RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C RNH202Q05635 350 aa8.87□□□□□ -0.99
SPT20YOL148C LUC7Q07508 261 aaPredicted RBP8.87□□□□□ -0.99
SPT20YOL148C TRM13Q12383 476 aa8.87□□□□□ -0.99
SPT20YOL148C SRN2Q99176 213 aa8.87□□□□□ -0.99
SPT20YOL148C AI3P03877 415 aa8.86□□□□□ -0.99
SPT20YOL148C CDC7P06243 507 aa8.86□□□□□ -0.99
SPT20YOL148C CAR2P07991 424 aaKnown RBP8.86□□□□□ -0.99
SPT20YOL148C MGR1P25573 417 aa8.86□□□□□ -0.99
SPT20YOL148C ECT1P33412 323 aa8.86□□□□□ -0.99
SPT20YOL148C MRPL37P36532 105 aa8.86□□□□□ -0.99
SPT20YOL148C PAU24P38155 120 aa8.86□□□□□ -0.99
SPT20YOL148C YBR071WP38243 211 aa8.86□□□□□ -0.99
SPT20YOL148C OCA5P38738 679 aa8.86□□□□□ -0.99
SPT20YOL148C CHL4P38907 458 aa8.86□□□□□ -0.99
SPT20YOL148C ASP1P38986 381 aaPredicted RBP8.86□□□□□ -0.99
SPT20YOL148C DOC1P53068 250 aa8.86□□□□□ -0.99
SPT20YOL148C BTS1Q12051 335 aa8.86□□□□□ -0.99
SPT20YOL148C TMS1Q12116 473 aa8.86□□□□□ -0.99
SPT20YOL148C PUT1P09368 476 aa8.85□□□□□ -0.99
SPT20YOL148C SSA3P09435 649 aaKnown RBP8.85□□□□□ -0.99
SPT20YOL148C HOM2P13663 365 aaKnown RBP8.85□□□□□ -0.99
SPT20YOL148C AFR1P33304 620 aa8.85□□□□□ -0.99
SPT20YOL148C ALG3P38179 458 aa8.85□□□□□ -0.99
SPT20YOL148C ATG8P38182 117 aaRIP-Chip data8.85□□□□□ -0.99not detected
SPT20YOL148C ARO9P38840 513 aaPredicted RBP8.85□□□□□ -0.99
SPT20YOL148C CSN12P47130 423 aa8.85□□□□□ -0.99
SPT20YOL148C SYF2P53277 215 aaPredicted RBP8.85□□□□□ -0.99
SPT20YOL148C PAU12P53343 120 aa8.85□□□□□ -0.99
SPT20YOL148C EGD1Q02642 157 aaKnown RBP8.85□□□□□ -0.99
SPT20YOL148C YPL108WQ02872 168 aaPredicted RBP8.85□□□□□ -0.99
SPT20YOL148C OST6Q03723 332 aa8.85□□□□□ -0.99
SPT20YOL148C KEI1Q06346 221 aa8.85□□□□□ -0.99
SPT20YOL148C IRC10Q08118 586 aa8.85□□□□□ -0.99
SPT20YOL148C PER33Q12144 273 aa8.85□□□□□ -0.99
SPT20YOL148C INP53Q12271 1107 aa8.85□□□□□ -0.99
SPT20YOL148C RRP42Q12277 265 aaPredicted RBP8.85□□□□□ -0.99
SPT20YOL148C HIS5P07172 385 aa8.84□□□□□ -0.99
SPT20YOL148C PRB1P09232 635 aa8.84□□□□□ -0.99
SPT20YOL148C HOM3P10869 527 aa8.84□□□□□ -0.99
SPT20YOL148C SCH9P11792 824 aaKnown RBP8.84□□□□□ -0.99
SPT20YOL148C SSS1P35179 80 aa8.84□□□□□ -0.99
SPT20YOL148C MTH1P35198 433 aa8.84□□□□□ -0.99
SPT20YOL148C PZF1P39933 429 aa8.84□□□□□ -0.99
SPT20YOL148C POP1P41812 875 aa8.84□□□□□ -0.99
SPT20YOL148C OKP1P53298 406 aa8.84□□□□□ -0.99
SPT20YOL148C VBA4Q04602 768 aaKnown RBP8.84□□□□□ -0.99
SPT20YOL148C YPD1Q07688 167 aa8.84□□□□□ -0.99
SPT20YOL148C TEN1Q07921 160 aa8.84□□□□□ -0.99
SPT20YOL148C SPC3Q12133 184 aa8.84□□□□□ -0.99
SPT20YOL148C CTS1P29029 562 aa8.84□□□□□ -0.99
SPT20YOL148C SCM4P32564 187 aa8.84□□□□□ -0.99
SPT20YOL148C DOA4P32571 926 aa8.84□□□□□ -0.99
SPT20YOL148C SFK1P35735 353 aa8.84□□□□□ -0.99
SPT20YOL148C DRE2P36152 348 aa8.84□□□□□ -0.99
SPT20YOL148C AVT5P38176 459 aa8.84□□□□□ -0.99
SPT20YOL148C PEX32P38292 413 aa8.84□□□□□ -0.99
SPT20YOL148C YJR111CP47148 283 aaKnown RBP8.84□□□□□ -0.99
SPT20YOL148C FMP41P53889 259 aaKnown RBP8.84□□□□□ -0.99
SPT20YOL148C YNL134CP53912 376 aaKnown RBP8.84□□□□□ -0.99
SPT20YOL148C ARG5,6Q01217 863 aa8.84□□□□□ -0.99
SPT20YOL148C MEH1Q02205 184 aa8.84□□□□□ -0.99
SPT20YOL148C TY1A-MR1Q04215 440 aa8.84□□□□□ -0.99
SPT20YOL148C UTP15Q04305 513 aaKnown RBP8.84□□□□□ -0.99
SPT20YOL148C ARG7Q04728 441 aa8.84□□□□□ -0.99
SPT20YOL148C YPR127WQ06494 345 aa8.84□□□□□ -0.99
SPT20YOL148C GRC3Q07845 632 aa8.84□□□□□ -0.99
SPT20YOL148C THI73Q07904 523 aa8.84□□□□□ -0.99
SPT20YOL148C YPR011CQ12251 326 aa8.84□□□□□ -0.99
SPT20YOL148C TY1A-BLQ12266 440 aa8.84□□□□□ -0.99
SPT20YOL148C PHO5P00635 467 aa8.83□□□□□ -1
SPT20YOL148C YAR066WP0CX18 203 aa8.83□□□□□ -1
SPT20YOL148C YHR214WP0CX19 203 aa8.83□□□□□ -1
SPT20YOL148C APN1P22936 367 aa8.83□□□□□ -1
SPT20YOL148C DSS4P32601 143 aa8.83□□□□□ -1
SPT20YOL148C TIM23P32897 222 aa8.83□□□□□ -1
SPT20YOL148C RPS20P38701 121 aaKnown RBP8.83□□□□□ -1
SPT20YOL148C HSE1P38753 452 aa8.83□□□□□ -1
SPT20YOL148C YHR177WP38867 453 aa8.83□□□□□ -1
SPT20YOL148C RFC2P40348 353 aa8.83□□□□□ -1
SPT20YOL148C ALK1P43633 760 aaKnown RBP8.83□□□□□ -1
SPT20YOL148C SIP4P46954 829 aa8.83□□□□□ -1
SPT20YOL148C FAA4P47912 694 aaKnown RBP8.83□□□□□ -1
SPT20YOL148C OCA1P50946 238 aaPredicted RBP8.83□□□□□ -1
SPT20YOL148C SCS3P53012 380 aa8.83□□□□□ -1
SPT20YOL148C RTS3P53289 263 aa8.83□□□□□ -1
SPT20YOL148C TRM112P53738 135 aaPredicted RBP8.83□□□□□ -1
SPT20YOL148C OCA2P53949 197 aa8.83□□□□□ -1
SPT20YOL148C TY1A-DR2Q03964 440 aaKnown RBP8.83□□□□□ -1
SPT20YOL148C PUN1Q06991 263 aa8.83□□□□□ -1
SPT20YOL148C SDO1Q07953 250 aaKnown RBP8.83□□□□□ -1
SPT20YOL148C DCI1Q08558 271 aa8.83□□□□□ -1
SPT20YOL148C PST1Q12355 444 aa8.83□□□□□ -1
SPT20YOL148C LEU4P06208 619 aaKnown RBP8.82□□□□□ -1
SPT20YOL148C MRPL44P19956 98 aa8.82□□□□□ -1
SPT20YOL148C MIH1P23748 554 aa8.82□□□□□ -1
SPT20YOL148C SLM5P25345 492 aaKnown RBP8.82□□□□□ -1
SPT20YOL148C BUB3P26449 341 aa8.82□□□□□ -1
SPT20YOL148C PPG1P32838 368 aa8.82□□□□□ -1
SPT20YOL148C PRP18P33411 251 aaPredicted RBP8.82□□□□□ -1
SPT20YOL148C COS9P36034 407 aa8.82□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms