RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 KLHL11Q9NVR0 708 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 OGFRQ9NZT2 677 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 PACSIN3Q9UKS6 424 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 PTCH2Q9Y6C5 1203 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 PALM3A6NDB9 673 aaPredicted RBP6.22□□□□□ -1.41
CD47-201ENST00000355354 GOLGA6L4A6NEF3 574 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 GABBR2O75899 941 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 RGS20O76081 388 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 SHMT1P34896 483 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 MAPK7Q13164 816 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 RTN1Q16799 776 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 PPP6R3Q5H9R7 873 aaPredicted RBP6.22□□□□□ -1.41
CD47-201ENST00000355354 RRAGAQ7L523 313 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 LMO3Q8TAP4 145 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 LNX1Q8TBB1 728 aaPredicted RBP6.22□□□□□ -1.41
CD47-201ENST00000355354 ENOX1Q8TC92 643 aaKnown RBP6.22□□□□□ -1.41
CD47-201ENST00000355354 STAG1Q8WVM7 1258 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 FAM151AQ8WW52 585 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 MMRN2Q9H8L6 949 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 HPCAL4Q9UM19 191 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 EPN1Q9Y6I3 576 aaPredicted RBP6.22□□□□□ -1.41
CD47-201ENST00000355354 ASAP2O43150 1006 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 SSBP05455 408 aaKnown RBP eCLIP6.22□□□□□ -1.41
CD47-201ENST00000355354 COPB1P53618 953 aaKnown RBP6.22□□□□□ -1.41
CD47-201ENST00000355354 PPP4CP60510 307 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 SREBF2Q12772 1141 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 PLS1Q14651 629 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 TMEM192Q8IY95 271 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 ANKRD13AQ8IZ07 590 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 BMPERQ8N8U9 685 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 CASKIN2Q8WXE0 1202 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 ANP32BQ92688 251 aaKnown RBP6.22□□□□□ -1.41
CD47-201ENST00000355354 MTMR9Q96QG7 549 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 ISY1Q9ULR0 285 aaKnown RBP6.22□□□□□ -1.41
CD47-201ENST00000355354 TDRD6O60522 2096 aaKnown RBP6.22□□□□□ -1.41
CD47-201ENST00000355354 MED13Q9UHV7 2174 aa6.22□□□□□ -1.41
CD47-201ENST00000355354 E5RJQ4 531 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 CPLX1O14810 134 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 CTAGE5O15320 804 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 RAD51CO43502 376 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 ATP2C2O75185 946 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 PTPRAP18433 802 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 KCNJ2P63252 427 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 PPP3CAQ08209 521 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 UVSSAQ2YD98 709 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 IL31Q6EBC2 164 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 SPOPLQ6IQ16 392 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 RIPOR1Q6ZS17 1223 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 TTC7BQ86TV6 843 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 DDX12PQ92771 950 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 KCNMB3Q9NPA1 279 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 HELLSQ9NRZ9 838 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 KANSL3Q9P2N6 904 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 NME7Q9Y5B8 376 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 ACACAQ13085 2346 aa6.21□□□□□ -1.41
CD47-201ENST00000355354 RNF40O75150 1001 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 PABPC4Q13310 644 aaKnown RBP eCLIP6.21□□□□□ -1.42
CD47-201ENST00000355354 UTP14CQ5TAP6 766 aaKnown RBP6.21□□□□□ -1.42
CD47-201ENST00000355354 MYO7BQ6PIF6 2116 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 KIF2BQ8N4N8 673 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 SLC30A5Q8TAD4 765 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 FBXO25Q8TCJ0 367 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 NELFBQ8WX92 580 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 MKL1Q969V6 931 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 DDX23Q9BUQ8 820 aaKnown RBP6.21□□□□□ -1.42
CD47-201ENST00000355354 PCNX3Q9H6A9 2034 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 JMJD4Q9H9V9 463 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 USP40Q9NVE5 1235 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 SLC12A7Q9Y666 1083 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 KLRF2D3W0D1 207 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 SEMA3EO15041 775 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 TOP1P11387 765 aaKnown RBP6.21□□□□□ -1.42
CD47-201ENST00000355354 ADSSP30520 456 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 GTF2IP78347 998 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 GNL2Q13823 731 aaKnown RBP6.21□□□□□ -1.42
CD47-201ENST00000355354 WTAPQ15007 396 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 ACAP2Q15057 778 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 UBE3CQ15386 1083 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 TAF5Q15542 800 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 PTPRN2Q92932 1015 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 ZSCAN10Q96SZ4 725 aaPredicted RBP6.21□□□□□ -1.42
CD47-201ENST00000355354 SH3GL2Q99962 352 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 COLQQ9Y215 455 aaPredicted RBP6.21□□□□□ -1.42
CD47-201ENST00000355354 VWFP04275 2813 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 TULP1O00294 542 aaPredicted RBP6.21□□□□□ -1.42
CD47-201ENST00000355354 ZNF862O60290 1169 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 FGRP09769 529 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 GCLCP48506 637 aaPredicted RBP6.21□□□□□ -1.42
CD47-201ENST00000355354 LRIT3Q3SXY7 679 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 FAM109BQ6ICB4 259 aaPredicted RBP6.21□□□□□ -1.42
CD47-201ENST00000355354 NFXL1Q6ZNB6 911 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 CD99L2Q8TCZ2 262 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 ERLEC1Q96DZ1 483 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 ERO1AQ96HE7 468 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 ZBTB45Q96K62 511 aaPredicted RBP6.21□□□□□ -1.42
CD47-201ENST00000355354 CBWD1Q9BRT8 395 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 TUBGCP2Q9BSJ2 902 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 ZC3H12CQ9C0D7 883 aaKnown RBP6.21□□□□□ -1.42
CD47-201ENST00000355354 KCTD10Q9H3F6 313 aa6.21□□□□□ -1.42
CD47-201ENST00000355354 ZSCAN16Q9H4T2 348 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms