RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W SIP4P46954 829 aa7.54□□□□□ -1.2
UFD1YGR048W NET1P47035 1189 aa7.54□□□□□ -1.2
UFD1YGR048W SDT1P53078 280 aa7.54□□□□□ -1.2
UFD1YGR048W YGL185CP53100 379 aa7.54□□□□□ -1.2
UFD1YGR048W BUD9P53226 547 aa7.54□□□□□ -1.2
UFD1YGR048W VOA1P53262 265 aa7.54□□□□□ -1.2
UFD1YGR048W ALG12P53730 551 aa7.54□□□□□ -1.2
UFD1YGR048W MSS11Q03825 758 aa7.54□□□□□ -1.2
UFD1YGR048W VBA1Q04301 562 aa7.54□□□□□ -1.2
UFD1YGR048W SKG3Q06315 1026 aa7.54□□□□□ -1.2
UFD1YGR048W FRQ1Q06389 190 aa7.54□□□□□ -1.2
UFD1YGR048W YPL272CQ08984 517 aa7.54□□□□□ -1.2
UFD1YGR048W RTK1Q12100 620 aaPredicted RBP7.54□□□□□ -1.2
UFD1YGR048W YLR049CQ12110 428 aa7.54□□□□□ -1.2
UFD1YGR048W RRP42Q12277 265 aaPredicted RBP7.54□□□□□ -1.2
UFD1YGR048W RMD5Q12508 421 aa7.54□□□□□ -1.2
UFD1YGR048W SIR2P06700 562 aa7.53□□□□□ -1.2
UFD1YGR048W ATP5P09457 212 aa7.53□□□□□ -1.2
UFD1YGR048W YPK1P12688 680 aaKnown RBP7.53□□□□□ -1.2
UFD1YGR048W ERD2P18414 219 aa7.53□□□□□ -1.2
UFD1YGR048W PRE1P22141 198 aaKnown RBP7.53□□□□□ -1.2
UFD1YGR048W TRX2P22803 104 aaKnown RBP7.53□□□□□ -1.2
UFD1YGR048W MRP20P32387 263 aa7.53□□□□□ -1.2
UFD1YGR048W RPD3P32561 433 aa7.53□□□□□ -1.2
UFD1YGR048W VPH1P32563 840 aaKnown RBP7.53□□□□□ -1.2
UFD1YGR048W YMC2P38087 329 aa7.53□□□□□ -1.2
UFD1YGR048W NPR2P39923 615 aa7.53□□□□□ -1.2
UFD1YGR048W MMF1P40185 145 aaKnown RBP7.53□□□□□ -1.2
UFD1YGR048W FIS1P40515 155 aa7.53□□□□□ -1.2
UFD1YGR048W VMA21P41806 77 aa7.53□□□□□ -1.2
UFD1YGR048W GLC8P41818 229 aa7.53□□□□□ -1.2
UFD1YGR048W SPO74P45819 413 aa7.53□□□□□ -1.2
UFD1YGR048W SYF2P53277 215 aaPredicted RBP7.53□□□□□ -1.2
UFD1YGR048W SAY1P53324 424 aa7.53□□□□□ -1.2
UFD1YGR048W MPA43P53583 542 aaPredicted RBP7.53□□□□□ -1.2
UFD1YGR048W FMP41P53889 259 aaKnown RBP7.53□□□□□ -1.2
UFD1YGR048W GIP3Q03016 1276 aa7.53□□□□□ -1.2
UFD1YGR048W YMR087WQ04299 284 aa7.53□□□□□ -1.2
UFD1YGR048W RTT103Q05543 409 aa7.53□□□□□ -1.2
UFD1YGR048W GRC3Q07845 632 aa7.53□□□□□ -1.2
UFD1YGR048W RFU1Q08003 200 aa7.53□□□□□ -1.2
UFD1YGR048W MRX4Q12467 430 aa7.53□□□□□ -1.2
UFD1YGR048W SKS1Q12505 502 aa7.53□□□□□ -1.2
UFD1YGR048W YDL085C-AQ3E7B7 68 aaKnown RBP7.53□□□□□ -1.2
UFD1YGR048W RPL4AP10664 362 aaKnown RBP7.52□□□□□ -1.21
UFD1YGR048W TFS1P14306 219 aa7.52□□□□□ -1.21
UFD1YGR048W SRM1P21827 482 aa7.52□□□□□ -1.21
UFD1YGR048W RFA1P22336 621 aaKnown RBP7.52□□□□□ -1.21
UFD1YGR048W NAR1P23503 491 aaKnown RBP7.52□□□□□ -1.21
UFD1YGR048W AAT2P23542 418 aaKnown RBP7.52□□□□□ -1.21
UFD1YGR048W PRE8P23639 250 aa7.52□□□□□ -1.21
UFD1YGR048W YCP4P25349 247 aaKnown RBP7.52□□□□□ -1.21
UFD1YGR048W AHC2P25649 128 aa7.52□□□□□ -1.21
UFD1YGR048W COQ3P27680 312 aa7.52□□□□□ -1.21
UFD1YGR048W COS9P36034 407 aa7.52□□□□□ -1.21
UFD1YGR048W DOA1P36037 715 aa7.52□□□□□ -1.21
UFD1YGR048W MRPL28P36527 147 aa7.52□□□□□ -1.21
UFD1YGR048W POA1P38218 177 aa7.52□□□□□ -1.21
UFD1YGR048W RTC2P38279 296 aa7.52□□□□□ -1.21
UFD1YGR048W AYR1P40471 297 aa7.52□□□□□ -1.21
UFD1YGR048W AGX1P43567 385 aa7.52□□□□□ -1.21
UFD1YGR048W RPL4BP49626 362 aaKnown RBP7.52□□□□□ -1.21
UFD1YGR048W YGR012WP53206 393 aa7.52□□□□□ -1.21
UFD1YGR048W MTL1P53214 551 aa7.52□□□□□ -1.21
UFD1YGR048W COQ6P53318 479 aa7.52□□□□□ -1.21
UFD1YGR048W BRE5P53741 515 aaKnown RBP7.52□□□□□ -1.21
UFD1YGR048W APM1Q00776 475 aaPredicted RBP7.52□□□□□ -1.21
UFD1YGR048W YDC1Q02896 317 aa7.52□□□□□ -1.21
UFD1YGR048W TRS31Q03337 283 aa7.52□□□□□ -1.21
UFD1YGR048W TY1A-DR2Q03964 440 aaKnown RBP7.52□□□□□ -1.21
UFD1YGR048W ATC1Q04005 294 aa7.52□□□□□ -1.21
UFD1YGR048W RRI1Q12468 440 aa7.52□□□□□ -1.21
UFD1YGR048W HEM2P05373 342 aa7.51□□□□□ -1.21
UFD1YGR048W DFR1P07807 211 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
UFD1YGR048W ERG20P08524 352 aaKnown RBP7.51□□□□□ -1.21
UFD1YGR048W SAM1P10659 382 aaKnown RBP7.51□□□□□ -1.21
UFD1YGR048W SEC12P11655 471 aa7.51□□□□□ -1.21
UFD1YGR048W CPR4P25334 318 aa7.51□□□□□ -1.21
UFD1YGR048W ARE1P25628 610 aa7.51□□□□□ -1.21
UFD1YGR048W ADE1P27616 306 aa7.51□□□□□ -1.21
UFD1YGR048W OAC1P32332 324 aa7.51□□□□□ -1.21
UFD1YGR048W CLB6P32943 380 aa7.51□□□□□ -1.21
UFD1YGR048W TSA1P34760 196 aaKnown RBP7.51□□□□□ -1.21
UFD1YGR048W TSL1P38427 1098 aaKnown RBP7.51□□□□□ -1.21
UFD1YGR048W UBA4P38820 440 aa7.51□□□□□ -1.21
UFD1YGR048W SNM1P40993 198 aa7.51□□□□□ -1.21
UFD1YGR048W AIM25P47140 327 aa7.51□□□□□ -1.21
UFD1YGR048W YJR149WP47177 404 aa7.51□□□□□ -1.21
UFD1YGR048W TIM21P53220 239 aa7.51□□□□□ -1.21
UFD1YGR048W RPT4P53549 437 aaKnown RBP7.51□□□□□ -1.21
UFD1YGR048W MRP51Q02950 344 aa7.51□□□□□ -1.21
UFD1YGR048W CTL1Q03220 320 aaKnown RBP7.51□□□□□ -1.21
UFD1YGR048W EMI1Q04406 187 aa7.51□□□□□ -1.21
UFD1YGR048W SWC7Q06707 132 aa7.51□□□□□ -1.21
UFD1YGR048W PUN1Q06991 263 aa7.51□□□□□ -1.21
UFD1YGR048W GPB1Q08886 897 aa7.51□□□□□ -1.21
UFD1YGR048W FDH1Q08911 376 aa7.51□□□□□ -1.21
UFD1YGR048W GPM2Q12008 311 aa7.51□□□□□ -1.21
UFD1YGR048W NBP2Q12163 236 aa7.51□□□□□ -1.21
UFD1YGR048W RDI1Q12434 202 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 84.2 ms