RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W FAR1P21268 830 aa2.93□□□□□ -1.94
UBP8YMR223W CMK2P22517 447 aa2.93□□□□□ -1.94
UBP8YMR223W KRE2P27809 442 aa2.93□□□□□ -1.94
UBP8YMR223W ECM25P32525 599 aa2.93□□□□□ -1.94
UBP8YMR223W NRP1P32770 719 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
UBP8YMR223W YKL162CP36052 402 aa2.93□□□□□ -1.94
UBP8YMR223W UTH1P36135 365 aa2.93□□□□□ -1.94
UBP8YMR223W MIC12P38341 106 aa2.93□□□□□ -1.94
UBP8YMR223W RRP4P38792 359 aaKnown RBP2.93□□□□□ -1.94
UBP8YMR223W YER121WP40076 114 aa2.93□□□□□ -1.94
UBP8YMR223W AGE2P40529 298 aa2.93□□□□□ -1.94
UBP8YMR223W SNZ3P43545 298 aa2.93□□□□□ -1.94
UBP8YMR223W WWM1P43582 211 aaKnown RBP2.93□□□□□ -1.94
UBP8YMR223W KAP114P53067 1004 aa2.93□□□□□ -1.94
UBP8YMR223W YGL159WP53110 370 aa2.93□□□□□ -1.94
UBP8YMR223W SNZ2P53824 298 aa2.93□□□□□ -1.94
UBP8YMR223W VAC7P53950 1165 aa2.93□□□□□ -1.94
UBP8YMR223W NUP116Q02630 1113 aa2.93□□□□□ -1.94
UBP8YMR223W ODC1Q03028 310 aa2.93□□□□□ -1.94
UBP8YMR223W VPS60Q03390 229 aa2.93□□□□□ -1.94
UBP8YMR223W FAR8Q05040 523 aa2.93□□□□□ -1.94
UBP8YMR223W DCR2Q05924 578 aa2.93□□□□□ -1.94
UBP8YMR223W ATG17Q06410 417 aa2.93□□□□□ -1.94
UBP8YMR223W SDO1Q07953 250 aaKnown RBP2.93□□□□□ -1.94
UBP8YMR223W DNL4Q08387 944 aaPredicted RBP2.93□□□□□ -1.94
UBP8YMR223W YPR022CQ12139 1133 aa2.93□□□□□ -1.94
UBP8YMR223W RPS16AP0CX51 143 aaKnown RBP2.92□□□□□ -1.94
UBP8YMR223W RPS16BP0CX52 143 aaKnown RBP2.92□□□□□ -1.94
UBP8YMR223W GIT1P25346 518 aa2.92□□□□□ -1.94
UBP8YMR223W MEI4P29467 408 aa2.92□□□□□ -1.94
UBP8YMR223W SKG6P32900 734 aaPredicted RBP2.92□□□□□ -1.94
UBP8YMR223W TAF14P35189 244 aa2.92□□□□□ -1.94
UBP8YMR223W SPT10P35208 640 aa2.92□□□□□ -1.94
UBP8YMR223W ERG28P40030 148 aa2.92□□□□□ -1.94
UBP8YMR223W YNL194CP40169 301 aa2.92□□□□□ -1.94
UBP8YMR223W ICE2P40499 491 aa2.92□□□□□ -1.94
UBP8YMR223W GAB1P41733 394 aa2.92□□□□□ -1.94
UBP8YMR223W CWC23P52868 283 aaPredicted RBP2.92□□□□□ -1.94
UBP8YMR223W PRM15Q03262 622 aa2.92□□□□□ -1.94
UBP8YMR223W YMR209CQ03648 457 aa2.92□□□□□ -1.94
UBP8YMR223W YMR226CQ05016 267 aaKnown RBP2.92□□□□□ -1.94
UBP8YMR223W SEC10Q06245 871 aa2.92□□□□□ -1.94
UBP8YMR223W YPL199CQ08954 240 aa2.92□□□□□ -1.94
UBP8YMR223W MSH5Q12175 901 aa2.92□□□□□ -1.94
UBP8YMR223W RKM5Q12367 367 aa2.92□□□□□ -1.94
UBP8YMR223W ADE4P04046 510 aaKnown RBP2.91□□□□□ -1.94
UBP8YMR223W SNF6P18888 332 aa2.91□□□□□ -1.94
UBP8YMR223W RPL24BP24000 155 aaKnown RBP2.91□□□□□ -1.94
UBP8YMR223W DBR1P24309 405 aaKnown RBP2.91□□□□□ -1.94
UBP8YMR223W RRT12P25381 491 aa2.91□□□□□ -1.94
UBP8YMR223W SIN4P32259 974 aa2.91□□□□□ -1.94
UBP8YMR223W AST1P35183 429 aa2.91□□□□□ -1.94
UBP8YMR223W SOR1P35497 357 aaKnown RBP2.91□□□□□ -1.94
UBP8YMR223W DBP7P36120 742 aaKnown RBP2.91□□□□□ -1.94
UBP8YMR223W PRS4P38063 326 aaPredicted RBP2.91□□□□□ -1.94
UBP8YMR223W POP7P38291 140 aa2.91□□□□□ -1.94
UBP8YMR223W VHC1P38329 1120 aa2.91□□□□□ -1.94
UBP8YMR223W SUR2P38992 349 aa2.91□□□□□ -1.94
UBP8YMR223W FHL1P39521 936 aa2.91□□□□□ -1.94
UBP8YMR223W PRM5P40476 318 aa2.91□□□□□ -1.94
UBP8YMR223W SLM1P40485 686 aa2.91□□□□□ -1.94
UBP8YMR223W YKE4P40544 346 aa2.91□□□□□ -1.94
UBP8YMR223W PMT5P52867 743 aa2.91□□□□□ -1.94
UBP8YMR223W RRN9P53437 365 aa2.91□□□□□ -1.94
UBP8YMR223W SSU72P53538 206 aaPredicted RBP2.91□□□□□ -1.94
UBP8YMR223W YIP3P53633 176 aa2.91□□□□□ -1.94
UBP8YMR223W GOR1P53839 350 aa2.91□□□□□ -1.94
UBP8YMR223W SNT309Q06091 175 aaPredicted RBP2.91□□□□□ -1.94
UBP8YMR223W SPO77Q06134 477 aa2.91□□□□□ -1.94
UBP8YMR223W SOR2Q07786 357 aa2.91□□□□□ -1.94
UBP8YMR223W GPM2Q12008 311 aa2.91□□□□□ -1.94
UBP8YMR223W YKL183C-AQ3E765 70 aa2.91□□□□□ -1.94
UBP8YMR223W NCB2Q92317 146 aa2.91□□□□□ -1.94
UBP8YMR223W YDR157WA0A023PZE8 133 aa2.9□□□□□ -1.95
UBP8YMR223W QCR7P00128 127 aa2.9□□□□□ -1.95
UBP8YMR223W OPI3P05375 206 aa2.9□□□□□ -1.95
UBP8YMR223W YLL053CP0CD98 152 aa2.9□□□□□ -1.95
UBP8YMR223W ATP10P18496 279 aa2.9□□□□□ -1.95
UBP8YMR223W STE18P18852 110 aa2.9□□□□□ -1.95
UBP8YMR223W RPO26P20435 155 aa2.9□□□□□ -1.95
UBP8YMR223W PCL1P24867 279 aa2.9□□□□□ -1.95
UBP8YMR223W ZUO1P32527 433 aaKnown RBP2.9□□□□□ -1.95
UBP8YMR223W VPS51P36116 164 aa2.9□□□□□ -1.95
UBP8YMR223W DTR1P38125 572 aa2.9□□□□□ -1.95
UBP8YMR223W RFT1P38206 574 aaPredicted RBP2.9□□□□□ -1.95
UBP8YMR223W OLA1P38219 394 aaKnown RBP2.9□□□□□ -1.95
UBP8YMR223W YMR262WP38430 313 aa2.9□□□□□ -1.95
UBP8YMR223W URA8P38627 578 aaPredicted RBP2.9□□□□□ -1.95
UBP8YMR223W SIM1P40472 476 aa2.9□□□□□ -1.95
UBP8YMR223W SNL1P40548 159 aa2.9□□□□□ -1.95
UBP8YMR223W YIL001WP40560 513 aa2.9□□□□□ -1.95
UBP8YMR223W MRX5P47007 382 aa2.9□□□□□ -1.95
UBP8YMR223W TMA22P47089 198 aaPredicted RBP2.9□□□□□ -1.95
UBP8YMR223W AAD15Q08361 143 aa2.9□□□□□ -1.95
UBP8YMR223W RNH203Q12338 110 aa2.9□□□□□ -1.95
UBP8YMR223W YPR1Q12458 312 aa2.9□□□□□ -1.95
UBP8YMR223W MES1P00958 751 aaKnown RBP2.89□□□□□ -1.95
UBP8YMR223W RAD1P06777 1100 aa2.89□□□□□ -1.95
UBP8YMR223W DSF1P0CX08 502 aa2.89□□□□□ -1.95
UBP8YMR223W YNR073CP0CX09 502 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms