RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	MMT1	Q03218	510 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	RSN1	Q03516	953 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	MDM30	Q05930	598 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	MED4	Q12343	284 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	SNU23	Q12368	194 aa	Predicted RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	TOR1	P35169	2470 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	TRP1	P00912	224 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	RDS1	P25611	832 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	BUB3	P26449	341 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	YEL045C	P32616	141 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	CAB3	P36076	571 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	PRY2	P36110	329 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
PRP16	YKR086W	OM14	P38325	134 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	SMF1	P38925	575 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	SYG1	P40528	902 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	TFG2	P41896	400 aa	Predicted RBP	0.82	□□□□□ -2.28
PRP16	YKR086W	CUS2	P53830	285 aa	Predicted RBP	0.82	□□□□□ -2.28
PRP16	YKR086W	HER2	Q03557	464 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	CCE1	Q03702	353 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	GPN3	Q06543	272 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	PBP4	Q07362	185 aa	Known RBP	0.82	□□□□□ -2.28
PRP16	YKR086W	NSE1	Q07913	336 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	PLB3	Q08108	686 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	PCL9	Q12477	304 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	MTR10	Q99189	972 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	HIS1	P00498	297 aa	Known RBP	0.82	□□□□□ -2.28
PRP16	YKR086W	ILV5	P06168	395 aa	Known RBP	0.82	□□□□□ -2.28
PRP16	YKR086W	LPD1	P09624	499 aa	Known RBP	0.82	□□□□□ -2.28
PRP16	YKR086W	CKI1	P20485	582 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	IMP1	P28627	190 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	URA10	P30402	227 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	VMA5	P31412	392 aa	Known RBP	0.82	□□□□□ -2.28
PRP16	YKR086W	TPS2	P31688	896 aa	Known RBP	0.82	□□□□□ -2.28
PRP16	YKR086W	HMX1	P32339	317 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
PRP16	YKR086W	YSC83	P32792	385 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	YME2	P32843	850 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	PRS1	P32895	427 aa	Known RBP	0.82	□□□□□ -2.28
PRP16	YKR086W	SPP381	P38282	291 aa	Predicted RBP	0.82	□□□□□ -2.28
PRP16	YKR086W	RFC3	P38629	340 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
PRP16	YKR086W	YPT35	P38815	214 aa	Known RBP	0.82	□□□□□ -2.28
PRP16	YKR086W	YJR012C	P47087	207 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	AIM24	P47127	394 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	PGU1	P47180	361 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	TPN1	P53099	579 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	VOA1	P53262	265 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	SKO1	Q02100	647 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	ROY1	Q04847	553 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	RTC5	Q12108	567 aa	Known RBP	0.82	□□□□□ -2.28
PRP16	YKR086W	NMD4	Q12129	218 aa		0.82	□□□□□ -2.28
PRP16	YKR086W	PRB1	P09232	635 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	ZWF1	P11412	505 aa	Known RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	HEM15	P16622	393 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	CBF1	P17106	351 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	UTH1	P36135	365 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	MRX3	P38172	270 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	PHO89	P38361	574 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	ALP1	P38971	573 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	MRM2	P53123	320 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	SKI8	Q02793	397 aa	Predicted RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	0.81	□□□□□ -2.28	not detected
PRP16	YKR086W	YLR031W	Q07978	186 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	NBL1	Q3E7Y6	73 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	YDR034W-B	Q6Q5X2	51 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	MDN1	Q12019	4910 aa	Known RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	SPS100	P13130	326 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	SEN2	P16658	377 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	SIN4	P32259	974 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	NPL6	P32832	435 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	CSE1	P33307	960 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	WBP1	P33767	430 aa	Known RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	ANR2	P36090	516 aa	Predicted RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	MIX23	P38162	196 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	PGD1	P40356	397 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	MET18	P40469	1032 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	EAF6	P47128	113 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	YGL185C	P53100	379 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	NSA1	P53136	463 aa	Predicted RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	ASI3	P53983	676 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	EGD1	Q02642	157 aa	Known RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	RNY1	Q02933	434 aa	Known RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	RPN9	Q04062	393 aa	Known RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	HSP31	Q04432	237 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	MRD1	Q06106	887 aa	Known RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	VIK1	Q12045	647 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	UTP23	Q12339	254 aa	Known RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	RPL27A	P0C2H6	136 aa	Known RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	RPL27B	P0C2H7	136 aa	Known RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	FPR1	P20081	114 aa	Known RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	CTR86	P25355	563 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	TIP1	P27654	210 aa	Predicted RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	KRE2	P27809	442 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	HXT3	P32466	567 aa	Known RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	MRPL6	P32904	214 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	SDH3	P33421	198 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	KDX1	P36005	433 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	OXA1	P39952	402 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	PRM5	P40476	318 aa		0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms