RNA–Protein interactions for RNA: tA(AGC)J

tA(AGC)J, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene tA(AGC)J, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tA(AGC)JtA(AGC)J TRS65P32893 560 aa7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J SOF1P33750 489 aaKnown RBP7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J HCS1P34243 683 aa7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J KRE29P40026 464 aa7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J YMR144WP40214 342 aaKnown RBP7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J IRC7P43623 340 aa7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J PCP1P53259 346 aa7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J MPP6P53725 186 aaPredicted RBP7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J KAP120Q02932 1032 aa7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J HFD1Q04458 532 aa7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J SEC13Q04491 297 aaKnown RBP7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J YPR147CQ06522 304 aaKnown RBP7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J MRL1Q06815 381 aa7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J YPR015CQ12531 247 aa7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J SEC16P48415 2195 aaKnown RBP7.44□□□□□ -1.22
tA(AGC)JtA(AGC)J PEP4P07267 405 aaKnown RBP7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J YOL162WP0CF19 215 aa7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J NUP1P20676 1076 aa7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J PUP2P32379 260 aa7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J AIM3P38266 947 aaKnown RBP7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J YHL012WP38709 493 aa7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J IDP2P41939 412 aa7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J INN1P53901 409 aa7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J MRP51Q02950 344 aa7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J YMR102CQ03177 834 aa7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J NIP7Q08962 181 aaKnown RBP7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J NCE102Q12207 173 aaRIP-Chip data7.43□□□□□ -1.22not detected
tA(AGC)JtA(AGC)J NFI1Q12216 726 aa7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J DBP10Q12389 995 aaKnown RBP7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J APC2Q12440 853 aa7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J YOL159C-AQ3E769 90 aa7.43□□□□□ -1.22
tA(AGC)JtA(AGC)J RPL24AP04449 155 aaKnown RBP7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J RPC40P07703 335 aaKnown RBP7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J REC107P21651 314 aa7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J CLB4P24871 460 aa7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J ASF2P32448 525 aaPredicted RBP7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J MSN4P33749 630 aa7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J FET3P38993 636 aa7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J RMR1P53060 241 aa7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J BRR6P53062 197 aa7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J YGR168CP53293 376 aa7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J MRPL19P53875 158 aa7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J MRPL1Q04599 285 aa7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J SNT309Q06091 175 aaPredicted RBP7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J HRT1Q08273 121 aa7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J SET6Q12529 373 aa7.42□□□□□ -1.22
tA(AGC)JtA(AGC)J PDA1P16387 420 aaKnown RBP7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J PRE2P30656 287 aaKnown RBP7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J THI4P32318 326 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J MCM10P32354 571 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J YKL071WP36086 256 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J SPC34P36131 295 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J ARN2P38724 620 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J NAB3P38996 802 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
tA(AGC)JtA(AGC)J GDI1P39958 451 aaKnown RBP7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J LSM4P40070 187 aaKnown RBP7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J GAT2P40209 560 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J YIL165CP40446 119 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J DIM1P41819 318 aaKnown RBP7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J YJR098CP47139 656 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J DAM1P53267 343 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J ELA1P53861 379 aaPredicted RBP7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J RSM24Q03976 319 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J SNO4Q04902 237 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J HSP33Q08914 237 aaKnown RBP7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J HSP32Q08992 237 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J MED2Q12124 431 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J YLR126CQ12288 251 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J MHF1Q3E835 90 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J YHR214C-EQ8TGK0 99 aa7.41□□□□□ -1.22
tA(AGC)JtA(AGC)J HAP4P14064 554 aa7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J PRP28P23394 588 aa7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J PPG1P32838 368 aa7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J MRPL16P38064 232 aa7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J CTF8P38877 133 aa7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J AVT7P40501 490 aa7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J NAS2P40555 220 aa7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J HMS2P47175 358 aa7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J HAS1Q03532 505 aaKnown RBP7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J DML1Q03652 475 aa7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J HMO1Q03973 246 aaKnown RBP7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J AGE1Q04412 482 aa7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J YPL225WQ08971 146 aaKnown RBP7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J SPC3Q12133 184 aa7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J HMS1Q12398 434 aa7.4□□□□□ -1.22
tA(AGC)JtA(AGC)J RRP7P25368 297 aaPredicted RBP7.39□□□□□ -1.23
tA(AGC)JtA(AGC)J CDC3P32457 520 aaKnown RBP7.39□□□□□ -1.23
tA(AGC)JtA(AGC)J PAD1P33751 242 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
tA(AGC)JtA(AGC)J NIC96P34077 839 aa7.39□□□□□ -1.23
tA(AGC)JtA(AGC)J MAL32P38158 584 aa7.39□□□□□ -1.23
tA(AGC)JtA(AGC)J VHR1P40522 640 aa7.39□□□□□ -1.23
tA(AGC)JtA(AGC)J MRK1P50873 501 aa7.39□□□□□ -1.23
tA(AGC)JtA(AGC)J ACS2P52910 683 aaKnown RBP7.39□□□□□ -1.23
tA(AGC)JtA(AGC)J PRM8P53174 237 aa7.39□□□□□ -1.23
tA(AGC)JtA(AGC)J ASI1P54074 624 aa7.39□□□□□ -1.23
tA(AGC)JtA(AGC)J YAP6Q03935 383 aa7.39□□□□□ -1.23
tA(AGC)JtA(AGC)J NDL1Q06568 189 aa7.39□□□□□ -1.23
tA(AGC)JtA(AGC)J SEC12P11655 471 aa7.38□□□□□ -1.23
tA(AGC)JtA(AGC)J ITR1P30605 584 aa7.38□□□□□ -1.23
tA(AGC)JtA(AGC)J NAB2P32505 525 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms