RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C RSC1P53236 928 aa3.25□□□□□ -1.89
SED5YLR026C YGR067CP53243 804 aa3.25□□□□□ -1.89
SED5YLR026C SRO7Q12038 1033 aa3.25□□□□□ -1.89
SED5YLR026C ERP4Q12450 207 aa3.25□□□□□ -1.89
SED5YLR026C POT1P27796 417 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
SED5YLR026C TPS2P31688 896 aaKnown RBP3.24□□□□□ -1.89
SED5YLR026C YML6P51998 286 aa3.24□□□□□ -1.89
SED5YLR026C RTT102P53330 157 aa3.24□□□□□ -1.89
SED5YLR026C IGO1P53897 168 aa3.24□□□□□ -1.89
SED5YLR026C YMR010WQ03687 405 aa3.24□□□□□ -1.89
SED5YLR026C SFM1Q12314 213 aa3.24□□□□□ -1.89
SED5YLR026C RPP0P05317 312 aaKnown RBP3.23□□□□□ -1.89
SED5YLR026C YBR241CP38142 488 aa3.23□□□□□ -1.89
SED5YLR026C MNL1P38888 796 aa3.23□□□□□ -1.89
SED5YLR026C FSH2Q05015 223 aa3.23□□□□□ -1.89
SED5YLR026C YPR195CQ06594 109 aa3.23□□□□□ -1.89
SED5YLR026C GAT3Q07928 141 aa3.23□□□□□ -1.89
SED5YLR026C ATP16Q12165 160 aa3.23□□□□□ -1.89
SED5YLR026C SEN1Q00416 2231 aaKnown RBP3.23□□□□□ -1.89
SED5YLR026C RIF1P29539 1916 aa3.23□□□□□ -1.89
SED5YLR026C RNA1P11745 407 aaKnown RBP3.22□□□□□ -1.89
SED5YLR026C POX1P13711 748 aa3.22□□□□□ -1.89
SED5YLR026C YDR541CQ03049 344 aa3.22□□□□□ -1.89
SED5YLR026C GYL1Q04322 720 aa3.22□□□□□ -1.89
SED5YLR026C NDL1Q06568 189 aa3.22□□□□□ -1.89
SED5YLR026C YOL085CQ99345 113 aa3.22□□□□□ -1.89
SED5YLR026C SNA3P14359 133 aa3.21□□□□□ -1.9
SED5YLR026C SPP381P38282 291 aaPredicted RBP3.21□□□□□ -1.9
SED5YLR026C ECM34P38728 170 aa3.21□□□□□ -1.9
SED5YLR026C LRP1P38801 184 aaKnown RBP3.21□□□□□ -1.9
SED5YLR026C YHR177WP38867 453 aa3.21□□□□□ -1.9
SED5YLR026C COQ5P49017 307 aa3.21□□□□□ -1.9
SED5YLR026C BIO3P50277 480 aa3.21□□□□□ -1.9
SED5YLR026C HEM4P06174 275 aa3.2□□□□□ -1.9
SED5YLR026C UNG1P12887 359 aa3.2□□□□□ -1.9
SED5YLR026C EPT1P22140 391 aa3.2□□□□□ -1.9
SED5YLR026C RPL16AP26784 199 aaKnown RBP3.2□□□□□ -1.9
SED5YLR026C LDS1P31379 325 aa3.2□□□□□ -1.9
SED5YLR026C PXA2P34230 853 aa3.2□□□□□ -1.9
SED5YLR026C NOP6Q07623 225 aaKnown RBP3.2□□□□□ -1.9
SED5YLR026C FMP27Q06179 2628 aa3.2□□□□□ -1.9
SED5YLR026C SRP72P38688 640 aaKnown RBP3.19□□□□□ -1.9
SED5YLR026C ASN2P49090 572 aaKnown RBP3.19□□□□□ -1.9
SED5YLR026C RNH201P53942 307 aa3.19□□□□□ -1.9
SED5YLR026C RMI1Q02685 241 aa3.19□□□□□ -1.9
SED5YLR026C AAD15Q08361 143 aa3.19□□□□□ -1.9
SED5YLR026C SPE3Q12074 293 aaKnown RBP3.19□□□□□ -1.9
SED5YLR026C YDL109CQ12103 647 aa3.19□□□□□ -1.9
SED5YLR026C SMC6Q12749 1114 aa3.19□□□□□ -1.9
SED5YLR026C RPL40AP0CH08 128 aaKnown RBP3.18□□□□□ -1.9
SED5YLR026C RPL40BP0CH09 128 aaKnown RBP3.18□□□□□ -1.9
SED5YLR026C RPL23AP0CX41 137 aaKnown RBP3.18□□□□□ -1.9
SED5YLR026C RPL23BP0CX42 137 aaKnown RBP3.18□□□□□ -1.9
SED5YLR026C KAP104P38217 918 aaKnown RBP3.18□□□□□ -1.9
SED5YLR026C FRT2P39734 528 aa3.18□□□□□ -1.9
SED5YLR026C RRT13P40042 185 aa3.18□□□□□ -1.9
SED5YLR026C CDH1P53197 566 aa3.18□□□□□ -1.9
SED5YLR026C MRX11Q03079 207 aa3.18□□□□□ -1.9
SED5YLR026C RPN5Q12250 445 aaKnown RBP3.18□□□□□ -1.9
SED5YLR026C LDB17Q12342 491 aa3.18□□□□□ -1.9
SED5YLR026C ERP3Q12403 225 aa3.18□□□□□ -1.9
SED5YLR026C IRA1P18963 3092 aa3.18□□□□□ -1.9
SED5YLR026C ACC1Q00955 2233 aaKnown RBP3.17□□□□□ -1.9
SED5YLR026C PHO88P38264 188 aaPredicted RBP3.17□□□□□ -1.9
SED5YLR026C YGR015CP53208 328 aa3.17□□□□□ -1.9
SED5YLR026C HIF1Q12373 385 aa3.17□□□□□ -1.9
SED5YLR026C RPL1AP0CX43 217 aaKnown RBP3.16□□□□□ -1.9
SED5YLR026C RPL1BP0CX44 217 aaKnown RBP3.16□□□□□ -1.9
SED5YLR026C IME2P32581 645 aa3.16□□□□□ -1.9
SED5YLR026C STB1P42845 420 aa3.16□□□□□ -1.9
SED5YLR026C YMR321CQ04898 105 aa3.16□□□□□ -1.9
SED5YLR026C RPS14AP06367 137 aaKnown RBP3.15□□□□□ -1.91
SED5YLR026C DAL5P15365 543 aa3.15□□□□□ -1.91
SED5YLR026C CYM1P32898 989 aa3.15□□□□□ -1.91
SED5YLR026C COS9P36034 407 aa3.15□□□□□ -1.91
SED5YLR026C TVP23P38962 199 aa3.15□□□□□ -1.91
SED5YLR026C RPS14BP39516 138 aaKnown RBP3.15□□□□□ -1.91
SED5YLR026C EFM4P40516 257 aa3.15□□□□□ -1.91
SED5YLR026C YJR054WP47114 497 aa3.15□□□□□ -1.91
SED5YLR026C CIK1Q01649 594 aa3.15□□□□□ -1.91
SED5YLR026C SPH1Q06160 661 aa3.15□□□□□ -1.91
SED5YLR026C YLH47Q06493 454 aa3.15□□□□□ -1.91
SED5YLR026C DDC1Q08949 612 aa3.15□□□□□ -1.91
SED5YLR026C LAA1P39526 2014 aa3.15□□□□□ -1.91
SED5YLR026C YLR422WQ06409 1932 aa3.15□□□□□ -1.91
SED5YLR026C RRP7P25368 297 aaPredicted RBP3.14□□□□□ -1.91
SED5YLR026C PMT2P31382 759 aa3.14□□□□□ -1.91
SED5YLR026C AGA2P32781 87 aa3.14□□□□□ -1.91
SED5YLR026C SHE1P38200 338 aa3.14□□□□□ -1.91
SED5YLR026C MLH1P38920 769 aa3.14□□□□□ -1.91
SED5YLR026C LCB2P40970 561 aa3.14□□□□□ -1.91
SED5YLR026C CWC22P53333 577 aaKnown RBP3.14□□□□□ -1.91
SED5YLR026C HST4P53688 370 aa3.14□□□□□ -1.91
SED5YLR026C GAS2Q06135 555 aa3.14□□□□□ -1.91
SED5YLR026C IPK1Q06667 281 aa3.14□□□□□ -1.91
SED5YLR026C YDL144CQ07589 356 aa3.14□□□□□ -1.91
SED5YLR026C SPS19P32573 292 aaKnown RBP3.13□□□□□ -1.91
SED5YLR026C DBP7P36120 742 aaKnown RBP3.13□□□□□ -1.91
SED5YLR026C SLT2Q00772 484 aa3.13□□□□□ -1.91
SED5YLR026C CSI1Q04368 295 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 182.8 ms