RNA–Protein interactions for RNA: tA(AGC)P

tA(AGC)P, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene tA(AGC)P, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tA(AGC)PtA(AGC)P TRS65P32893 560 aa7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P SOF1P33750 489 aaKnown RBP7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P HCS1P34243 683 aa7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P KRE29P40026 464 aa7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P YMR144WP40214 342 aaKnown RBP7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P IRC7P43623 340 aa7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P PCP1P53259 346 aa7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P MPP6P53725 186 aaPredicted RBP7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P KAP120Q02932 1032 aa7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P HFD1Q04458 532 aa7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P SEC13Q04491 297 aaKnown RBP7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P YPR147CQ06522 304 aaKnown RBP7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P MRL1Q06815 381 aa7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P YPR015CQ12531 247 aa7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P SEC16P48415 2195 aaKnown RBP7.44□□□□□ -1.22
tA(AGC)PtA(AGC)P PEP4P07267 405 aaKnown RBP7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P YOL162WP0CF19 215 aa7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P NUP1P20676 1076 aa7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P PUP2P32379 260 aa7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P AIM3P38266 947 aaKnown RBP7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P YHL012WP38709 493 aa7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P IDP2P41939 412 aa7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P INN1P53901 409 aa7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P MRP51Q02950 344 aa7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P YMR102CQ03177 834 aa7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P NIP7Q08962 181 aaKnown RBP7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P NCE102Q12207 173 aaRIP-Chip data7.43□□□□□ -1.22not detected
tA(AGC)PtA(AGC)P NFI1Q12216 726 aa7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P DBP10Q12389 995 aaKnown RBP7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P APC2Q12440 853 aa7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P YOL159C-AQ3E769 90 aa7.43□□□□□ -1.22
tA(AGC)PtA(AGC)P RPL24AP04449 155 aaKnown RBP7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P RPC40P07703 335 aaKnown RBP7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P REC107P21651 314 aa7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P CLB4P24871 460 aa7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P ASF2P32448 525 aaPredicted RBP7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P MSN4P33749 630 aa7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P FET3P38993 636 aa7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P RMR1P53060 241 aa7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P BRR6P53062 197 aa7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P YGR168CP53293 376 aa7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P MRPL19P53875 158 aa7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P MRPL1Q04599 285 aa7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P SNT309Q06091 175 aaPredicted RBP7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P HRT1Q08273 121 aa7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P SET6Q12529 373 aa7.42□□□□□ -1.22
tA(AGC)PtA(AGC)P PDA1P16387 420 aaKnown RBP7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P PRE2P30656 287 aaKnown RBP7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P THI4P32318 326 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P MCM10P32354 571 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P YKL071WP36086 256 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P SPC34P36131 295 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P ARN2P38724 620 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P NAB3P38996 802 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
tA(AGC)PtA(AGC)P GDI1P39958 451 aaKnown RBP7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P LSM4P40070 187 aaKnown RBP7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P GAT2P40209 560 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P YIL165CP40446 119 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P DIM1P41819 318 aaKnown RBP7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P YJR098CP47139 656 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P DAM1P53267 343 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P ELA1P53861 379 aaPredicted RBP7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P RSM24Q03976 319 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P SNO4Q04902 237 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P HSP33Q08914 237 aaKnown RBP7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P HSP32Q08992 237 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P MED2Q12124 431 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P YLR126CQ12288 251 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P MHF1Q3E835 90 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P YHR214C-EQ8TGK0 99 aa7.41□□□□□ -1.22
tA(AGC)PtA(AGC)P HAP4P14064 554 aa7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P PRP28P23394 588 aa7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P PPG1P32838 368 aa7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P MRPL16P38064 232 aa7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P CTF8P38877 133 aa7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P AVT7P40501 490 aa7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P NAS2P40555 220 aa7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P HMS2P47175 358 aa7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P HAS1Q03532 505 aaKnown RBP7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P DML1Q03652 475 aa7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P HMO1Q03973 246 aaKnown RBP7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P AGE1Q04412 482 aa7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P YPL225WQ08971 146 aaKnown RBP7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P SPC3Q12133 184 aa7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P HMS1Q12398 434 aa7.4□□□□□ -1.22
tA(AGC)PtA(AGC)P RRP7P25368 297 aaPredicted RBP7.39□□□□□ -1.23
tA(AGC)PtA(AGC)P CDC3P32457 520 aaKnown RBP7.39□□□□□ -1.23
tA(AGC)PtA(AGC)P PAD1P33751 242 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
tA(AGC)PtA(AGC)P NIC96P34077 839 aa7.39□□□□□ -1.23
tA(AGC)PtA(AGC)P MAL32P38158 584 aa7.39□□□□□ -1.23
tA(AGC)PtA(AGC)P VHR1P40522 640 aa7.39□□□□□ -1.23
tA(AGC)PtA(AGC)P MRK1P50873 501 aa7.39□□□□□ -1.23
tA(AGC)PtA(AGC)P ACS2P52910 683 aaKnown RBP7.39□□□□□ -1.23
tA(AGC)PtA(AGC)P PRM8P53174 237 aa7.39□□□□□ -1.23
tA(AGC)PtA(AGC)P ASI1P54074 624 aa7.39□□□□□ -1.23
tA(AGC)PtA(AGC)P YAP6Q03935 383 aa7.39□□□□□ -1.23
tA(AGC)PtA(AGC)P NDL1Q06568 189 aa7.39□□□□□ -1.23
tA(AGC)PtA(AGC)P SEC12P11655 471 aa7.38□□□□□ -1.23
tA(AGC)PtA(AGC)P ITR1P30605 584 aa7.38□□□□□ -1.23
tA(AGC)PtA(AGC)P NAB2P32505 525 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms