RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 NGL1Q08213 363 aaKnown RBP2.26□□□□□ -2.05
snR43snR43 YLR053CQ12026 108 aa2.26□□□□□ -2.05
snR43snR43 ATG34Q12292 412 aa2.26□□□□□ -2.05
snR43snR43 NOP58Q12499 511 aaKnown RBP2.26□□□□□ -2.05
snR43snR43 URA2P07259 2214 aaKnown RBP2.25□□□□□ -2.05
snR43snR43 YER145C-AA0A023PYF4 145 aa2.25□□□□□ -2.05
snR43snR43 CCW14O13547 238 aa2.25□□□□□ -2.05
snR43snR43 RHO1P06780 209 aaKnown RBP2.25□□□□□ -2.05
snR43snR43 RAP1P11938 827 aa2.25□□□□□ -2.05
snR43snR43 TFS1P14306 219 aa2.25□□□□□ -2.05
snR43snR43 HIR2P32480 875 aa2.25□□□□□ -2.05
snR43snR43 FRE2P36033 711 aa2.25□□□□□ -2.05
snR43snR43 SPP381P38282 291 aaPredicted RBP2.25□□□□□ -2.05
snR43snR43 SEC31P38968 1273 aaKnown RBP2.25□□□□□ -2.05
snR43snR43 YJL193WP39542 402 aa2.25□□□□□ -2.05
snR43snR43 GPP2P40106 250 aaKnown RBP2.25□□□□□ -2.05
snR43snR43 AYR1P40471 297 aa2.25□□□□□ -2.05
snR43snR43 LYS12P40495 371 aaKnown RBP2.25□□□□□ -2.05
snR43snR43 IDP2P41939 412 aa2.25□□□□□ -2.05
snR43snR43 QRI1P43123 477 aaKnown RBP2.25□□□□□ -2.05
snR43snR43 LIA1P47120 325 aaKnown RBP2.25□□□□□ -2.05
snR43snR43 PAC10P48363 199 aa2.25□□□□□ -2.05
snR43snR43 TAF4P50105 388 aa2.25□□□□□ -2.05
snR43snR43 MRPL19P53875 158 aa2.25□□□□□ -2.05
snR43snR43 URC2Q04411 772 aa2.25□□□□□ -2.05
snR43snR43 GPN2Q08726 347 aaPredicted RBP2.25□□□□□ -2.05
snR43snR43 UAF30Q08747 228 aa2.25□□□□□ -2.05
snR43snR43 RPN5Q12250 445 aaKnown RBP2.25□□□□□ -2.05
snR43snR43 CDC43P18898 376 aa2.24□□□□□ -2.05
snR43snR43 SAN1P22470 610 aa2.24□□□□□ -2.05
snR43snR43 RPB9P27999 122 aa2.24□□□□□ -2.05
snR43snR43 ITR1P30605 584 aa2.24□□□□□ -2.05
snR43snR43 PRE4P30657 266 aa2.24□□□□□ -2.05
snR43snR43 DBF20P32328 564 aa2.24□□□□□ -2.05
snR43snR43 DGR2P32330 852 aa2.24□□□□□ -2.05
snR43snR43 SEC17P32602 292 aa2.24□□□□□ -2.05
snR43snR43 PPZ2P33329 710 aa2.24□□□□□ -2.05
snR43snR43 CDS1P38221 457 aa2.24□□□□□ -2.05
snR43snR43 YBR220CP38318 560 aa2.24□□□□□ -2.05
snR43snR43 ARB1P40024 610 aaKnown RBP2.24□□□□□ -2.05
snR43snR43 SHO1P40073 367 aa2.24□□□□□ -2.05
snR43snR43 YNL208WP40159 199 aaKnown RBP2.24□□□□□ -2.05
snR43snR43 JEM1P40358 645 aa2.24□□□□□ -2.05
snR43snR43 PFK26P40433 827 aaKnown RBP2.24□□□□□ -2.05
snR43snR43 ARF3P40994 183 aaRIP-Chip data2.24□□□□□ -2.05not detected
snR43snR43 YFR054CP43622 192 aa2.24□□□□□ -2.05
snR43snR43 FAR3P46671 204 aa2.24□□□□□ -2.05
snR43snR43 NIT2P47016 307 aa2.24□□□□□ -2.05
snR43snR43 URB2P47108 1174 aa2.24□□□□□ -2.05
snR43snR43 SBH2P52871 88 aa2.24□□□□□ -2.05
snR43snR43 PCP1P53259 346 aa2.24□□□□□ -2.05
snR43snR43 YAP1802P53309 568 aa2.24□□□□□ -2.05
snR43snR43 MNT4P53745 580 aa2.24□□□□□ -2.05
snR43snR43 ASI1P54074 624 aa2.24□□□□□ -2.05
snR43snR43 ACS1Q01574 713 aa2.24□□□□□ -2.05
snR43snR43 YDR476CQ03362 224 aa2.24□□□□□ -2.05
snR43snR43 INP1Q03694 420 aa2.24□□□□□ -2.05
snR43snR43 EKI1Q03764 534 aa2.24□□□□□ -2.05
snR43snR43 TVP15Q03860 143 aa2.24□□□□□ -2.05
snR43snR43 RAD30Q04049 632 aa2.24□□□□□ -2.05
snR43snR43 SNX41Q04053 625 aa2.24□□□□□ -2.05
snR43snR43 COQ11Q05892 277 aa2.24□□□□□ -2.05
snR43snR43 STE23Q06010 1027 aa2.24□□□□□ -2.05
snR43snR43 MCP1Q12106 302 aa2.24□□□□□ -2.05
snR43snR43 YDL180WQ12301 547 aa2.24□□□□□ -2.05
snR43snR43 PSY3Q12318 242 aa2.24□□□□□ -2.05
snR43snR43 JLP1Q12358 412 aa2.24□□□□□ -2.05
snR43snR43 SPE4Q12455 300 aa2.24□□□□□ -2.05
snR43snR43 NOP56Q12460 504 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
snR43snR43 YKL018C-AQ3E7A7 99 aa2.24□□□□□ -2.05
snR43snR43 RAS2P01120 322 aaKnown RBP2.23□□□□□ -2.05
snR43snR43 REP1P03871 373 aa2.23□□□□□ -2.05
snR43snR43 PUT2P07275 575 aa2.23□□□□□ -2.05
snR43snR43 UNG1P12887 359 aa2.23□□□□□ -2.05
snR43snR43 PRP28P23394 588 aa2.23□□□□□ -2.05
snR43snR43 RVS161P25343 265 aaKnown RBP2.23□□□□□ -2.05
snR43snR43 ILV6P25605 309 aaKnown RBP2.23□□□□□ -2.05
snR43snR43 PHO91P27514 894 aa2.23□□□□□ -2.05
snR43snR43 RAD14P28519 371 aa2.23□□□□□ -2.05
snR43snR43 ITR2P30606 609 aa2.23□□□□□ -2.05
snR43snR43 CYS4P32582 507 aaKnown RBP2.23□□□□□ -2.05
snR43snR43 YKL102CP34249 101 aa2.23□□□□□ -2.05
snR43snR43 CHK1P38147 527 aa2.23□□□□□ -2.05
snR43snR43 EXO84P38261 753 aa2.23□□□□□ -2.05
snR43snR43 MTC4P38335 694 aaKnown RBP2.23□□□□□ -2.05
snR43snR43 COG3P40094 801 aa2.23□□□□□ -2.05
snR43snR43 RFC4P40339 323 aaKnown RBP2.23□□□□□ -2.05
snR43snR43 YIL029CP40538 142 aa2.23□□□□□ -2.05
snR43snR43 YIR020CP40575 100 aa2.23□□□□□ -2.05
snR43snR43 GAB1P41733 394 aa2.23□□□□□ -2.05
snR43snR43 ABM1P47146 123 aa2.23□□□□□ -2.05
snR43snR43 DBP6P53734 629 aaKnown RBP2.23□□□□□ -2.05
snR43snR43 LGE1Q02796 332 aaKnown RBP2.23□□□□□ -2.05
snR43snR43 NAT4Q04751 285 aa2.23□□□□□ -2.05
snR43snR43 COX20Q04935 205 aa2.23□□□□□ -2.05
snR43snR43 YLR036CQ07986 203 aa2.23□□□□□ -2.05
snR43snR43 YOL131WQ08270 108 aa2.23□□□□□ -2.05
snR43snR43 MSA1Q08471 629 aa2.23□□□□□ -2.05
snR43snR43 RDL2Q08742 149 aaKnown RBP2.23□□□□□ -2.05
snR43snR43 RKI1Q12189 258 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms