RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W VAB2P40003 282 aa3.07□□□□□ -1.92
USE1YGL098W SPO73P40031 143 aa3.07□□□□□ -1.92
USE1YGL098W GAT2P40209 560 aa3.07□□□□□ -1.92
USE1YGL098W HXT14P42833 540 aa3.07□□□□□ -1.92
USE1YGL098W PTR3P43606 678 aa3.07□□□□□ -1.92
USE1YGL098W SNG1P46950 547 aa3.07□□□□□ -1.92
USE1YGL098W NIT2P47016 307 aa3.07□□□□□ -1.92
USE1YGL098W TAD2P47058 250 aa3.07□□□□□ -1.92
USE1YGL098W AIM25P47140 327 aa3.07□□□□□ -1.92
USE1YGL098W ASK10P48361 1146 aa3.07□□□□□ -1.92
USE1YGL098W NUP57P48837 541 aa3.07□□□□□ -1.92
USE1YGL098W YGL159WP53110 370 aa3.07□□□□□ -1.92
USE1YGL098W MPC1P53157 130 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W PRM8P53174 237 aa3.07□□□□□ -1.92
USE1YGL098W SLX9P53251 210 aaPredicted RBP3.07□□□□□ -1.92
USE1YGL098W SYF2P53277 215 aaPredicted RBP3.07□□□□□ -1.92
USE1YGL098W TNA1P53322 534 aa3.07□□□□□ -1.92
USE1YGL098W SAY1P53324 424 aa3.07□□□□□ -1.92
USE1YGL098W RNH70P53331 553 aa3.07□□□□□ -1.92
USE1YGL098W HOL1P53389 586 aa3.07□□□□□ -1.92
USE1YGL098W YPR003CP53394 754 aa3.07□□□□□ -1.92
USE1YGL098W MPA43P53583 542 aaPredicted RBP3.07□□□□□ -1.92
USE1YGL098W CDC55Q00362 526 aa3.07□□□□□ -1.92
USE1YGL098W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
USE1YGL098W TRM44Q02648 567 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W SNO1Q03144 224 aa3.07□□□□□ -1.92
USE1YGL098W TRS31Q03337 283 aa3.07□□□□□ -1.92
USE1YGL098W DIG2Q03373 323 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W TVP18Q04767 167 aa3.07□□□□□ -1.92
USE1YGL098W RTN1Q04947 295 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W YHC1Q05900 231 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W DCR2Q05924 578 aa3.07□□□□□ -1.92
USE1YGL098W TMA10Q06177 86 aa3.07□□□□□ -1.92
USE1YGL098W YLR455WQ06188 304 aa3.07□□□□□ -1.92
USE1YGL098W TPO3Q06451 622 aa3.07□□□□□ -1.92
USE1YGL098W AIM6Q07716 390 aa3.07□□□□□ -1.92
USE1YGL098W RFU1Q08003 200 aa3.07□□□□□ -1.92
USE1YGL098W RRT8Q08219 342 aa3.07□□□□□ -1.92
USE1YGL098W THP1Q08231 455 aa3.07□□□□□ -1.92
USE1YGL098W YPL245WQ12179 454 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W TY1A-NL1Q12391 440 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W RDI1Q12434 202 aa3.07□□□□□ -1.92
USE1YGL098W RRI1Q12468 440 aa3.07□□□□□ -1.92
USE1YGL098W PRM4Q12498 284 aa3.07□□□□□ -1.92
USE1YGL098W PCD1Q12524 340 aa3.07□□□□□ -1.92
USE1YGL098W Q0144Q9ZZW2 109 aa3.07□□□□□ -1.92
USE1YGL098W YEL009C-AA0A023PZF2 135 aa3.06□□□□□ -1.92
USE1YGL098W COX5BP00425 151 aa3.06□□□□□ -1.92
USE1YGL098W HXK2P04807 486 aaKnown RBP3.06□□□□□ -1.92
USE1YGL098W HEM2P05373 342 aa3.06□□□□□ -1.92
USE1YGL098W DST1P07273 309 aa3.06□□□□□ -1.92
USE1YGL098W SAM1P10659 382 aaKnown RBP3.06□□□□□ -1.92
USE1YGL098W CDC34P14682 295 aa3.06□□□□□ -1.92
USE1YGL098W SAM35P14693 329 aa3.06□□□□□ -1.92
USE1YGL098W RPB3P16370 318 aaKnown RBP3.06□□□□□ -1.92
USE1YGL098W STE4P18851 423 aa3.06□□□□□ -1.92
USE1YGL098W HOP1P20050 605 aa3.06□□□□□ -1.92
USE1YGL098W EPT1P22140 391 aa3.06□□□□□ -1.92
USE1YGL098W YCP4P25349 247 aaKnown RBP3.06□□□□□ -1.92
USE1YGL098W RRP7P25368 297 aaPredicted RBP3.06□□□□□ -1.92
USE1YGL098W AGP1P25376 633 aa3.06□□□□□ -1.92
USE1YGL098W GID7P25569 745 aa3.06□□□□□ -1.92
USE1YGL098W PBN1P25580 416 aa3.06□□□□□ -1.92
USE1YGL098W ARE1P25628 610 aa3.06□□□□□ -1.92
USE1YGL098W YCR099CP25657 155 aa3.06□□□□□ -1.92
USE1YGL098W ADE1P27616 306 aa3.06□□□□□ -1.92
USE1YGL098W TCA17P32613 152 aa3.06□□□□□ -1.92
USE1YGL098W TMT1P32643 299 aa3.06□□□□□ -1.92
USE1YGL098W YSC83P32792 385 aa3.06□□□□□ -1.92
USE1YGL098W SDH3P33421 198 aa3.06□□□□□ -1.92
USE1YGL098W YKL075CP36083 450 aa3.06□□□□□ -1.92
USE1YGL098W GMH1P36125 273 aa3.06□□□□□ -1.92
USE1YGL098W MRPL28P36527 147 aa3.06□□□□□ -1.92
USE1YGL098W YBR013CP38215 129 aa3.06□□□□□ -1.92
USE1YGL098W HSL7P38274 827 aa3.06□□□□□ -1.92
USE1YGL098W MUP3P38734 546 aa3.06□□□□□ -1.92
USE1YGL098W PEX28P38848 579 aa3.06□□□□□ -1.92
USE1YGL098W ASP1P38986 381 aaPredicted RBP3.06□□□□□ -1.92
USE1YGL098W POP2P39008 433 aa3.06□□□□□ -1.92
USE1YGL098W PRM9P39551 298 aa3.06□□□□□ -1.92
USE1YGL098W GCV3P39726 170 aaPredicted RBP3.06□□□□□ -1.92
USE1YGL098W FIR1P40020 876 aa3.06□□□□□ -1.92
USE1YGL098W YIL165CP40446 119 aa3.06□□□□□ -1.92
USE1YGL098W NEO1P40527 1151 aa3.06□□□□□ -1.92
USE1YGL098W VMA21P41806 77 aa3.06□□□□□ -1.92
USE1YGL098W YFL012WP43580 148 aa3.06□□□□□ -1.92
USE1YGL098W SIP4P46954 829 aa3.06□□□□□ -1.92
USE1YGL098W YJR011CP47086 261 aaPredicted RBP3.06□□□□□ -1.92
USE1YGL098W YJR056CP47115 236 aa3.06□□□□□ -1.92
USE1YGL098W HMS2P47175 358 aa3.06□□□□□ -1.92
USE1YGL098W MRX6P48564 524 aa3.06□□□□□ -1.92
USE1YGL098W AMA1P50082 593 aa3.06□□□□□ -1.92
USE1YGL098W COG7P53195 279 aa3.06□□□□□ -1.92
USE1YGL098W TIM21P53220 239 aa3.06□□□□□ -1.92
USE1YGL098W NRK1P53915 240 aa3.06□□□□□ -1.92
USE1YGL098W YDR366CP87287 132 aa3.06□□□□□ -1.92
USE1YGL098W RSM10Q03201 203 aa3.06□□□□□ -1.92
USE1YGL098W CTL1Q03220 320 aaKnown RBP3.06□□□□□ -1.92
USE1YGL098W OYE2Q03558 400 aaKnown RBP3.06□□□□□ -1.92
USE1YGL098W YMR160WQ03823 816 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms