RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 A0A0A6YYK5 440 aaPredicted RBP6.49□□□□□ -1.37
LINC01088-205ENST00000509088 ZFP36P26651 326 aaKnown RBP6.49□□□□□ -1.37
LINC01088-205ENST00000509088 EPHA7Q15375 998 aa6.49□□□□□ -1.37
LINC01088-205ENST00000509088 RABL3Q5HYI8 236 aa6.49□□□□□ -1.37
LINC01088-205ENST00000509088 PRAMEF9Q5VWM5 478 aa6.49□□□□□ -1.37
LINC01088-205ENST00000509088 LAIR1Q6GTX8 287 aa6.49□□□□□ -1.37
LINC01088-205ENST00000509088 DDX53Q86TM3 631 aaKnown RBP6.49□□□□□ -1.37
LINC01088-205ENST00000509088 KIAA1958Q8N8K9 716 aa6.49□□□□□ -1.37
LINC01088-205ENST00000509088 MDGA1Q8NFP4 955 aa6.49□□□□□ -1.37
LINC01088-205ENST00000509088 LENG9Q96B70 501 aa6.49□□□□□ -1.37
LINC01088-205ENST00000509088 ZNF512Q96ME7 567 aaPredicted RBP6.49□□□□□ -1.37
LINC01088-205ENST00000509088 SOX7Q9BT81 388 aa6.49□□□□□ -1.37
LINC01088-205ENST00000509088 MLST8Q9BVC4 326 aa6.49□□□□□ -1.37
LINC01088-205ENST00000509088 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.49□□□□□ -1.37
LINC01088-205ENST00000509088 PTPDC1A2A3K4 754 aa6.48□□□□□ -1.37
LINC01088-205ENST00000509088 APPP05067 770 aa6.48□□□□□ -1.37
LINC01088-205ENST00000509088 ADRA1BP35368 520 aa6.48□□□□□ -1.37
LINC01088-205ENST00000509088 PTTG1IPP53801 180 aa6.48□□□□□ -1.37
LINC01088-205ENST00000509088 GYS2P54840 703 aa6.48□□□□□ -1.37
LINC01088-205ENST00000509088 SMAD3P84022 425 aaKnown RBP6.48□□□□□ -1.37
LINC01088-205ENST00000509088 TCEA2Q15560 299 aa6.48□□□□□ -1.37
LINC01088-205ENST00000509088 DALRD3Q5D0E6 543 aaKnown RBP6.48□□□□□ -1.37
LINC01088-205ENST00000509088 NAIF1Q69YI7 327 aaPredicted RBP6.48□□□□□ -1.37
LINC01088-205ENST00000509088 GSPT2Q8IYD1 628 aaKnown RBP6.48□□□□□ -1.37
LINC01088-205ENST00000509088 MB21D1Q8N884 522 aa6.48□□□□□ -1.37
LINC01088-205ENST00000509088 SLC25A43Q8WUT9 341 aaPredicted RBP6.48□□□□□ -1.37
LINC01088-205ENST00000509088 ATXN2LQ8WWM7 1075 aaKnown RBP6.48□□□□□ -1.37
LINC01088-205ENST00000509088 PGBD4Q96DM1 585 aa6.48□□□□□ -1.37
LINC01088-205ENST00000509088 CCDC136Q96JN2 1154 aa6.48□□□□□ -1.37
LINC01088-205ENST00000509088 TNPO3Q9Y5L0 923 aaKnown RBP6.48□□□□□ -1.37
LINC01088-205ENST00000509088 WRNQ14191 1432 aaPredicted RBP eCLIP6.48□□□□□ -1.37
LINC01088-205ENST00000509088 A0A0A6YYJ9 748 aa6.47□□□□□ -1.37
LINC01088-205ENST00000509088 GOLGA8BA8MQT2 603 aa6.47□□□□□ -1.37
LINC01088-205ENST00000509088 JUNP05412 331 aaKnown RBP6.47□□□□□ -1.37
LINC01088-205ENST00000509088 IGFALSP35858 605 aa6.47□□□□□ -1.37
LINC01088-205ENST00000509088 MBNL2Q5VZF2 373 aaKnown RBP6.47□□□□□ -1.37
LINC01088-205ENST00000509088 UNQ6494/PRO21346Q6UXR6 183 aa6.47□□□□□ -1.37
LINC01088-205ENST00000509088 VRK3Q8IV63 474 aa6.47□□□□□ -1.37
LINC01088-205ENST00000509088 GPR150Q8NGU9 434 aa6.47□□□□□ -1.37
LINC01088-205ENST00000509088 TUBGCP5Q96RT8 1024 aa6.47□□□□□ -1.37
LINC01088-205ENST00000509088 CRAMP1Q96RY5 1269 aa6.47□□□□□ -1.37
LINC01088-205ENST00000509088 ELF4Q99607 663 aaPredicted RBP6.47□□□□□ -1.37
LINC01088-205ENST00000509088 FEZ1Q99689 392 aa6.47□□□□□ -1.37
LINC01088-205ENST00000509088 ENKD1Q9H0I2 346 aa6.47□□□□□ -1.37
LINC01088-205ENST00000509088 NOP58Q9Y2X3 529 aaKnown RBP6.47□□□□□ -1.37
LINC01088-205ENST00000509088 HS3ST4Q9Y661 456 aa6.47□□□□□ -1.37
LINC01088-205ENST00000509088 CBX4O00257 560 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 MTSS1O43312 755 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 CFBP00751 764 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 ASLP04424 464 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 CYP17A1P05093 508 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 SLC9A1P19634 815 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 SDSP20132 328 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 PTGS2P35354 604 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 KIR2DL3P43628 341 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 FSTL1Q12841 308 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 PABPC4Q13310 644 aaKnown RBP eCLIP6.46□□□□□ -1.382e-7■□□□□ 10.4
LINC01088-205ENST00000509088 SPIDRQ14159 915 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 CXorf67Q86X51 503 aaPredicted RBP6.46□□□□□ -1.38
LINC01088-205ENST00000509088 CMTM4Q8IZR5 234 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 ZNF276Q8N554 614 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 HAS1Q92839 578 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 MTG2Q9H4K7 406 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 PCIF1Q9H4Z3 704 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 B4GALT6Q9UBX8 382 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 RCAN3Q9UKA8 241 aa6.46□□□□□ -1.38
LINC01088-205ENST00000509088 GRID2IPA4D2P6 1211 aa6.45□□□□□ -1.38
LINC01088-205ENST00000509088 TMEM191CA6NGB0 347 aa6.45□□□□□ -1.38
LINC01088-205ENST00000509088 BCAR1P56945 870 aa6.45□□□□□ -1.38
LINC01088-205ENST00000509088 FNDC3BQ53EP0 1204 aaKnown RBP6.45□□□□□ -1.38
LINC01088-205ENST00000509088 KRT40Q6A162 431 aa6.45□□□□□ -1.38
LINC01088-205ENST00000509088 MFSD5Q6N075 450 aa6.45□□□□□ -1.38
LINC01088-205ENST00000509088 DHX37Q8IY37 1157 aaKnown RBP6.45□□□□□ -1.38
LINC01088-205ENST00000509088 C14orf93Q9H972 538 aaKnown RBP6.45□□□□□ -1.38
LINC01088-205ENST00000509088 TNFRSF18Q9Y5U5 241 aa6.45□□□□□ -1.38
LINC01088-205ENST00000509088 WASHC2CQ9Y4E1 1318 aa6.45□□□□□ -1.38
LINC01088-205ENST00000509088 B4E1Z4 1266 aa6.44□□□□□ -1.38
LINC01088-205ENST00000509088 H7C1D1 291 aa6.44□□□□□ -1.38
LINC01088-205ENST00000509088 RRP9O43818 475 aaKnown RBP6.44□□□□□ -1.38
LINC01088-205ENST00000509088 OPHN1O60890 802 aa6.44□□□□□ -1.38
LINC01088-205ENST00000509088 RFPL3O75679 317 aa6.44□□□□□ -1.38
LINC01088-205ENST00000509088 FAM214AQ32MH5 1076 aa6.44□□□□□ -1.38
LINC01088-205ENST00000509088 SYNPOQ8N3V7 929 aa6.44□□□□□ -1.38
LINC01088-205ENST00000509088 PPP1R14CQ8TAE6 165 aa6.44□□□□□ -1.38
LINC01088-205ENST00000509088 MYL10Q9BUA6 226 aa6.44□□□□□ -1.38
LINC01088-205ENST00000509088 FZD1Q9UP38 647 aa6.44□□□□□ -1.38
LINC01088-205ENST00000509088 WASHC2AQ641Q2 1341 aa6.44□□□□□ -1.38
LINC01088-205ENST00000509088 FAM83GA6ND36 823 aa6.43□□□□□ -1.38
LINC01088-205ENST00000509088 GOLGA6L6A8MZA4 724 aa6.43□□□□□ -1.38
LINC01088-205ENST00000509088 PRPF6O94906 941 aaKnown RBP6.43□□□□□ -1.38
LINC01088-205ENST00000509088 GCP02774 474 aa6.43□□□□□ -1.38
LINC01088-205ENST00000509088 BMP5P22003 454 aa6.43□□□□□ -1.38
LINC01088-205ENST00000509088 DCAF17Q5H9S7 520 aaPredicted RBP6.43□□□□□ -1.38
LINC01088-205ENST00000509088 PIK3R6Q5UE93 754 aa6.43□□□□□ -1.38
LINC01088-205ENST00000509088 NME9Q86XW9 330 aa6.43□□□□□ -1.38
LINC01088-205ENST00000509088 PIK3C3Q8NEB9 887 aa6.43□□□□□ -1.38
LINC01088-205ENST00000509088 ST8SIA2Q92186 375 aa6.43□□□□□ -1.38
LINC01088-205ENST00000509088 RPGRQ92834 1020 aaKnown RBP6.43□□□□□ -1.38
LINC01088-205ENST00000509088 NINJ1Q92982 152 aa6.43□□□□□ -1.38
LINC01088-205ENST00000509088 OSBPL6Q9BZF3 934 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms