENST00000593959 RIMBP3CA6NJZ7 1639 aa29.42■■■□□ 2.3
SYMPK-204ENST00000593959 RIMBP3BA6NNM3 1639 aa29.42■■■□□ 2.3
SYMPK-204ENST00000593959 RIMBP3Q9UFD9 1639 aa29.42■■■□□ 2.3
SYMPK-204ENST00000593959 GRIN2BQ13224 1484 aa29.39■■■□□ 2.3
SYMPK-204ENST00000593959 ARHGEF11O15085 1522 aa29.39■■■□□ 2.3
SYMPK-204ENST00000593959 SNAPC4Q5SXM2 1469 aa29.38■■■□□ 2.29
SYMPK-204ENST00000593959 MAGI1Q96QZ7 1491 aaPredicted RBP29.37■■■□□ 2.29
SYMPK-204ENST00000593959 ABCA10Q8WWZ4 1543 aa29.36■■■□□ 2.29
SYMPK-204ENST00000593959 FBLN2P98095 1184 aa29.36■■■□□ 2.29
SYMPK-204ENST00000593959 GAPVD1Q14C86 1478 aa29.31■■■□□ 2.28
SYMPK-204ENST00000593959 WRNQ14191 1432 aaPredicted RBP eCLIP29.28■■■□□ 2.28
SYMPK-204ENST00000593959 TOP2BQ02880 1626 aa29.27■■■□□ 2.28
SYMPK-204ENST00000593959 SYNJ2O15056 1496 aa29.27■■■□□ 2.28
SYMPK-204ENST00000593959 CHMP7Q8WUX9 453 aaPredicted RBP29.26■■■□□ 2.27
SYMPK-204ENST00000593959 ABCA5Q8WWZ7 1642 aa29.26■■■□□ 2.27
SYMPK-204ENST00000593959 BIVM-ERCC5R4GMW8 1640 aa29.25■■■□□ 2.27
SYMPK-204ENST00000593959 CLASP1Q7Z460 1538 aa29.21■■■□□ 2.27
SYMPK-204ENST00000593959 SYNJ1O43426 1573 aa29.21■■■□□ 2.27
SYMPK-204ENST00000593959 PBRM1Q86U86 1689 aa29.18■■■□□ 2.26
SYMPK-204ENST00000593959 ARAP1Q96P48 1450 aa29.13■■■□□ 2.25
SYMPK-204ENST00000593959 CYB5RLQ6IPT4 315 aa29.13■■■□□ 2.25
SYMPK-204ENST00000593959 GRIN2AQ12879 1464 aa29■■■□□ 2.23
SYMPK-204ENST00000593959 ERICH3Q5RHP9 1530 aa28.99■■■□□ 2.23
SYMPK-204ENST00000593959 ADAMTS12P58397 1594 aa28.99■■■□□ 2.23
SYMPK-204ENST00000593959 FHAD1B1AJZ9 1412 aa28.98■■■□□ 2.23
SYMPK-204ENST00000593959 NUP160Q12769 1436 aa28.95■■■□□ 2.23
SYMPK-204ENST00000593959 CEP170Q5SW79 1584 aa28.86■■■□□ 2.21
SYMPK-204ENST00000593959 SHROOM2Q13796 1616 aa28.76■■■□□ 2.19
SYMPK-204ENST00000593959 IGF1RP08069 1367 aa28.73■■■□□ 2.19
SYMPK-204ENST00000593959 ERCC6L2Q5T890 1561 aa28.72■■■□□ 2.19
SYMPK-204ENST00000593959 KIF27Q86VH2 1401 aa28.71■■■□□ 2.19
SYMPK-204ENST00000593959 TRHP20396 242 aaPredicted RBP28.64■■■□□ 2.18
SYMPK-204ENST00000593959 JPH4Q96JJ6 628 aa28.62■■■□□ 2.17
SYMPK-204ENST00000593959 PRG4Q92954 1404 aaPredicted RBP28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms