RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C YIL001WP40560 513 aa5.21□□□□□ -1.58
VPS72YDR485C GDS1P41913 522 aa5.21□□□□□ -1.58
VPS72YDR485C VEL1P53058 206 aa5.21□□□□□ -1.58
VPS72YDR485C CAF40P53829 373 aa5.21□□□□□ -1.58
VPS72YDR485C CSM4Q08955 156 aa5.21□□□□□ -1.58
VPS72YDR485C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
VPS72YDR485C MEX67Q99257 599 aaKnown RBP5.21□□□□□ -1.58
VPS72YDR485C TEF1P02994 458 aaKnown RBP5.2□□□□□ -1.58
VPS72YDR485C POF1P25576 258 aa5.2□□□□□ -1.58
VPS72YDR485C FHL1P39521 936 aa5.2□□□□□ -1.58
VPS72YDR485C NIF3P53081 288 aa5.2□□□□□ -1.58
VPS72YDR485C BSP1Q06604 576 aa5.2□□□□□ -1.58
VPS72YDR485C NDE2Q07500 545 aa5.2□□□□□ -1.58
VPS72YDR485C TPT1Q12272 230 aaKnown RBP5.2□□□□□ -1.58
VPS72YDR485C POM152P39685 1337 aa5.2□□□□□ -1.58
VPS72YDR485C HTB1P02293 131 aaKnown RBP5.2□□□□□ -1.58
VPS72YDR485C HTB2P02294 131 aa5.2□□□□□ -1.58
VPS72YDR485C TIP1P27654 210 aaPredicted RBP5.2□□□□□ -1.58
VPS72YDR485C CTS1P29029 562 aa5.2□□□□□ -1.58
VPS72YDR485C THO1P40040 218 aaKnown RBP5.2□□□□□ -1.58
VPS72YDR485C CTK3P46963 296 aaPredicted RBP5.2□□□□□ -1.58
VPS72YDR485C YNL040WP53960 456 aaPredicted RBP5.2□□□□□ -1.58
VPS72YDR485C YAK1P14680 807 aa5.19□□□□□ -1.58
VPS72YDR485C YKL063CP35725 167 aa5.19□□□□□ -1.58
VPS72YDR485C BMT2P38278 337 aa5.19□□□□□ -1.58
VPS72YDR485C YHK8P38776 514 aa5.19□□□□□ -1.58
VPS72YDR485C GEP4P38812 185 aa5.19□□□□□ -1.58
VPS72YDR485C TAD2P47058 250 aa5.19□□□□□ -1.58
VPS72YDR485C MST27P53176 234 aa5.19□□□□□ -1.58
VPS72YDR485C CDH1P53197 566 aa5.19□□□□□ -1.58
VPS72YDR485C ODC1Q03028 310 aa5.19□□□□□ -1.58
VPS72YDR485C POM33Q12164 279 aa5.19□□□□□ -1.58
VPS72YDR485C NDC1P32500 655 aa5.19□□□□□ -1.58
VPS72YDR485C TIR2P33890 251 aa5.19□□□□□ -1.58
VPS72YDR485C YHR035WP38769 630 aa5.19□□□□□ -1.58
VPS72YDR485C CPD1P53314 239 aa5.19□□□□□ -1.58
VPS72YDR485C TPO3Q06451 622 aa5.19□□□□□ -1.58
VPS72YDR485C YLR112WQ12130 139 aa5.19□□□□□ -1.58
VPS72YDR485C TUB1P09733 447 aaKnown RBP5.18□□□□□ -1.58
VPS72YDR485C YCR102CP25608 368 aa5.18□□□□□ -1.58
VPS72YDR485C CSE1P33307 960 aa5.18□□□□□ -1.58
VPS72YDR485C SPO23P33757 523 aa5.18□□□□□ -1.58
VPS72YDR485C RSM22P36056 628 aa5.18□□□□□ -1.58
VPS72YDR485C YBR241CP38142 488 aa5.18□□□□□ -1.58
VPS72YDR485C YPT35P38815 214 aaKnown RBP5.18□□□□□ -1.58
VPS72YDR485C RRT5P43607 289 aa5.18□□□□□ -1.58
VPS72YDR485C LSG1P53145 640 aaKnown RBP5.18□□□□□ -1.58
VPS72YDR485C RPN6Q12377 434 aa5.18□□□□□ -1.58
VPS72YDR485C ARP6Q12509 438 aa5.18□□□□□ -1.58
VPS72YDR485C EHD3P28817 500 aa5.18□□□□□ -1.58
VPS72YDR485C IDP2P41939 412 aa5.18□□□□□ -1.58
VPS72YDR485C WWM1P43582 211 aaKnown RBP5.18□□□□□ -1.58
VPS72YDR485C YJR079WP47126 109 aa5.18□□□□□ -1.58
VPS72YDR485C MTM1P53320 366 aa5.18□□□□□ -1.58
VPS72YDR485C DIG1Q03063 452 aaKnown RBP5.18□□□□□ -1.58
VPS72YDR485C ACF2Q12168 779 aa5.18□□□□□ -1.58
VPS72YDR485C RBK1P25332 333 aa5.17□□□□□ -1.58
VPS72YDR485C YCR022CP25620 114 aa5.17□□□□□ -1.58
VPS72YDR485C YPC1P38298 316 aa5.17□□□□□ -1.58
VPS72YDR485C YER121WP40076 114 aa5.17□□□□□ -1.58
VPS72YDR485C YFR057WP43625 151 aa5.17□□□□□ -1.58
VPS72YDR485C YIP3P53633 176 aa5.17□□□□□ -1.58
VPS72YDR485C CCE1Q03702 353 aa5.17□□□□□ -1.58
VPS72YDR485C MRPL51Q06090 140 aaPredicted RBP5.17□□□□□ -1.58
VPS72YDR485C TIM18Q08749 192 aa5.17□□□□□ -1.58
VPS72YDR485C AI5_BETAQ9ZZX0 354 aa5.17□□□□□ -1.58
VPS72YDR485C YAR066WP0CX18 203 aa5.16□□□□□ -1.58
VPS72YDR485C YHR214WP0CX19 203 aa5.16□□□□□ -1.58
VPS72YDR485C MTF1P14908 341 aaKnown RBP5.16□□□□□ -1.58
VPS72YDR485C IRC7P43623 340 aa5.16□□□□□ -1.58
VPS72YDR485C GWT1P47026 490 aa5.16□□□□□ -1.58
VPS72YDR485C YNL181WP53878 407 aa5.16□□□□□ -1.58
VPS72YDR485C SNA4Q07549 140 aa5.16□□□□□ -1.58
VPS72YDR485C YLR012CQ07927 99 aa5.16□□□□□ -1.58
VPS72YDR485C BRX1Q08235 291 aaKnown RBP5.16□□□□□ -1.58
VPS72YDR485C GPM2Q12008 311 aa5.16□□□□□ -1.58
VPS72YDR485C SNF6P18888 332 aa5.16□□□□□ -1.58
VPS72YDR485C SUR2P38992 349 aa5.16□□□□□ -1.58
VPS72YDR485C YAT2P40017 923 aa5.16□□□□□ -1.58
VPS72YDR485C RPL10P41805 221 aaKnown RBP5.16□□□□□ -1.58
VPS72YDR485C TES1P41903 349 aaKnown RBP5.16□□□□□ -1.58
VPS72YDR485C GUF1P46943 645 aa5.16□□□□□ -1.58
VPS72YDR485C GET1P53192 235 aa5.16□□□□□ -1.58
VPS72YDR485C IRC15Q02733 499 aa5.16□□□□□ -1.58
VPS72YDR485C YDL009CQ12210 107 aa5.16□□□□□ -1.58
VPS72YDR485C ILV1P00927 576 aaKnown RBP5.15□□□□□ -1.58
VPS72YDR485C ITR2P30606 609 aa5.15□□□□□ -1.58
VPS72YDR485C AST1P35183 429 aa5.15□□□□□ -1.58
VPS72YDR485C MCH2P36032 473 aa5.15□□□□□ -1.58
VPS72YDR485C MST28P39552 234 aa5.15□□□□□ -1.58
VPS72YDR485C VRG4P40107 337 aa5.15□□□□□ -1.58
VPS72YDR485C ALG8P40351 577 aa5.15□□□□□ -1.58
VPS72YDR485C RTS2P40962 232 aa5.15□□□□□ -1.58
VPS72YDR485C YGL159WP53110 370 aa5.15□□□□□ -1.58
VPS72YDR485C CTF19Q02732 369 aa5.15□□□□□ -1.58
VPS72YDR485C TAZ1Q06510 381 aa5.15□□□□□ -1.58
VPS72YDR485C PLB3Q08108 686 aa5.15□□□□□ -1.58
VPS72YDR485C IRC10Q08118 586 aa5.15□□□□□ -1.58
VPS72YDR485C RNA15P25299 296 aaPredicted RBP5.15□□□□□ -1.59
VPS72YDR485C SSO1P32867 290 aa5.15□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms