RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 UBA3Q99344 299 aa-0.21□□□□□ -2.44
snR48snR48 VPS1P21576 704 aaKnown RBP-0.22□□□□□ -2.44
snR48snR48 SLM4P38247 162 aa-0.22□□□□□ -2.44
snR48snR48 SER3P40054 469 aa-0.22□□□□□ -2.44
snR48snR48 DSE1P40077 573 aa-0.22□□□□□ -2.44
snR48snR48 TOM22P49334 152 aa-0.22□□□□□ -2.44
snR48snR48 TRM44Q02648 567 aaKnown RBP-0.22□□□□□ -2.44
snR48snR48 GRH1Q04410 372 aaKnown RBP-0.22□□□□□ -2.44
snR48snR48 YDR341CQ05506 607 aaKnown RBP-0.22□□□□□ -2.44
snR48snR48 SPO77Q06134 477 aa-0.22□□□□□ -2.44
snR48snR48 RPN8Q08723 338 aaKnown RBP-0.22□□□□□ -2.44
snR48snR48 MHP1P43638 1398 aa-0.22□□□□□ -2.45
snR48snR48 TDH1P00360 332 aaKnown RBP-0.23□□□□□ -2.45
snR48snR48 PDE2P06776 526 aa-0.23□□□□□ -2.45
snR48snR48 YER188C-AP0C0V2 99 aa-0.23□□□□□ -2.45
snR48snR48 FAD1P38913 306 aa-0.23□□□□□ -2.45
snR48snR48 YNL320WP42840 284 aa-0.23□□□□□ -2.45
snR48snR48 YJR141WP47172 347 aaPredicted RBP-0.23□□□□□ -2.45
snR48snR48 BIO4P53630 237 aa-0.23□□□□□ -2.45
snR48snR48 NUP49Q02199 472 aa-0.23□□□□□ -2.45
snR48snR48 EBS1Q03466 884 aaKnown RBP-0.23□□□□□ -2.45
snR48snR48 YOL019WQ08157 551 aa-0.23□□□□□ -2.45
snR48snR48 YPL247CQ12523 523 aa-0.23□□□□□ -2.45
snR48snR48 BOL1Q3E793 110 aa-0.23□□□□□ -2.45
snR48snR48 ISN1Q99312 450 aa-0.23□□□□□ -2.45
snR48snR48 HIS3P06633 220 aa-0.24□□□□□ -2.45
snR48snR48 DAP2P18962 818 aa-0.24□□□□□ -2.45
snR48snR48 RRP7P25368 297 aaPredicted RBP-0.24□□□□□ -2.45
snR48snR48 YKR045CP36138 183 aa-0.24□□□□□ -2.45
snR48snR48 NOC2P39744 710 aaKnown RBP-0.24□□□□□ -2.45
snR48snR48 EDC2P40023 145 aaPredicted RBP-0.24□□□□□ -2.45
snR48snR48 RSC1P53236 928 aa-0.24□□□□□ -2.45
snR48snR48 RTT102P53330 157 aa-0.24□□□□□ -2.45
snR48snR48 ALG9P53868 555 aaKnown RBP-0.24□□□□□ -2.45
snR48snR48 ACT1P60010 375 aaKnown RBP-0.24□□□□□ -2.45
snR48snR48 TAF10Q12030 206 aa-0.24□□□□□ -2.45
snR48snR48 TRM10Q12400 293 aa-0.24□□□□□ -2.45
snR48snR48 ERP3Q12403 225 aa-0.24□□□□□ -2.45
snR48snR48 EMC6Q12431 108 aa-0.24□□□□□ -2.45
snR48snR48 RED1P14291 827 aa-0.25□□□□□ -2.45
snR48snR48 MNL1P38888 796 aa-0.25□□□□□ -2.45
snR48snR48 RPL10P41805 221 aaKnown RBP-0.25□□□□□ -2.45
snR48snR48 RPL37AP49166 88 aaKnown RBP-0.25□□□□□ -2.45
snR48snR48 RPL37BP51402 88 aaKnown RBP-0.25□□□□□ -2.45
snR48snR48 YLR456WQ06199 204 aa-0.25□□□□□ -2.45
snR48snR48 YOL075CQ08234 1294 aa-0.25□□□□□ -2.45
snR48snR48 AAD15Q08361 143 aa-0.25□□□□□ -2.45
snR48snR48 ISA2Q12425 185 aa-0.25□□□□□ -2.45
snR48snR48 CBP2P03874 630 aaPredicted RBP-0.26□□□□□ -2.45
snR48snR48 MRP7P12687 371 aa-0.26□□□□□ -2.45
snR48snR48 ERV1P27882 189 aa-0.26□□□□□ -2.45
snR48snR48 COY1P34237 679 aa-0.26□□□□□ -2.45
snR48snR48 MPE1P35728 441 aaKnown RBP-0.26□□□□□ -2.45
snR48snR48 TRM7P38238 310 aaKnown RBP-0.26□□□□□ -2.45
snR48snR48 AYR1P40471 297 aa-0.26□□□□□ -2.45
snR48snR48 GPD2P41911 440 aaKnown RBP-0.26□□□□□ -2.45
snR48snR48 EPL1P43572 832 aa-0.26□□□□□ -2.45
snR48snR48 IRC6P43615 237 aa-0.26□□□□□ -2.45
snR48snR48 UFD1P53044 361 aa-0.26□□□□□ -2.45
snR48snR48 MPS2P53159 387 aa-0.26□□□□□ -2.45
snR48snR48 TPC1P53257 314 aa-0.26□□□□□ -2.45
snR48snR48 COS6P53344 381 aa-0.26□□□□□ -2.45
snR48snR48 MRPL19P53875 158 aa-0.26□□□□□ -2.45
snR48snR48 PFK27Q12471 397 aaPredicted RBP-0.26□□□□□ -2.45
snR48snR48 YHR045WP38775 560 aa-0.27□□□□□ -2.45
snR48snR48 VPS72Q03388 795 aa-0.27□□□□□ -2.45
snR48snR48 SGA1P08019 549 aa-0.28□□□□□ -2.45
snR48snR48 YCR102CP25608 368 aa-0.28□□□□□ -2.45
snR48snR48 IMP2'P32351 346 aa-0.28□□□□□ -2.45
snR48snR48 YKL187CP34231 750 aa-0.28□□□□□ -2.45
snR48snR48 MYO3P36006 1272 aa-0.28□□□□□ -2.45
snR48snR48 YOR062CP36025 268 aa-0.28□□□□□ -2.45
snR48snR48 KAP104P38217 918 aaKnown RBP-0.28□□□□□ -2.45
snR48snR48 SPP381P38282 291 aaPredicted RBP-0.28□□□□□ -2.45
snR48snR48 PMT4P46971 762 aa-0.28□□□□□ -2.45
snR48snR48 DPM1P14020 267 aaKnown RBP-0.29□□□□□ -2.46
snR48snR48 YHR177WP38867 453 aa-0.29□□□□□ -2.46
snR48snR48 HUA1P40325 198 aa-0.29□□□□□ -2.46
snR48snR48 RSM27P53305 110 aa-0.29□□□□□ -2.46
snR48snR48 OSH6Q02201 448 aa-0.29□□□□□ -2.46
snR48snR48 MIM1Q08176 113 aa-0.29□□□□□ -2.46
snR48snR48 RRI2Q12348 645 aa-0.29□□□□□ -2.46
snR48snR48 RAD10P06838 210 aa-0.3□□□□□ -2.46
snR48snR48 CPR2P23285 205 aa-0.3□□□□□ -2.46
snR48snR48 SUR1P33300 382 aa-0.3□□□□□ -2.46
snR48snR48 LYS12P40495 371 aaKnown RBP-0.3□□□□□ -2.46
snR48snR48 LST7P53237 242 aa-0.3□□□□□ -2.46
snR48snR48 NOP6Q07623 225 aaKnown RBP-0.3□□□□□ -2.46
snR48snR48 MED1Q12321 566 aa-0.3□□□□□ -2.46
snR48snR48 RPN6Q12377 434 aa-0.3□□□□□ -2.46
snR48snR48 UBR2Q07963 1872 aa-0.31□□□□□ -2.46
snR48snR48 CDC7P06243 507 aa-0.31□□□□□ -2.46
snR48snR48 URA7P28274 579 aaKnown RBP-0.31□□□□□ -2.46
snR48snR48 KTI12P34253 313 aaKnown RBP-0.31□□□□□ -2.46
snR48snR48 SRP72P38688 640 aaKnown RBP-0.31□□□□□ -2.46
snR48snR48 PEP8P40335 379 aa-0.31□□□□□ -2.46
snR48snR48 ARC18Q05933 178 aaKnown RBP-0.31□□□□□ -2.46
snR48snR48 CTS2Q06350 511 aa-0.31□□□□□ -2.46
snR48snR48 ZWF1P11412 505 aaKnown RBP-0.32□□□□□ -2.46
snR48snR48 KRE6P32486 720 aa-0.32□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms