RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W DHH1P39517 506 aaKnown RBP3.37□□□□□ -1.87
UBP12YJL197W CFD1P40558 293 aa3.37□□□□□ -1.87
UBP12YJL197W POP6P53218 158 aa3.37□□□□□ -1.87
UBP12YJL197W TDA7P53882 636 aaPredicted RBP3.37□□□□□ -1.87
UBP12YJL197W REX2P54964 269 aaKnown RBP3.37□□□□□ -1.87
UBP12YJL197W BSC1Q12140 328 aa3.37□□□□□ -1.87
UBP12YJL197W YBR121C-AP0C5L4 52 aa3.37□□□□□ -1.87
UBP12YJL197W RNQ1P25367 405 aa3.37□□□□□ -1.87
UBP12YJL197W KAR9P32526 644 aa3.37□□□□□ -1.87
UBP12YJL197W MRPL6P32904 214 aa3.37□□□□□ -1.87
UBP12YJL197W VPS52P39904 641 aa3.37□□□□□ -1.87
UBP12YJL197W YPT11P48559 417 aa3.37□□□□□ -1.87
UBP12YJL197W SUN4P53616 420 aa3.37□□□□□ -1.87
UBP12YJL197W ATP23P53722 227 aa3.37□□□□□ -1.87
UBP12YJL197W CCE1Q03702 353 aa3.37□□□□□ -1.87
UBP12YJL197W YLR112WQ12130 139 aa3.37□□□□□ -1.87
UBP12YJL197W SNF8Q12483 233 aa3.37□□□□□ -1.87
UBP12YJL197W CHK1P38147 527 aa3.37□□□□□ -1.87
UBP12YJL197W RPL10P41805 221 aaKnown RBP3.37□□□□□ -1.87
UBP12YJL197W YJR030CP47101 745 aa3.37□□□□□ -1.87
UBP12YJL197W LSG1P53145 640 aaKnown RBP3.37□□□□□ -1.87
UBP12YJL197W CPD1P53314 239 aa3.37□□□□□ -1.87
UBP12YJL197W YDR222WQ04925 415 aa3.37□□□□□ -1.87
UBP12YJL197W CDC123Q05791 360 aa3.37□□□□□ -1.87
UBP12YJL197W MATALPHA2P0CY08 210 aa3.36□□□□□ -1.87
UBP12YJL197W HMLALPHA2P0CY09 210 aa3.36□□□□□ -1.87
UBP12YJL197W APA2P22108 325 aa3.36□□□□□ -1.87
UBP12YJL197W ADE1P27616 306 aa3.36□□□□□ -1.87
UBP12YJL197W ERG28P40030 148 aa3.36□□□□□ -1.87
UBP12YJL197W YIA6P40556 373 aa3.36□□□□□ -1.87
UBP12YJL197W YIL001WP40560 513 aa3.36□□□□□ -1.87
UBP12YJL197W SNO3P43544 222 aa3.36□□□□□ -1.87
UBP12YJL197W SAD1P43589 448 aa3.36□□□□□ -1.87
UBP12YJL197W DIA1P54005 336 aa3.36□□□□□ -1.87
UBP12YJL197W STP1Q00947 519 aa3.36□□□□□ -1.87
UBP12YJL197W ORM2Q06144 216 aa3.36□□□□□ -1.87
UBP12YJL197W YKL183C-AQ3E765 70 aa3.36□□□□□ -1.87
UBP12YJL197W HAT2P39984 401 aa3.36□□□□□ -1.87
UBP12YJL197W ASG7P46993 209 aa3.36□□□□□ -1.87
UBP12YJL197W MST27P53176 234 aa3.36□□□□□ -1.87
UBP12YJL197W GET1P53192 235 aa3.36□□□□□ -1.87
UBP12YJL197W YOR387CQ08910 206 aa3.36□□□□□ -1.87
UBP12YJL197W YRA1Q12159 226 aaKnown RBP3.36□□□□□ -1.87
UBP12YJL197W RAD5P32849 1169 aaPredicted RBP3.36□□□□□ -1.87
UBP12YJL197W SIP2P34164 415 aaKnown RBP3.36□□□□□ -1.87
UBP12YJL197W MIC12P38341 106 aa3.36□□□□□ -1.87
UBP12YJL197W RRT5P43607 289 aa3.36□□□□□ -1.87
UBP12YJL197W COS1P53822 381 aa3.36□□□□□ -1.87
UBP12YJL197W HCH1P53834 153 aa3.36□□□□□ -1.87
UBP12YJL197W PRM6Q04705 352 aa3.36□□□□□ -1.87
UBP12YJL197W MBR1P23493 339 aa3.35□□□□□ -1.87
UBP12YJL197W PTP1P25044 335 aa3.35□□□□□ -1.87
UBP12YJL197W CBT1P36038 271 aaPredicted RBP3.35□□□□□ -1.87
UBP12YJL197W MOH1P38191 138 aa3.35□□□□□ -1.87
UBP12YJL197W URA8P38627 578 aaPredicted RBP3.35□□□□□ -1.87
UBP12YJL197W IDP2P41939 412 aa3.35□□□□□ -1.87
UBP12YJL197W POM33Q12164 279 aa3.35□□□□□ -1.87
UBP12YJL197W MTF1P14908 341 aaKnown RBP3.35□□□□□ -1.87
UBP12YJL197W YMR31P19955 123 aa3.35□□□□□ -1.87
UBP12YJL197W NDC1P32500 655 aa3.35□□□□□ -1.87
UBP12YJL197W SEC72P39742 193 aaKnown RBP3.35□□□□□ -1.87
UBP12YJL197W TES1P41903 349 aaKnown RBP3.35□□□□□ -1.87
UBP12YJL197W QRI1P43123 477 aaKnown RBP3.35□□□□□ -1.87
UBP12YJL197W AVT4P50944 713 aa3.35□□□□□ -1.87
UBP12YJL197W TRM44Q02648 567 aaKnown RBP3.35□□□□□ -1.87
UBP12YJL197W ATG17Q06410 417 aa3.35□□□□□ -1.87
UBP12YJL197W YPL199CQ08954 240 aa3.35□□□□□ -1.87
UBP12YJL197W HEM15P16622 393 aa3.35□□□□□ -1.87
UBP12YJL197W ATO2P32907 282 aa3.35□□□□□ -1.87
UBP12YJL197W MCH2P36032 473 aa3.35□□□□□ -1.87
UBP12YJL197W JLP2P40206 208 aa3.35□□□□□ -1.87
UBP12YJL197W CWC23P52868 283 aaPredicted RBP3.35□□□□□ -1.87
UBP12YJL197W YDR209CQ03480 137 aa3.35□□□□□ -1.87
UBP12YJL197W SNX41Q04053 625 aa3.35□□□□□ -1.87
UBP12YJL197W IRC10Q08118 586 aa3.35□□□□□ -1.87
UBP12YJL197W ILV6P25605 309 aaKnown RBP3.34□□□□□ -1.87
UBP12YJL197W RPL16BP26785 198 aaKnown RBP3.34□□□□□ -1.87
UBP12YJL197W ECM8P38246 354 aa3.34□□□□□ -1.87
UBP12YJL197W SMF2P38778 549 aa3.34□□□□□ -1.87
UBP12YJL197W SHC1P39000 512 aa3.34□□□□□ -1.87
UBP12YJL197W PRE6P40303 254 aaKnown RBP3.34□□□□□ -1.87
UBP12YJL197W GDS1P41913 522 aa3.34□□□□□ -1.87
UBP12YJL197W RDL2Q08742 149 aaKnown RBP3.34□□□□□ -1.87
UBP12YJL197W SME1Q12330 94 aaPredicted RBP3.34□□□□□ -1.87
UBP12YJL197W DNA2P38859 1522 aa3.34□□□□□ -1.87
UBP12YJL197W POX1P13711 748 aa3.34□□□□□ -1.87
UBP12YJL197W PHA2P32452 334 aa3.34□□□□□ -1.87
UBP12YJL197W YIL169CP40442 995 aa3.34□□□□□ -1.87
UBP12YJL197W UBC13P52490 153 aa3.34□□□□□ -1.87
UBP12YJL197W MHR1Q06630 226 aa3.34□□□□□ -1.87
UBP12YJL197W TIP41Q12199 356 aa3.34□□□□□ -1.87
UBP12YJL197W UTP23Q12339 254 aaKnown RBP3.34□□□□□ -1.87
UBP12YJL197W TCP1P12612 559 aaKnown RBP3.34□□□□□ -1.88
UBP12YJL197W NAM9P27929 486 aa3.34□□□□□ -1.88
UBP12YJL197W GDH2P33327 1092 aaKnown RBP3.34□□□□□ -1.88
UBP12YJL197W FRT2P39734 528 aa3.34□□□□□ -1.88
UBP12YJL197W DFG10P40526 253 aa3.34□□□□□ -1.88
UBP12YJL197W ZRG17P53735 605 aa3.34□□□□□ -1.88
UBP12YJL197W DTD1Q07648 150 aaKnown RBP3.34□□□□□ -1.88
UBP12YJL197W DDC1Q08949 612 aa3.34□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms