RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W RCY1P39531 840 aa1.86□□□□□ -2.11
MSL1YIR009W SCC4P40090 624 aa1.86□□□□□ -2.11
MSL1YIR009W MAM33P40513 266 aa1.86□□□□□ -2.11
MSL1YIR009W YNL320WP42840 284 aa1.86□□□□□ -2.11
MSL1YIR009W LOH1P47055 219 aa1.86□□□□□ -2.11
MSL1YIR009W NUP84P52891 726 aa1.86□□□□□ -2.11
MSL1YIR009W HCH1P53834 153 aa1.86□□□□□ -2.11
MSL1YIR009W YNL134CP53912 376 aaKnown RBP1.86□□□□□ -2.11
MSL1YIR009W YMR102CQ03177 834 aa1.86□□□□□ -2.11
MSL1YIR009W ATC1Q04005 294 aa1.86□□□□□ -2.11
MSL1YIR009W RNH1Q04740 348 aa1.86□□□□□ -2.11
MSL1YIR009W ARV1Q06541 321 aa1.86□□□□□ -2.11
MSL1YIR009W BTS1Q12051 335 aa1.86□□□□□ -2.11
MSL1YIR009W SGT2Q12118 346 aaKnown RBP1.86□□□□□ -2.11
MSL1YIR009W LDB17Q12342 491 aa1.86□□□□□ -2.11
MSL1YIR009W PCL9Q12477 304 aa1.86□□□□□ -2.11
MSL1YIR009W GDB1Q06625 1536 aa1.86□□□□□ -2.11
MSL1YIR009W SPS100P13130 326 aa1.85□□□□□ -2.11
MSL1YIR009W PET123P17558 318 aa1.85□□□□□ -2.11
MSL1YIR009W YSR3P23501 404 aa1.85□□□□□ -2.11
MSL1YIR009W RBK1P25332 333 aa1.85□□□□□ -2.11
MSL1YIR009W RPL5P26321 297 aaKnown RBP1.85□□□□□ -2.11
MSL1YIR009W RPL16AP26784 199 aaKnown RBP1.85□□□□□ -2.11
MSL1YIR009W MEI5P32489 222 aa1.85□□□□□ -2.11
MSL1YIR009W KAR9P32526 644 aa1.85□□□□□ -2.11
MSL1YIR009W RPT5P33297 434 aaKnown RBP1.85□□□□□ -2.11
MSL1YIR009W SWD2P36104 329 aaPredicted RBP1.85□□□□□ -2.11
MSL1YIR009W UTH1P36135 365 aa1.85□□□□□ -2.11
MSL1YIR009W PEX32P38292 413 aa1.85□□□□□ -2.11
MSL1YIR009W YCH1P42937 148 aa1.85□□□□□ -2.11
MSL1YIR009W LOC1P43586 204 aaPredicted RBP1.85□□□□□ -2.11
MSL1YIR009W KEL2P50090 882 aa1.85□□□□□ -2.11
MSL1YIR009W SEH1P53011 349 aaKnown RBP1.85□□□□□ -2.11
MSL1YIR009W CWC25P53854 179 aaKnown RBP1.85□□□□□ -2.11
MSL1YIR009W MTQ1P53944 314 aa1.85□□□□□ -2.11
MSL1YIR009W REX2P54964 269 aaKnown RBP1.85□□□□□ -2.11
MSL1YIR009W SPP2Q02521 185 aa1.85□□□□□ -2.11
MSL1YIR009W HRI1Q05905 244 aaKnown RBP1.85□□□□□ -2.11
MSL1YIR009W YPR091CQ06833 770 aa1.85□□□□□ -2.11
MSL1YIR009W LOT6Q07923 191 aa1.85□□□□□ -2.11
MSL1YIR009W SMC5Q08204 1093 aa1.85□□□□□ -2.11
MSL1YIR009W DDC1Q08949 612 aa1.85□□□□□ -2.11
MSL1YIR009W FCY22Q12119 530 aa1.85□□□□□ -2.11
MSL1YIR009W SIA1Q12212 622 aa1.85□□□□□ -2.11
MSL1YIR009W PRP46Q12417 451 aaPredicted RBP1.85□□□□□ -2.11
MSL1YIR009W UBA3Q99344 299 aa1.85□□□□□ -2.11
MSL1YIR009W MYO4P32492 1471 aa1.85□□□□□ -2.11
MSL1YIR009W SSK22P25390 1331 aaPredicted RBP1.85□□□□□ -2.11
MSL1YIR009W CFT1Q06632 1357 aaKnown RBP1.85□□□□□ -2.11
MSL1YIR009W RPL24AP04449 155 aaKnown RBP1.84□□□□□ -2.11
MSL1YIR009W RSR1P13856 272 aa1.84□□□□□ -2.11
MSL1YIR009W VPS1P21576 704 aaKnown RBP1.84□□□□□ -2.11
MSL1YIR009W IMP3P32899 183 aaPredicted RBP1.84□□□□□ -2.11
MSL1YIR009W SPO23P33757 523 aa1.84□□□□□ -2.11
MSL1YIR009W HIS2P38635 335 aa1.84□□□□□ -2.11
MSL1YIR009W YHR045WP38775 560 aa1.84□□□□□ -2.11
MSL1YIR009W PAN6P40459 309 aa1.84□□□□□ -2.11
MSL1YIR009W BNA6P43619 295 aa1.84□□□□□ -2.11
MSL1YIR009W LIA1P47120 325 aaKnown RBP1.84□□□□□ -2.11
MSL1YIR009W YJR085CP47131 105 aaKnown RBP1.84□□□□□ -2.11
MSL1YIR009W IRC4Q03036 179 aa1.84□□□□□ -2.11
MSL1YIR009W PRM6Q04705 352 aa1.84□□□□□ -2.11
MSL1YIR009W COX20Q04935 205 aa1.84□□□□□ -2.11
MSL1YIR009W YDL109CQ12103 647 aa1.84□□□□□ -2.11
MSL1YIR009W POM33Q12164 279 aa1.84□□□□□ -2.11
MSL1YIR009W YGK3Q12222 375 aaPredicted RBP1.84□□□□□ -2.11
MSL1YIR009W WTM1Q12363 437 aaKnown RBP1.84□□□□□ -2.11
MSL1YIR009W PDR10P51533 1564 aa1.84□□□□□ -2.12
MSL1YIR009W XRN1P22147 1528 aaKnown RBP1.83□□□□□ -2.12
MSL1YIR009W TDH3P00359 332 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
MSL1YIR009W RPS8AP0CX39 200 aaKnown RBP1.83□□□□□ -2.12
MSL1YIR009W RPS8BP0CX40 200 aaKnown RBP1.83□□□□□ -2.12
MSL1YIR009W RPL23AP0CX41 137 aaKnown RBP1.83□□□□□ -2.12
MSL1YIR009W RPL23BP0CX42 137 aaKnown RBP1.83□□□□□ -2.12
MSL1YIR009W ERD1P16151 362 aa1.83□□□□□ -2.12
MSL1YIR009W PCL1P24867 279 aa1.83□□□□□ -2.12
MSL1YIR009W ERG9P29704 444 aa1.83□□□□□ -2.12
MSL1YIR009W SKG6P32900 734 aaPredicted RBP1.83□□□□□ -2.12
MSL1YIR009W CSE2P33308 149 aa1.83□□□□□ -2.12
MSL1YIR009W COY1P34237 679 aa1.83□□□□□ -2.12
MSL1YIR009W YKR015CP36111 568 aa1.83□□□□□ -2.12
MSL1YIR009W MRP21P38175 177 aa1.83□□□□□ -2.12
MSL1YIR009W WSC4P38739 605 aa1.83□□□□□ -2.12
MSL1YIR009W YAP3P38749 330 aa1.83□□□□□ -2.12
MSL1YIR009W TDA11P38854 504 aa1.83□□□□□ -2.12
MSL1YIR009W SPT8P38915 602 aa1.83□□□□□ -2.12
MSL1YIR009W PEX22P39718 180 aa1.83□□□□□ -2.12
MSL1YIR009W YNL208WP40159 199 aaKnown RBP1.83□□□□□ -2.12
MSL1YIR009W SLM1P40485 686 aa1.83□□□□□ -2.12
MSL1YIR009W INA22P40576 216 aa1.83□□□□□ -2.12
MSL1YIR009W CDC40P40968 455 aaPredicted RBP1.83□□□□□ -2.12
MSL1YIR009W EGT2P42835 1041 aa1.83□□□□□ -2.12
MSL1YIR009W FMP33P46998 180 aa1.83□□□□□ -2.12
MSL1YIR009W COX16P47081 118 aa1.83□□□□□ -2.12
MSL1YIR009W LSG1P53145 640 aaKnown RBP1.83□□□□□ -2.12
MSL1YIR009W LSB1P53281 241 aa1.83□□□□□ -2.12
MSL1YIR009W MTM1P53320 366 aa1.83□□□□□ -2.12
MSL1YIR009W SED5Q01590 340 aa1.83□□□□□ -2.12
MSL1YIR009W HAL1Q01766 294 aa1.83□□□□□ -2.12
MSL1YIR009W RTN1Q04947 295 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 111.3 ms