RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W RFM1Q12192 310 aa0.95□□□□□ -2.26
SMC1YFL008W RIO1Q12196 484 aaKnown RBP0.95□□□□□ -2.26
SMC1YFL008W RUP1Q12242 671 aa0.95□□□□□ -2.26
SMC1YFL008W YAR066WP0CX18 203 aa0.95□□□□□ -2.26
SMC1YFL008W YHR214WP0CX19 203 aa0.95□□□□□ -2.26
SMC1YFL008W URA4P20051 364 aa0.95□□□□□ -2.26
SMC1YFL008W RPC19P28000 142 aaKnown RBP0.95□□□□□ -2.26
SMC1YFL008W ITR2P30606 609 aa0.95□□□□□ -2.26
SMC1YFL008W SPT10P35208 640 aa0.95□□□□□ -2.26
SMC1YFL008W YNK1P36010 153 aaKnown RBP0.95□□□□□ -2.26
SMC1YFL008W YKT6P36015 200 aaKnown RBP0.95□□□□□ -2.26
SMC1YFL008W RSM22P36056 628 aa0.95□□□□□ -2.26
SMC1YFL008W YKR015CP36111 568 aa0.95□□□□□ -2.26
SMC1YFL008W MED8P38304 223 aa0.95□□□□□ -2.26
SMC1YFL008W SWM2P40342 146 aa0.95□□□□□ -2.26
SMC1YFL008W AIM20P40451 204 aa0.95□□□□□ -2.26
SMC1YFL008W EFM4P40516 257 aa0.95□□□□□ -2.26
SMC1YFL008W NCA3P46955 337 aa0.95□□□□□ -2.26
SMC1YFL008W ATP22P50273 684 aaPredicted RBP0.95□□□□□ -2.26
SMC1YFL008W LIF1P53150 421 aa0.95□□□□□ -2.26
SMC1YFL008W SHY1P53266 389 aa0.95□□□□□ -2.26
SMC1YFL008W TMA20P89886 181 aaPredicted RBP0.95□□□□□ -2.26
SMC1YFL008W UTP6Q02354 440 aaKnown RBP0.95□□□□□ -2.26
SMC1YFL008W STD1Q02794 444 aa0.95□□□□□ -2.26
SMC1YFL008W CCE1Q03702 353 aa0.95□□□□□ -2.26
SMC1YFL008W GYL1Q04322 720 aa0.95□□□□□ -2.26
SMC1YFL008W ECM19Q06011 112 aa0.95□□□□□ -2.26
SMC1YFL008W SEC10Q06245 871 aa0.95□□□□□ -2.26
SMC1YFL008W TSR2Q06672 205 aaKnown RBP0.95□□□□□ -2.26
SMC1YFL008W TAF10Q12030 206 aa0.95□□□□□ -2.26
SMC1YFL008W YDL199CQ12407 687 aa0.95□□□□□ -2.26
SMC1YFL008W SLH1P53327 1967 aaKnown RBP0.95□□□□□ -2.26
SMC1YFL008W COX4P04037 155 aa0.95□□□□□ -2.26
SMC1YFL008W GCN3P14741 305 aa0.95□□□□□ -2.26
SMC1YFL008W PHO84P25297 587 aaKnown RBP0.95□□□□□ -2.26
SMC1YFL008W ZIP1P31111 875 aa0.95□□□□□ -2.26
SMC1YFL008W PUP2P32379 260 aa0.95□□□□□ -2.26
SMC1YFL008W ARC19P33204 171 aaKnown RBP0.95□□□□□ -2.26
SMC1YFL008W SPO23P33757 523 aa0.95□□□□□ -2.26
SMC1YFL008W ARA1P38115 344 aa0.95□□□□□ -2.26
SMC1YFL008W VMA22P38784 181 aa0.95□□□□□ -2.26
SMC1YFL008W PCF11P39081 626 aaPredicted RBP0.95□□□□□ -2.26
SMC1YFL008W DSE1P40077 573 aa0.95□□□□□ -2.26
SMC1YFL008W EPL1P43572 832 aa0.95□□□□□ -2.26
SMC1YFL008W YPS5P53057 165 aa0.95□□□□□ -2.26
SMC1YFL008W MND1P53102 219 aa0.95□□□□□ -2.26
SMC1YFL008W RMD9P53140 646 aaKnown RBP0.95□□□□□ -2.26
SMC1YFL008W MPS2P53159 387 aa0.95□□□□□ -2.26
SMC1YFL008W RET3P53600 189 aa0.95□□□□□ -2.26
SMC1YFL008W PGA2P53903 129 aa0.95□□□□□ -2.26
SMC1YFL008W GIR2Q03768 265 aaPredicted RBP0.95□□□□□ -2.26
SMC1YFL008W SNX41Q04053 625 aa0.95□□□□□ -2.26
SMC1YFL008W SML1Q04964 104 aa0.95□□□□□ -2.26
SMC1YFL008W DCS1Q06151 350 aa0.95□□□□□ -2.26
SMC1YFL008W YLR031WQ07978 186 aa0.95□□□□□ -2.26
SMC1YFL008W NFI1Q12216 726 aa0.95□□□□□ -2.26
SMC1YFL008W SFM1Q12314 213 aa0.95□□□□□ -2.26
SMC1YFL008W SKS1Q12505 502 aa0.95□□□□□ -2.26
SMC1YFL008W YCR024C-BQ3E7Z8 88 aa0.95□□□□□ -2.26
SMC1YFL008W NCB2Q92317 146 aa0.95□□□□□ -2.26
SMC1YFL008W SEY1Q99287 776 aa0.95□□□□□ -2.26
SMC1YFL008W RPS5P26783 225 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W POT1P27796 417 aaKnown RBP RIP-Chip data0.94□□□□□ -2.26not detected
SMC1YFL008W MUD1P32605 298 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W VPS51P36116 164 aa0.94□□□□□ -2.26
SMC1YFL008W DBP7P36120 742 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W CHK1P38147 527 aa0.94□□□□□ -2.26
SMC1YFL008W RTC2P38279 296 aa0.94□□□□□ -2.26
SMC1YFL008W GDT1P38301 280 aaPredicted RBP0.94□□□□□ -2.26
SMC1YFL008W INM1P38710 295 aa0.94□□□□□ -2.26
SMC1YFL008W SUR2P38992 349 aa0.94□□□□□ -2.26
SMC1YFL008W GVP36P40531 326 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W CIN5P40917 295 aa0.94□□□□□ -2.26
SMC1YFL008W ALB1P47019 175 aaPredicted RBP0.94□□□□□ -2.26
SMC1YFL008W YGR117CP53270 476 aa0.94□□□□□ -2.26
SMC1YFL008W COS6P53344 381 aa0.94□□□□□ -2.26
SMC1YFL008W RTC4P53850 401 aa0.94□□□□□ -2.26
SMC1YFL008W SWP1Q02795 286 aa0.94□□□□□ -2.26
SMC1YFL008W DYN3Q04949 312 aa0.94□□□□□ -2.26
SMC1YFL008W ZEO1Q08245 113 aa0.94□□□□□ -2.26
SMC1YFL008W JID1Q12350 301 aa0.94□□□□□ -2.26
SMC1YFL008W RPN6Q12377 434 aa0.94□□□□□ -2.26
SMC1YFL008W MRPL8P22353 238 aa0.94□□□□□ -2.26
SMC1YFL008W UBA1P22515 1024 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W NTG1P31378 399 aa0.94□□□□□ -2.26
SMC1YFL008W YBR242WP38331 238 aa0.94□□□□□ -2.26
SMC1YFL008W ATG7P38862 630 aa0.94□□□□□ -2.26
SMC1YFL008W FAD1P38913 306 aa0.94□□□□□ -2.26
SMC1YFL008W SEC9P40357 651 aa0.94□□□□□ -2.26
SMC1YFL008W SNL1P40548 159 aa0.94□□□□□ -2.26
SMC1YFL008W INA22P40576 216 aa0.94□□□□□ -2.26
SMC1YFL008W PAC11P40960 533 aa0.94□□□□□ -2.26
SMC1YFL008W YGL082WP53155 381 aa0.94□□□□□ -2.26
SMC1YFL008W MRPL50P53724 139 aa0.94□□□□□ -2.26
SMC1YFL008W ALF1P53904 254 aa0.94□□□□□ -2.26
SMC1YFL008W NUP116Q02630 1113 aa0.94□□□□□ -2.26
SMC1YFL008W ECM11Q04110 302 aa0.94□□□□□ -2.26
SMC1YFL008W UBX2Q04228 584 aa0.94□□□□□ -2.26
SMC1YFL008W MGR3Q04472 501 aa0.94□□□□□ -2.26
SMC1YFL008W RTN1Q04947 295 aaKnown RBP0.94□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms