RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W TY1A-DR3Q12441 440 aa3.54□□□□□ -1.84
USA1YML029W MHF1Q3E835 90 aa3.54□□□□□ -1.84
USA1YML029W RPL7AP05737 244 aaKnown RBP3.54□□□□□ -1.84
USA1YML029W TPK3P05986 398 aa3.54□□□□□ -1.84
USA1YML029W CPR3P25719 182 aa3.54□□□□□ -1.84
USA1YML029W PRP19P32523 503 aaKnown RBP3.54□□□□□ -1.84
USA1YML029W PRP21P32524 280 aaPredicted RBP3.54□□□□□ -1.84
USA1YML029W YME2P32843 850 aa3.54□□□□□ -1.84
USA1YML029W NIC96P34077 839 aa3.54□□□□□ -1.84
USA1YML029W TPO5P36029 618 aa3.54□□□□□ -1.84
USA1YML029W MOH1P38191 138 aa3.54□□□□□ -1.84
USA1YML029W ARN2P38724 620 aa3.54□□□□□ -1.84
USA1YML029W RRP4P38792 359 aaKnown RBP3.54□□□□□ -1.84
USA1YML029W GPP2P40106 250 aaKnown RBP3.54□□□□□ -1.84
USA1YML029W YNR040WP53736 256 aa3.54□□□□□ -1.84
USA1YML029W CTL1Q03220 320 aaKnown RBP3.54□□□□□ -1.84
USA1YML029W PRP3Q03338 469 aaPredicted RBP3.54□□□□□ -1.84
USA1YML029W SMP3Q04174 516 aa3.54□□□□□ -1.84
USA1YML029W VPS36Q06696 566 aa3.54□□□□□ -1.84
USA1YML029W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
USA1YML029W RPL7BQ12213 244 aaKnown RBP3.54□□□□□ -1.84
USA1YML029W YPL119C-AQ3E751 87 aa3.54□□□□□ -1.84
USA1YML029W SIR3P06701 978 aa3.53□□□□□ -1.84
USA1YML029W RPC40P07703 335 aaKnown RBP3.53□□□□□ -1.84
USA1YML029W KGD1P20967 1014 aaKnown RBP3.53□□□□□ -1.84
USA1YML029W YCK1P23291 538 aa3.53□□□□□ -1.84
USA1YML029W AHP1P38013 176 aaKnown RBP3.53□□□□□ -1.84
USA1YML029W EGD2P38879 174 aaKnown RBP3.53□□□□□ -1.84
USA1YML029W MSS2P40990 351 aa3.53□□□□□ -1.84
USA1YML029W PBP1P53297 722 aaKnown RBP3.53□□□□□ -1.84
USA1YML029W TMA20P89886 181 aaPredicted RBP3.53□□□□□ -1.84
USA1YML029W YDR209CQ03480 137 aa3.53□□□□□ -1.84
USA1YML029W RSN1Q03516 953 aa3.53□□□□□ -1.84
USA1YML029W MRPL1Q04599 285 aa3.53□□□□□ -1.84
USA1YML029W ENB1Q08299 606 aa3.53□□□□□ -1.84
USA1YML029W RDR1Q08904 546 aa3.53□□□□□ -1.84
USA1YML029W TGS1Q12052 315 aa3.53□□□□□ -1.84
USA1YML029W TMS1Q12116 473 aa3.53□□□□□ -1.84
USA1YML029W SFG1Q12507 346 aa3.53□□□□□ -1.84
USA1YML029W VCX1Q99385 411 aa3.53□□□□□ -1.84
USA1YML029W PHO2P07269 559 aa3.53□□□□□ -1.84
USA1YML029W TY1A-LR4P0C2I8 440 aaKnown RBP3.53□□□□□ -1.84
USA1YML029W TY1A-DR6P0CX70 440 aa3.53□□□□□ -1.84
USA1YML029W TY1A-ER1P0CX71 440 aa3.53□□□□□ -1.84
USA1YML029W TY1A-LR2P0CX72 440 aa3.53□□□□□ -1.84
USA1YML029W TY1A-PLP0CX73 440 aa3.53□□□□□ -1.84
USA1YML029W TY1A-JR1P0CX74 440 aa3.53□□□□□ -1.84
USA1YML029W TY1A-LR3P0CX75 440 aa3.53□□□□□ -1.84
USA1YML029W TY1A-ML2P0CX76 440 aa3.53□□□□□ -1.84
USA1YML029W YHR214C-DP0CX93 97 aa3.53□□□□□ -1.84
USA1YML029W NUP1P20676 1076 aa3.53□□□□□ -1.84
USA1YML029W URE2P23202 354 aaKnown RBP3.53□□□□□ -1.84
USA1YML029W CNA1P23287 553 aa3.53□□□□□ -1.84
USA1YML029W ADH7P25377 361 aa3.53□□□□□ -1.84
USA1YML029W ARC19P33204 171 aaKnown RBP3.53□□□□□ -1.84
USA1YML029W CTF8P38877 133 aa3.53□□□□□ -1.84
USA1YML029W SOP4P39543 234 aaPredicted RBP3.53□□□□□ -1.84
USA1YML029W PZF1P39933 429 aa3.53□□□□□ -1.84
USA1YML029W SLD3P53135 668 aa3.53□□□□□ -1.84
USA1YML029W RPN14P53196 417 aa3.53□□□□□ -1.84
USA1YML029W SYF2P53277 215 aaPredicted RBP3.53□□□□□ -1.84
USA1YML029W MEP3P53390 489 aa3.53□□□□□ -1.84
USA1YML029W SNF12P53628 566 aa3.53□□□□□ -1.84
USA1YML029W YDR541CQ03049 344 aa3.53□□□□□ -1.84
USA1YML029W NUP53Q03790 475 aa3.53□□□□□ -1.84
USA1YML029W PAL1Q05518 499 aaKnown RBP3.53□□□□□ -1.84
USA1YML029W CYK3Q07533 885 aa3.53□□□□□ -1.84
USA1YML029W TY1A-GR1Q12085 440 aa3.53□□□□□ -1.84
USA1YML029W YDL109CQ12103 647 aa3.53□□□□□ -1.84
USA1YML029W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.53□□□□□ -1.84
USA1YML029W TY1A-OLQ92392 440 aaKnown RBP3.53□□□□□ -1.84
USA1YML029W PEP4P07267 405 aaKnown RBP3.52□□□□□ -1.85
USA1YML029W ARF1P11076 181 aaKnown RBP3.52□□□□□ -1.85
USA1YML029W MCM10P32354 571 aa3.52□□□□□ -1.85
USA1YML029W EMP70P32802 667 aa3.52□□□□□ -1.85
USA1YML029W AFR1P33304 620 aa3.52□□□□□ -1.85
USA1YML029W YKL107WP34251 309 aa3.52□□□□□ -1.85
USA1YML029W JEN1P36035 616 aa3.52□□□□□ -1.85
USA1YML029W YKL071WP36086 256 aa3.52□□□□□ -1.85
USA1YML029W CHK1P38147 527 aa3.52□□□□□ -1.85
USA1YML029W YBR138CP38277 524 aa3.52□□□□□ -1.85
USA1YML029W ECM34P38728 170 aa3.52□□□□□ -1.85
USA1YML029W GOS1P38736 223 aa3.52□□□□□ -1.85
USA1YML029W RRF1P38771 230 aa3.52□□□□□ -1.85
USA1YML029W BUR6P40096 142 aa3.52□□□□□ -1.85
USA1YML029W HXT9P40885 567 aa3.52□□□□□ -1.85
USA1YML029W BAP3P41815 604 aa3.52□□□□□ -1.85
USA1YML029W GCN20P43535 752 aaKnown RBP3.52□□□□□ -1.85
USA1YML029W TOS2P50078 622 aa3.52□□□□□ -1.85
USA1YML029W COS10P52924 374 aa3.52□□□□□ -1.85
USA1YML029W MPP6P53725 186 aaPredicted RBP3.52□□□□□ -1.85
USA1YML029W HXT11P54862 567 aa3.52□□□□□ -1.85
USA1YML029W APM1Q00776 475 aaPredicted RBP3.52□□□□□ -1.85
USA1YML029W YPL068CQ02749 293 aa3.52□□□□□ -1.85
USA1YML029W YPL039WQ03080 316 aa3.52□□□□□ -1.85
USA1YML029W CDA2Q06703 312 aa3.52□□□□□ -1.85
USA1YML029W YPL191CQ08930 360 aa3.52□□□□□ -1.85
USA1YML029W YPR071WQ12346 211 aa3.52□□□□□ -1.85
USA1YML029W MED11Q99278 115 aa3.52□□□□□ -1.85
USA1YML029W CSF1Q12150 2958 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms