RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W PAM18Q07914 168 aa1.94□□□□□ -2.1
RRP6YOR001W SMC5Q08204 1093 aa1.94□□□□□ -2.1
RRP6YOR001W SRL1Q08673 210 aa1.94□□□□□ -2.1
RRP6YOR001W BTS1Q12051 335 aa1.94□□□□□ -2.1
RRP6YOR001W MCT1Q12283 360 aa1.94□□□□□ -2.1
RRP6YOR001W SET6Q12529 373 aa1.94□□□□□ -2.1
RRP6YOR001W TRP1P00912 224 aa1.93□□□□□ -2.1
RRP6YOR001W RPL31AP0C2H8 113 aaKnown RBP1.93□□□□□ -2.1
RRP6YOR001W DAL82P21705 255 aa1.93□□□□□ -2.1
RRP6YOR001W MCK1P21965 375 aaKnown RBP1.93□□□□□ -2.1
RRP6YOR001W YSR3P23501 404 aa1.93□□□□□ -2.1
RRP6YOR001W SPO23P33757 523 aa1.93□□□□□ -2.1
RRP6YOR001W MCH2P36032 473 aa1.93□□□□□ -2.1
RRP6YOR001W SWD2P36104 329 aaPredicted RBP1.93□□□□□ -2.1
RRP6YOR001W RPC37P36121 282 aa1.93□□□□□ -2.1
RRP6YOR001W NAT2P37293 288 aa1.93□□□□□ -2.1
RRP6YOR001W RCK2P38623 610 aa1.93□□□□□ -2.1
RRP6YOR001W SIP3P38717 1229 aa1.93□□□□□ -2.1
RRP6YOR001W MTC6P38849 526 aa1.93□□□□□ -2.1
RRP6YOR001W PTI1P39927 425 aaPredicted RBP1.93□□□□□ -2.1
RRP6YOR001W SNM1P40993 198 aa1.93□□□□□ -2.1
RRP6YOR001W LCB3P47013 409 aa1.93□□□□□ -2.1
RRP6YOR001W YJR030CP47101 745 aa1.93□□□□□ -2.1
RRP6YOR001W MRM2P53123 320 aa1.93□□□□□ -2.1
RRP6YOR001W MSO1P53604 210 aaKnown RBP1.93□□□□□ -2.1
RRP6YOR001W WSC2P53832 503 aa1.93□□□□□ -2.1
RRP6YOR001W PBP4Q07362 185 aaKnown RBP1.93□□□□□ -2.1
RRP6YOR001W CMS1Q07897 291 aaKnown RBP1.93□□□□□ -2.1
RRP6YOR001W PCL9Q12477 304 aa1.93□□□□□ -2.1
RRP6YOR001W YBL111CQ3E7Y5 667 aa1.93□□□□□ -2.1
RRP6YOR001W CFT1Q06632 1357 aaKnown RBP1.93□□□□□ -2.1
RRP6YOR001W PIS1P06197 220 aaKnown RBP1.93□□□□□ -2.1
RRP6YOR001W AGA1P32323 725 aa1.93□□□□□ -2.1
RRP6YOR001W TRS65P32893 560 aa1.93□□□□□ -2.1
RRP6YOR001W MRX3P38172 270 aa1.93□□□□□ -2.1
RRP6YOR001W BIG1P38813 335 aa1.93□□□□□ -2.1
RRP6YOR001W ALD5P40047 520 aaKnown RBP1.93□□□□□ -2.1
RRP6YOR001W DDI1P40087 428 aa1.93□□□□□ -2.1
RRP6YOR001W GDS1P41913 522 aa1.93□□□□□ -2.1
RRP6YOR001W ALG11P53954 548 aaKnown RBP1.93□□□□□ -2.1
RRP6YOR001W SUR7P54003 302 aa1.93□□□□□ -2.1
RRP6YOR001W ENT5Q03769 411 aaKnown RBP1.93□□□□□ -2.1
RRP6YOR001W TRM82Q03774 444 aa1.93□□□□□ -2.1
RRP6YOR001W VBA1Q04301 562 aa1.93□□□□□ -2.1
RRP6YOR001W GTO3Q04806 366 aa1.93□□□□□ -2.1
RRP6YOR001W YHC1Q05900 231 aaKnown RBP1.93□□□□□ -2.1
RRP6YOR001W TSR1Q07381 788 aaKnown RBP1.93□□□□□ -2.1
RRP6YOR001W SNA4Q07549 140 aa1.93□□□□□ -2.1
RRP6YOR001W MFG1Q07684 458 aa1.93□□□□□ -2.1
RRP6YOR001W CSM4Q08955 156 aa1.93□□□□□ -2.1
RRP6YOR001W YPQ1Q12010 308 aa1.93□□□□□ -2.1
RRP6YOR001W MSH5Q12175 901 aa1.93□□□□□ -2.1
RRP6YOR001W FRE8Q12209 686 aa1.93□□□□□ -2.1
RRP6YOR001W YOR029WQ12243 111 aa1.93□□□□□ -2.1
RRP6YOR001W YER078W-AQ3E7A2 54 aa1.93□□□□□ -2.1
RRP6YOR001W REP1P03871 373 aa1.92□□□□□ -2.1
RRP6YOR001W RPS8AP0CX39 200 aaKnown RBP1.92□□□□□ -2.1
RRP6YOR001W RPS8BP0CX40 200 aaKnown RBP1.92□□□□□ -2.1
RRP6YOR001W VPS1P21576 704 aaKnown RBP1.92□□□□□ -2.1
RRP6YOR001W RPL16AP26784 199 aaKnown RBP1.92□□□□□ -2.1
RRP6YOR001W PMT2P31382 759 aa1.92□□□□□ -2.1
RRP6YOR001W ASF2P32448 525 aaPredicted RBP1.92□□□□□ -2.1
RRP6YOR001W ZRT1P32804 376 aa1.92□□□□□ -2.1
RRP6YOR001W PDC2P32896 925 aa1.92□□□□□ -2.1
RRP6YOR001W WWM1P43582 211 aaKnown RBP1.92□□□□□ -2.1
RRP6YOR001W YJR085CP47131 105 aaKnown RBP1.92□□□□□ -2.1
RRP6YOR001W UBC13P52490 153 aa1.92□□□□□ -2.1
RRP6YOR001W MST27P53176 234 aa1.92□□□□□ -2.1
RRP6YOR001W NOP13P53883 403 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
RRP6YOR001W GIM3P53900 129 aa1.92□□□□□ -2.1
RRP6YOR001W YNL040WP53960 456 aaPredicted RBP1.92□□□□□ -2.1
RRP6YOR001W SCS7Q03529 384 aa1.92□□□□□ -2.1
RRP6YOR001W SSQ1Q05931 657 aaPredicted RBP1.92□□□□□ -2.1
RRP6YOR001W YPR172WQ06608 200 aa1.92□□□□□ -2.1
RRP6YOR001W RDL2Q08742 149 aaKnown RBP1.92□□□□□ -2.1
RRP6YOR001W DDC1Q08949 612 aa1.92□□□□□ -2.1
RRP6YOR001W YGK3Q12222 375 aaPredicted RBP1.92□□□□□ -2.1
RRP6YOR001W PRM4Q12498 284 aa1.92□□□□□ -2.1
RRP6YOR001W NCB2Q92317 146 aa1.92□□□□□ -2.1
RRP6YOR001W YCL021W-AQ96VH3 125 aa1.92□□□□□ -2.1
RRP6YOR001W IZH4Q99393 312 aa1.92□□□□□ -2.1
RRP6YOR001W RPP0P05317 312 aaKnown RBP1.91□□□□□ -2.1
RRP6YOR001W HEM4P06174 275 aa1.91□□□□□ -2.1
RRP6YOR001W PRO3P32263 286 aaKnown RBP1.91□□□□□ -2.1
RRP6YOR001W MRPL6P32904 214 aa1.91□□□□□ -2.1
RRP6YOR001W YKL071WP36086 256 aa1.91□□□□□ -2.1
RRP6YOR001W PRM5P40476 318 aa1.91□□□□□ -2.1
RRP6YOR001W YIL067CP40514 678 aa1.91□□□□□ -2.1
RRP6YOR001W IDP2P41939 412 aa1.91□□□□□ -2.1
RRP6YOR001W MRPL50P53724 139 aa1.91□□□□□ -2.1
RRP6YOR001W SNZ1Q03148 297 aa1.91□□□□□ -2.1
RRP6YOR001W SNX41Q04053 625 aa1.91□□□□□ -2.1
RRP6YOR001W MYO5Q04439 1219 aaKnown RBP1.91□□□□□ -2.1
RRP6YOR001W SPO77Q06134 477 aa1.91□□□□□ -2.1
RRP6YOR001W ASR1Q06834 288 aa1.91□□□□□ -2.1
RRP6YOR001W TAF10Q12030 206 aa1.91□□□□□ -2.1
RRP6YOR001W ICT1Q12385 394 aa1.91□□□□□ -2.1
RRP6YOR001W YDL199CQ12407 687 aa1.91□□□□□ -2.1
RRP6YOR001W GIS3Q12418 502 aa1.91□□□□□ -2.1
RRP6YOR001W EAF3Q12432 401 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 64.9 ms