RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	FBA1	P14540	359 aa	Known RBP	11.25	□□□□□ -0.61
NPL3	YDR432W	HIR2	P32480	875 aa		11.25	□□□□□ -0.61
NPL3	YDR432W	HCS1	P34243	683 aa		11.25	□□□□□ -0.61
NPL3	YDR432W	SKN7	P38889	622 aa		11.25	□□□□□ -0.61
NPL3	YDR432W	GPI8	P49018	411 aa		11.25	□□□□□ -0.61
NPL3	YDR432W	TIM10	P87108	93 aa		11.25	□□□□□ -0.61
NPL3	YDR432W	RNH202	Q05635	350 aa		11.25	□□□□□ -0.61
NPL3	YDR432W	TAF3	Q12297	353 aa		11.25	□□□□□ -0.61
NPL3	YDR432W	DFG16	Q99234	619 aa		11.25	□□□□□ -0.61
NPL3	YDR432W	DET1	Q99288	334 aa	Known RBP	11.25	□□□□□ -0.61
NPL3	YDR432W	SIR3	P06701	978 aa		11.24	□□□□□ -0.61
NPL3	YDR432W	PEP4	P07267	405 aa	Known RBP	11.24	□□□□□ -0.61
NPL3	YDR432W	YOL163W	P0CF20	169 aa		11.24	□□□□□ -0.61
NPL3	YDR432W	TFS1	P14306	219 aa		11.24	□□□□□ -0.61
NPL3	YDR432W	PDA1	P16387	420 aa	Known RBP	11.24	□□□□□ -0.61
NPL3	YDR432W	POL4	P25615	582 aa		11.24	□□□□□ -0.61
NPL3	YDR432W	HSP30	P25619	332 aa		11.24	□□□□□ -0.61
NPL3	YDR432W	SAC1	P32368	623 aa	Known RBP	11.24	□□□□□ -0.61
NPL3	YDR432W	CYS4	P32582	507 aa	Known RBP	11.24	□□□□□ -0.61
NPL3	YDR432W	MAE1	P36013	669 aa	Known RBP	11.24	□□□□□ -0.61
NPL3	YDR432W	ARN2	P38724	620 aa		11.24	□□□□□ -0.61
NPL3	YDR432W	MTC6	P38849	526 aa		11.24	□□□□□ -0.61
NPL3	YDR432W	YHR219W	P38900	624 aa		11.24	□□□□□ -0.61
NPL3	YDR432W	THO1	P40040	218 aa	Known RBP	11.24	□□□□□ -0.61
NPL3	YDR432W	YJR098C	P47139	656 aa		11.24	□□□□□ -0.61
NPL3	YDR432W	SYO1	Q07395	620 aa		11.24	□□□□□ -0.61
NPL3	YDR432W	PML1	Q07930	204 aa	Predicted RBP	11.24	□□□□□ -0.61
NPL3	YDR432W	RSA1	Q08932	381 aa		11.24	□□□□□ -0.61
NPL3	YDR432W	GPX1	P36014	167 aa		11.23	□□□□□ -0.61
NPL3	YDR432W	RCY1	P39531	840 aa		11.23	□□□□□ -0.61
NPL3	YDR432W	YAR028W	P39548	234 aa		11.23	□□□□□ -0.61
NPL3	YDR432W	GAT2	P40209	560 aa		11.23	□□□□□ -0.61
NPL3	YDR432W	YFL051C	P43552	160 aa		11.23	□□□□□ -0.61
NPL3	YDR432W	BUD9	P53226	547 aa		11.23	□□□□□ -0.61
NPL3	YDR432W	MEP3	P53390	489 aa		11.23	□□□□□ -0.61
NPL3	YDR432W	SCS7	Q03529	384 aa		11.23	□□□□□ -0.61
NPL3	YDR432W	YMR226C	Q05016	267 aa	Known RBP	11.23	□□□□□ -0.61
NPL3	YDR432W	YPR097W	Q06839	1073 aa		11.23	□□□□□ -0.61
NPL3	YDR432W	NTG2	Q08214	380 aa		11.23	□□□□□ -0.61
NPL3	YDR432W	NIP7	Q08962	181 aa	Known RBP	11.23	□□□□□ -0.61
NPL3	YDR432W	WSC3	Q12215	556 aa		11.23	□□□□□ -0.61
NPL3	YDR432W	SNC1	P31109	117 aa		11.22	□□□□□ -0.61
NPL3	YDR432W	YRB2	P40517	327 aa		11.22	□□□□□ -0.61
NPL3	YDR432W	FAR7	P43592	221 aa		11.22	□□□□□ -0.61
NPL3	YDR432W	ACS1	Q01574	713 aa		11.22	□□□□□ -0.61
NPL3	YDR432W	KAP120	Q02932	1032 aa		11.22	□□□□□ -0.61
NPL3	YDR432W	YPL191C	Q08930	360 aa		11.22	□□□□□ -0.61
NPL3	YDR432W	PTP2	P29461	750 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	ITR2	P30606	609 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	TIM12	P32830	109 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	TRS65	P32893	560 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	MRPS5	P33759	307 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	YIL166C	P40445	542 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	SHE4	P51534	789 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	PRM8	P53174	237 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	PCP1	P53259	346 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	DAM1	P53267	343 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	SNF12	P53628	566 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	HAS1	Q03532	505 aa	Known RBP	11.21	□□□□□ -0.61
NPL3	YDR432W	COQ10	Q08058	207 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	CRT10	Q08226	957 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	BTS1	Q12051	335 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	Q0297	Q9ZZV8	51 aa		11.21	□□□□□ -0.61
NPL3	YDR432W	RPC40	P07703	335 aa	Known RBP	11.2	□□□□□ -0.62
NPL3	YDR432W	NUP1	P20676	1076 aa		11.2	□□□□□ -0.62
NPL3	YDR432W	HBS1	P32769	611 aa	Known RBP	11.2	□□□□□ -0.62
NPL3	YDR432W	MRPL6	P32904	214 aa		11.2	□□□□□ -0.62
NPL3	YDR432W	MDL1	P33310	695 aa		11.2	□□□□□ -0.62
NPL3	YDR432W	SOF1	P33750	489 aa	Known RBP	11.2	□□□□□ -0.62
NPL3	YDR432W	ECM15	P35195	104 aa		11.2	□□□□□ -0.62
NPL3	YDR432W	COS9	P36034	407 aa		11.2	□□□□□ -0.62
NPL3	YDR432W	PEX18	P38855	283 aa		11.2	□□□□□ -0.62
NPL3	YDR432W	YEL068C	P39977	110 aa		11.2	□□□□□ -0.62
NPL3	YDR432W	YTA6	P40328	754 aa		11.2	□□□□□ -0.62
NPL3	YDR432W	YIL165C	P40446	119 aa		11.2	□□□□□ -0.62
NPL3	YDR432W	POP1	P41812	875 aa		11.2	□□□□□ -0.62
NPL3	YDR432W	GCN20	P43535	752 aa	Known RBP	11.2	□□□□□ -0.62
NPL3	YDR432W	VMA10	P48836	114 aa	Known RBP	11.2	□□□□□ -0.62
NPL3	YDR432W	IMD4	P50094	524 aa	Known RBP	11.2	□□□□□ -0.62
NPL3	YDR432W	RBG2	P53295	368 aa	Known RBP	11.2	□□□□□ -0.62
NPL3	YDR432W	NFI1	Q12216	726 aa		11.2	□□□□□ -0.62
NPL3	YDR432W	BPH1	P25356	2167 aa		11.2	□□□□□ -0.62
NPL3	YDR432W	PRB1	P09232	635 aa		11.19	□□□□□ -0.62
NPL3	YDR432W	YPK2	P18961	677 aa		11.19	□□□□□ -0.62
NPL3	YDR432W	RHB1	P25378	209 aa		11.19	□□□□□ -0.62
NPL3	YDR432W	SPO73	P40031	143 aa		11.19	□□□□□ -0.62
NPL3	YDR432W	ADO1	P47143	340 aa	Known RBP	11.19	□□□□□ -0.62
NPL3	YDR432W	MPP6	P53725	186 aa	Predicted RBP	11.19	□□□□□ -0.62
NPL3	YDR432W	YKR011C	Q02209	353 aa		11.19	□□□□□ -0.62
NPL3	YDR432W	YMR099C	Q03161	297 aa	Known RBP	11.19	□□□□□ -0.62
NPL3	YDR432W	SEC13	Q04491	297 aa	Known RBP	11.19	□□□□□ -0.62
NPL3	YDR432W	YPR127W	Q06494	345 aa		11.19	□□□□□ -0.62
NPL3	YDR432W	YPR147C	Q06522	304 aa	Known RBP	11.19	□□□□□ -0.62
NPL3	YDR432W	APC2	Q12440	853 aa		11.19	□□□□□ -0.62
NPL3	YDR432W	YOR343C	Q12484	108 aa		11.19	□□□□□ -0.62
NPL3	YDR432W	SET6	Q12529	373 aa		11.19	□□□□□ -0.62
NPL3	YDR432W	SPO24	Q3E752	67 aa		11.19	□□□□□ -0.62
NPL3	YDR432W	ITR1	P30605	584 aa		11.18	□□□□□ -0.62
NPL3	YDR432W	MSN4	P33749	630 aa		11.18	□□□□□ -0.62
NPL3	YDR432W	JEN1	P36035	616 aa		11.18	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms