RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C SPO24Q3E752 67 aa2.25□□□□□ -2.05
PRP38YGR075C DNF1P32660 1571 aa2.24□□□□□ -2.05
PRP38YGR075C CDC37P06101 506 aaKnown RBP2.24□□□□□ -2.05
PRP38YGR075C HEM4P06174 275 aa2.24□□□□□ -2.05
PRP38YGR075C RAD1P06777 1100 aa2.24□□□□□ -2.05
PRP38YGR075C YLL053CP0CD98 152 aa2.24□□□□□ -2.05
PRP38YGR075C RPL23AP0CX41 137 aaKnown RBP2.24□□□□□ -2.05
PRP38YGR075C RPL23BP0CX42 137 aaKnown RBP2.24□□□□□ -2.05
PRP38YGR075C GAL3P13045 520 aa2.24□□□□□ -2.05
PRP38YGR075C UTR1P21373 530 aa2.24□□□□□ -2.05
PRP38YGR075C ERG9P29704 444 aa2.24□□□□□ -2.05
PRP38YGR075C SPS19P32573 292 aaKnown RBP2.24□□□□□ -2.05
PRP38YGR075C AST1P35183 429 aa2.24□□□□□ -2.05
PRP38YGR075C PCH2P38126 564 aa2.24□□□□□ -2.05
PRP38YGR075C YPT35P38815 214 aaKnown RBP2.24□□□□□ -2.05
PRP38YGR075C TRR2P38816 342 aa2.24□□□□□ -2.05
PRP38YGR075C BTT1P40314 149 aaPredicted RBP2.24□□□□□ -2.05
PRP38YGR075C YIR035CP40579 254 aa2.24□□□□□ -2.05
PRP38YGR075C YJR030CP47101 745 aa2.24□□□□□ -2.05
PRP38YGR075C CWC22P53333 577 aaKnown RBP2.24□□□□□ -2.05
PRP38YGR075C MRX11Q03079 207 aa2.24□□□□□ -2.05
PRP38YGR075C CSM3Q04659 317 aa2.24□□□□□ -2.05
PRP38YGR075C SLM3Q12093 417 aa2.24□□□□□ -2.05
PRP38YGR075C YAL067W-AQ8TGK6 75 aa2.24□□□□□ -2.05
PRP38YGR075C RGS2Q99188 309 aa2.24□□□□□ -2.05
PRP38YGR075C UBA3Q99344 299 aa2.24□□□□□ -2.05
PRP38YGR075C CBP2P03874 630 aaPredicted RBP2.23□□□□□ -2.05
PRP38YGR075C PET18P25362 215 aa2.23□□□□□ -2.05
PRP38YGR075C CIN8P27895 1000 aa2.23□□□□□ -2.05
PRP38YGR075C ZIP1P31111 875 aa2.23□□□□□ -2.05
PRP38YGR075C PES4P39684 611 aa2.23□□□□□ -2.05
PRP38YGR075C SSO2P39926 295 aa2.23□□□□□ -2.05
PRP38YGR075C OSW5P40219 148 aa2.23□□□□□ -2.05
PRP38YGR075C YCH1P42937 148 aa2.23□□□□□ -2.05
PRP38YGR075C YJR054WP47114 497 aa2.23□□□□□ -2.05
PRP38YGR075C CDH1P53197 566 aa2.23□□□□□ -2.05
PRP38YGR075C HRT1Q08273 121 aa2.23□□□□□ -2.05
PRP38YGR075C ALE1Q08548 619 aa2.23□□□□□ -2.05
PRP38YGR075C TCB3Q03640 1545 aaKnown RBP2.22□□□□□ -2.05
PRP38YGR075C VPS63O13549 108 aa2.22□□□□□ -2.05
PRP38YGR075C MSS116P15424 664 aaKnown RBP2.22□□□□□ -2.05
PRP38YGR075C FUS3P16892 353 aaKnown RBP2.22□□□□□ -2.05
PRP38YGR075C MIR1P23641 311 aaKnown RBP2.22□□□□□ -2.05
PRP38YGR075C DCC1P25559 380 aa2.22□□□□□ -2.05
PRP38YGR075C MKK1P32490 508 aa2.22□□□□□ -2.05
PRP38YGR075C CBF5P33322 483 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
PRP38YGR075C RRF1P38771 230 aa2.22□□□□□ -2.05
PRP38YGR075C AIM20P40451 204 aa2.22□□□□□ -2.05
PRP38YGR075C NAS6P50086 228 aa2.22□□□□□ -2.05
PRP38YGR075C LSG1P53145 640 aaKnown RBP2.22□□□□□ -2.05
PRP38YGR075C TRM82Q03774 444 aa2.22□□□□□ -2.05
PRP38YGR075C MRX8Q05473 314 aa2.22□□□□□ -2.05
PRP38YGR075C MDY2Q12285 212 aa2.22□□□□□ -2.05
PRP38YGR075C MDS3P53094 1487 aa2.21□□□□□ -2.06
PRP38YGR075C LTE1P07866 1435 aa2.21□□□□□ -2.06
PRP38YGR075C GCD2P12754 651 aaPredicted RBP2.21□□□□□ -2.06
PRP38YGR075C MYO2P19524 1574 aaKnown RBP2.21□□□□□ -2.06
PRP38YGR075C PMT2P31382 759 aa2.21□□□□□ -2.06
PRP38YGR075C MYO3P36006 1272 aa2.21□□□□□ -2.06
PRP38YGR075C COS9P36034 407 aa2.21□□□□□ -2.06
PRP38YGR075C IML3P38265 245 aa2.21□□□□□ -2.06
PRP38YGR075C MMS21P38632 267 aa2.21□□□□□ -2.06
PRP38YGR075C LOC1P43586 204 aaPredicted RBP2.21□□□□□ -2.06
PRP38YGR075C TAF6P53040 516 aa2.21□□□□□ -2.06
PRP38YGR075C SED5Q01590 340 aa2.21□□□□□ -2.06
PRP38YGR075C ABZ2Q03266 374 aa2.21□□□□□ -2.06
PRP38YGR075C INP2Q03824 705 aa2.21□□□□□ -2.06
PRP38YGR075C IRC20Q06554 1556 aa2.21□□□□□ -2.06
PRP38YGR075C FRE8Q12209 686 aa2.21□□□□□ -2.06
PRP38YGR075C PEP1P32319 1579 aa2.2□□□□□ -2.06
PRP38YGR075C YPS1P32329 569 aa2.2□□□□□ -2.06
PRP38YGR075C RPS0AP32905 252 aaKnown RBP2.2□□□□□ -2.06
PRP38YGR075C STB1P42845 420 aa2.2□□□□□ -2.06
PRP38YGR075C COS4P43542 379 aa2.2□□□□□ -2.06
PRP38YGR075C SUR7P54003 302 aa2.2□□□□□ -2.06
PRP38YGR075C RVB1Q03940 463 aaKnown RBP2.2□□□□□ -2.06
PRP38YGR075C CAB5Q03941 241 aa2.2□□□□□ -2.06
PRP38YGR075C API2Q04413 109 aa2.2□□□□□ -2.06
PRP38YGR075C YLR297WQ05899 129 aa2.2□□□□□ -2.06
PRP38YGR075C RPN6Q12377 434 aa2.2□□□□□ -2.06
PRP38YGR075C FLO11P08640 1367 aa2.2□□□□□ -2.06
PRP38YGR075C RPL18AP0CX49 186 aaKnown RBP2.19□□□□□ -2.06
PRP38YGR075C RPL18BP0CX50 186 aaKnown RBP2.19□□□□□ -2.06
PRP38YGR075C RBK1P25332 333 aa2.19□□□□□ -2.06
PRP38YGR075C VMA5P31412 392 aaKnown RBP2.19□□□□□ -2.06
PRP38YGR075C ACB1P31787 87 aa2.19□□□□□ -2.06
PRP38YGR075C SWC5P38326 303 aa2.19□□□□□ -2.06
PRP38YGR075C END3P39013 349 aa2.19□□□□□ -2.06
PRP38YGR075C MNN9P39107 395 aaKnown RBP2.19□□□□□ -2.06
PRP38YGR075C UTP25P40498 721 aaKnown RBP2.19□□□□□ -2.06
PRP38YGR075C INA22P40576 216 aa2.19□□□□□ -2.06
PRP38YGR075C YNL320WP42840 284 aa2.19□□□□□ -2.06
PRP38YGR075C MOB2P43563 287 aa2.19□□□□□ -2.06
PRP38YGR075C YFR018CP43599 363 aa2.19□□□□□ -2.06
PRP38YGR075C AIM23P47015 356 aa2.19□□□□□ -2.06
PRP38YGR075C PXR1P53335 271 aaPredicted RBP2.19□□□□□ -2.06
PRP38YGR075C BUR2Q05949 395 aa2.19□□□□□ -2.06
PRP38YGR075C GAS2Q06135 555 aa2.19□□□□□ -2.06
PRP38YGR075C CUR1Q06469 252 aa2.19□□□□□ -2.06
PRP38YGR075C BPT1P14772 1559 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms