RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C YOR029WQ12243 111 aa1.98□□□□□ -2.09
VTI1YMR197C NCA2Q12374 616 aa1.98□□□□□ -2.09
VTI1YMR197C ERP3Q12403 225 aa1.98□□□□□ -2.09
VTI1YMR197C POM152P39685 1337 aa1.97□□□□□ -2.09
VTI1YMR197C ADH2P00331 348 aaKnown RBP1.97□□□□□ -2.09
VTI1YMR197C TEF1P02994 458 aaKnown RBP1.97□□□□□ -2.09
VTI1YMR197C RAD1P06777 1100 aa1.97□□□□□ -2.09
VTI1YMR197C HEM15P16622 393 aa1.97□□□□□ -2.09
VTI1YMR197C UTR1P21373 530 aa1.97□□□□□ -2.09
VTI1YMR197C OSM1P21375 501 aaKnown RBP1.97□□□□□ -2.09
VTI1YMR197C DAL81P21657 970 aa1.97□□□□□ -2.09
VTI1YMR197C YCR100CP25606 316 aa1.97□□□□□ -2.09
VTI1YMR197C ARO2P28777 376 aaKnown RBP1.97□□□□□ -2.09
VTI1YMR197C ZIP1P31111 875 aa1.97□□□□□ -2.09
VTI1YMR197C TOA2P32774 122 aa1.97□□□□□ -2.09
VTI1YMR197C AIM29P36154 155 aa1.97□□□□□ -2.09
VTI1YMR197C IST2P38250 946 aa1.97□□□□□ -2.09
VTI1YMR197C BIG1P38813 335 aa1.97□□□□□ -2.09
VTI1YMR197C TDA11P38854 504 aa1.97□□□□□ -2.09
VTI1YMR197C YHR182WP38870 785 aa1.97□□□□□ -2.09
VTI1YMR197C RBG1P39729 369 aa1.97□□□□□ -2.09
VTI1YMR197C AGP3P43548 558 aa1.97□□□□□ -2.09
VTI1YMR197C AZR1P50080 613 aa1.97□□□□□ -2.09
VTI1YMR197C LST7P53237 242 aa1.97□□□□□ -2.09
VTI1YMR197C OKP1P53298 406 aa1.97□□□□□ -2.09
VTI1YMR197C RRN9P53437 365 aa1.97□□□□□ -2.09
VTI1YMR197C BIO4P53630 237 aa1.97□□□□□ -2.09
VTI1YMR197C YNR048WP53740 393 aa1.97□□□□□ -2.09
VTI1YMR197C ALG11P53954 548 aaKnown RBP1.97□□□□□ -2.09
VTI1YMR197C SLT2Q00772 484 aa1.97□□□□□ -2.09
VTI1YMR197C SNZ1Q03148 297 aa1.97□□□□□ -2.09
VTI1YMR197C YMR209CQ03648 457 aa1.97□□□□□ -2.09
VTI1YMR197C ENT5Q03769 411 aaKnown RBP1.97□□□□□ -2.09
VTI1YMR197C SMD2Q06217 110 aaKnown RBP1.97□□□□□ -2.09
VTI1YMR197C DIB1Q06819 143 aaPredicted RBP1.97□□□□□ -2.09
VTI1YMR197C PBP4Q07362 185 aaKnown RBP1.97□□□□□ -2.09
VTI1YMR197C PAB1P04147 577 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1 RIP-Chip
VTI1YMR197C MATALPHA1P0CY06 175 aa1.96□□□□□ -2.1
VTI1YMR197C HMLALPHA1P0CY07 175 aa1.96□□□□□ -2.1
VTI1YMR197C MET16P18408 261 aaPredicted RBP1.96□□□□□ -2.1
VTI1YMR197C YPK2P18961 677 aa1.96□□□□□ -2.1
VTI1YMR197C FAR1P21268 830 aa1.96□□□□□ -2.1
VTI1YMR197C RPL24BP24000 155 aaKnown RBP1.96□□□□□ -2.1
VTI1YMR197C DCC1P25559 380 aa1.96□□□□□ -2.1
VTI1YMR197C PBN1P25580 416 aa1.96□□□□□ -2.1
VTI1YMR197C TIP1P27654 210 aaPredicted RBP1.96□□□□□ -2.1
VTI1YMR197C ERG9P29704 444 aa1.96□□□□□ -2.1
VTI1YMR197C ITR2P30606 609 aa1.96□□□□□ -2.1
VTI1YMR197C YEF1P32622 495 aa1.96□□□□□ -2.1
VTI1YMR197C MCR1P36060 302 aaKnown RBP1.96□□□□□ -2.1
VTI1YMR197C ECM4P36156 370 aa1.96□□□□□ -2.1
VTI1YMR197C PRS4P38063 326 aaPredicted RBP1.96□□□□□ -2.1
VTI1YMR197C LDB7P38210 180 aa1.96□□□□□ -2.1
VTI1YMR197C GEP4P38812 185 aa1.96□□□□□ -2.1
VTI1YMR197C ATG7P38862 630 aa1.96□□□□□ -2.1
VTI1YMR197C PFS1P38872 237 aa1.96□□□□□ -2.1
VTI1YMR197C COA1P40452 197 aa1.96□□□□□ -2.1
VTI1YMR197C SIM1P40472 476 aa1.96□□□□□ -2.1
VTI1YMR197C HAM1P47119 197 aaKnown RBP1.96□□□□□ -2.1
VTI1YMR197C EFM5P53200 248 aaKnown RBP1.96□□□□□ -2.1
VTI1YMR197C MKC7P53379 596 aa1.96□□□□□ -2.1
VTI1YMR197C TRM112P53738 135 aaPredicted RBP1.96□□□□□ -2.1
VTI1YMR197C NOP13P53883 403 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
VTI1YMR197C SED5Q01590 340 aa1.96□□□□□ -2.1
VTI1YMR197C YPL080CQ02826 108 aa1.96□□□□□ -2.1
VTI1YMR197C ODC1Q03028 310 aa1.96□□□□□ -2.1
VTI1YMR197C PIR3Q03180 325 aa1.96□□□□□ -2.1
VTI1YMR197C YMR226CQ05016 267 aaKnown RBP1.96□□□□□ -2.1
VTI1YMR197C SDO1Q07953 250 aaKnown RBP1.96□□□□□ -2.1
VTI1YMR197C ESA1Q08649 445 aa1.96□□□□□ -2.1
VTI1YMR197C TIM18Q08749 192 aa1.96□□□□□ -2.1
VTI1YMR197C TPT1Q12272 230 aaKnown RBP1.96□□□□□ -2.1
VTI1YMR197C YDL012CQ12489 107 aa1.96□□□□□ -2.1
VTI1YMR197C ATP6P00854 259 aa1.95□□□□□ -2.1
VTI1YMR197C RHO1P06780 209 aaKnown RBP1.95□□□□□ -2.1
VTI1YMR197C HPR1P17629 752 aaKnown RBP1.95□□□□□ -2.1
VTI1YMR197C ZRC1P20107 442 aa1.95□□□□□ -2.1
VTI1YMR197C RME1P32338 300 aaKnown RBP1.95□□□□□ -2.1
VTI1YMR197C MKK1P32490 508 aa1.95□□□□□ -2.1
VTI1YMR197C MUD1P32605 298 aaKnown RBP1.95□□□□□ -2.1
VTI1YMR197C ZRT1P32804 376 aa1.95□□□□□ -2.1
VTI1YMR197C YHK8P38776 514 aa1.95□□□□□ -2.1
VTI1YMR197C RFC4P40339 323 aaKnown RBP1.95□□□□□ -2.1
VTI1YMR197C REE1P40893 198 aa1.95□□□□□ -2.1
VTI1YMR197C KEG1P43614 200 aa1.95□□□□□ -2.1
VTI1YMR197C SFH5P47008 294 aa1.95□□□□□ -2.1
VTI1YMR197C YJR030CP47101 745 aa1.95□□□□□ -2.1
VTI1YMR197C LIF1P53150 421 aa1.95□□□□□ -2.1
VTI1YMR197C POP6P53218 158 aa1.95□□□□□ -2.1
VTI1YMR197C CAF40P53829 373 aa1.95□□□□□ -2.1
VTI1YMR197C IRC4Q03036 179 aa1.95□□□□□ -2.1
VTI1YMR197C KRE28Q04431 385 aa1.95□□□□□ -2.1
VTI1YMR197C CSM3Q04659 317 aa1.95□□□□□ -2.1
VTI1YMR197C SMC5Q08204 1093 aa1.95□□□□□ -2.1
VTI1YMR197C ALE1Q08548 619 aa1.95□□□□□ -2.1
VTI1YMR197C APC9Q12107 265 aa1.95□□□□□ -2.1
VTI1YMR197C MSH5Q12175 901 aa1.95□□□□□ -2.1
VTI1YMR197C YLR108CQ12259 485 aa1.95□□□□□ -2.1
VTI1YMR197C SEY1Q99287 776 aa1.95□□□□□ -2.1
VTI1YMR197C IZH4Q99393 312 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms