RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC1, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC1YDR177W BNR1P40450 1375 aa4.23□□□□□ -1.73
UBC1YDR177W YOR1P53049 1477 aa4.23□□□□□ -1.73
UBC1YDR177W TDH3P00359 332 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
UBC1YDR177W RPL20AP0CX23 172 aaKnown RBP4.22□□□□□ -1.73
UBC1YDR177W RPL20BP0CX24 172 aaPredicted RBP4.22□□□□□ -1.73
UBC1YDR177W YER190C-BP0CX94 160 aa4.22□□□□□ -1.73
UBC1YDR177W YEL077W-AP0CX95 160 aa4.22□□□□□ -1.73
UBC1YDR177W YGR296C-BP0CX96 160 aa4.22□□□□□ -1.73
UBC1YDR177W YPL283W-BP0CX97 160 aa4.22□□□□□ -1.73
UBC1YDR177W YPR204C-AP0CX98 160 aa4.22□□□□□ -1.73
UBC1YDR177W POL30P15873 258 aaKnown RBP4.22□□□□□ -1.73
UBC1YDR177W RPL24BP24000 155 aaKnown RBP4.22□□□□□ -1.73
UBC1YDR177W RPL16AP26784 199 aaKnown RBP4.22□□□□□ -1.73
UBC1YDR177W NAT2P37293 288 aa4.22□□□□□ -1.73
UBC1YDR177W YBP1P38315 674 aa4.22□□□□□ -1.73
UBC1YDR177W YIL169CP40442 995 aa4.22□□□□□ -1.73
UBC1YDR177W YMR209CQ03648 457 aa4.22□□□□□ -1.73
UBC1YDR177W CMS1Q07897 291 aaKnown RBP4.22□□□□□ -1.73
UBC1YDR177W HMS1Q12398 434 aa4.22□□□□□ -1.73
UBC1YDR177W DET1Q99288 334 aaKnown RBP4.22□□□□□ -1.73
UBC1YDR177W ATP6P00854 259 aa4.21□□□□□ -1.74
UBC1YDR177W CTA1P15202 515 aa4.21□□□□□ -1.74
UBC1YDR177W PPA2P28239 310 aa4.21□□□□□ -1.74
UBC1YDR177W NUP2P32499 720 aa4.21□□□□□ -1.74
UBC1YDR177W YKL063CP35725 167 aa4.21□□□□□ -1.74
UBC1YDR177W PMU1P36069 295 aa4.21□□□□□ -1.74
UBC1YDR177W AIM29P36154 155 aa4.21□□□□□ -1.74
UBC1YDR177W MIX23P38162 196 aa4.21□□□□□ -1.74
UBC1YDR177W JLP2P40206 208 aa4.21□□□□□ -1.74
UBC1YDR177W SWC4P53201 476 aa4.21□□□□□ -1.74
UBC1YDR177W RPM2Q02773 1202 aa4.21□□□□□ -1.74
UBC1YDR177W RIM13Q03792 727 aa4.21□□□□□ -1.74
UBC1YDR177W KRE28Q04431 385 aa4.21□□□□□ -1.74
UBC1YDR177W RTN1Q04947 295 aaKnown RBP4.21□□□□□ -1.74
UBC1YDR177W ASR1Q06834 288 aa4.21□□□□□ -1.74
UBC1YDR177W GAT3Q07928 141 aa4.21□□□□□ -1.74
UBC1YDR177W SMC5Q08204 1093 aa4.21□□□□□ -1.74
UBC1YDR177W RRP42Q12277 265 aaPredicted RBP4.21□□□□□ -1.74
UBC1YDR177W ATG31Q12421 196 aa4.21□□□□□ -1.74
UBC1YDR177W TY1B-JR2P47100 1755 aaKnown RBP4.21□□□□□ -1.74
UBC1YDR177W TY1B-ER2Q03619 1755 aa4.21□□□□□ -1.74
UBC1YDR177W TY1B-MR1Q04214 1755 aa4.21□□□□□ -1.74
UBC1YDR177W TY1B-MR2Q04670 1755 aaKnown RBP4.21□□□□□ -1.74
UBC1YDR177W TY1B-LR1Q12088 1755 aaKnown RBP4.21□□□□□ -1.74
UBC1YDR177W TY1B-NL1Q12112 1755 aa4.21□□□□□ -1.74
UBC1YDR177W TY1B-GR1Q12141 1755 aa4.21□□□□□ -1.74
UBC1YDR177W TY1B-BLQ12490 1755 aa4.21□□□□□ -1.74
UBC1YDR177W HIS1P00498 297 aaKnown RBP4.2□□□□□ -1.74
UBC1YDR177W PRS4P38063 326 aaPredicted RBP4.2□□□□□ -1.74
UBC1YDR177W MAL32P38158 584 aa4.2□□□□□ -1.74
UBC1YDR177W SBE22P38814 852 aa4.2□□□□□ -1.74
UBC1YDR177W PCI8P40512 444 aa4.2□□□□□ -1.74
UBC1YDR177W YFL067WP43537 175 aa4.2□□□□□ -1.74
UBC1YDR177W RTT101P47050 842 aa4.2□□□□□ -1.74
UBC1YDR177W TAD2P47058 250 aa4.2□□□□□ -1.74
UBC1YDR177W BIO3P50277 480 aa4.2□□□□□ -1.74
UBC1YDR177W MAL12P53341 584 aa4.2□□□□□ -1.74
UBC1YDR177W MRPS17Q03246 237 aaPredicted RBP4.2□□□□□ -1.74
UBC1YDR177W YMR027WQ04371 470 aa4.2□□□□□ -1.74
UBC1YDR177W FMP42Q04991 504 aa4.2□□□□□ -1.74
UBC1YDR177W YNL162W-AQ3E7A8 72 aa4.2□□□□□ -1.74
UBC1YDR177W SPP41P38904 1435 aa4.2□□□□□ -1.74
UBC1YDR177W SMC4Q12267 1418 aa4.2□□□□□ -1.74
UBC1YDR177W TDH2P00358 332 aaKnown RBP4.19□□□□□ -1.74
UBC1YDR177W PRB1P09232 635 aa4.19□□□□□ -1.74
UBC1YDR177W NHP6BP11633 99 aaKnown RBP4.19□□□□□ -1.74
UBC1YDR177W HPR1P17629 752 aaKnown RBP4.19□□□□□ -1.74
UBC1YDR177W RPL16BP26785 198 aaKnown RBP4.19□□□□□ -1.74
UBC1YDR177W ECM8P38246 354 aa4.19□□□□□ -1.74
UBC1YDR177W XBP1P40489 647 aa4.19□□□□□ -1.74
UBC1YDR177W OST1P41543 476 aaKnown RBP4.19□□□□□ -1.74
UBC1YDR177W TES1P41903 349 aaKnown RBP4.19□□□□□ -1.74
UBC1YDR177W YFL040WP43562 540 aa4.19□□□□□ -1.74
UBC1YDR177W ERP1Q05359 219 aaKnown RBP4.19□□□□□ -1.74
UBC1YDR177W PLP2Q12017 286 aa4.19□□□□□ -1.74
UBC1YDR177W POM33Q12164 279 aa4.19□□□□□ -1.74
UBC1YDR177W UTP23Q12339 254 aaKnown RBP4.19□□□□□ -1.74
UBC1YDR177W YCR024C-BQ3E7Z8 88 aa4.19□□□□□ -1.74
UBC1YDR177W YRF1-1P0CX20 1796 aa4.19□□□□□ -1.74
UBC1YDR177W YRF1-5P0CX21 1796 aa4.19□□□□□ -1.74
UBC1YDR177W YRF1-8P0CX22 1796 aa4.19□□□□□ -1.74
UBC1YDR177W TRM732Q03496 1420 aa4.19□□□□□ -1.74
UBC1YDR177W NTE1Q04958 1679 aa4.19□□□□□ -1.74
UBC1YDR177W ADH2P00331 348 aaKnown RBP4.18□□□□□ -1.74
UBC1YDR177W KSS1P14681 368 aa4.18□□□□□ -1.74
UBC1YDR177W PTP1P25044 335 aa4.18□□□□□ -1.74
UBC1YDR177W YCP4P25349 247 aaKnown RBP4.18□□□□□ -1.74
UBC1YDR177W PHA2P32452 334 aa4.18□□□□□ -1.74
UBC1YDR177W RPC37P36121 282 aa4.18□□□□□ -1.74
UBC1YDR177W MTC4P38335 694 aaKnown RBP4.18□□□□□ -1.74
UBC1YDR177W BIG1P38813 335 aa4.18□□□□□ -1.74
UBC1YDR177W DDI1P40087 428 aa4.18□□□□□ -1.74
UBC1YDR177W COA1P40452 197 aa4.18□□□□□ -1.74
UBC1YDR177W ABM1P47146 123 aa4.18□□□□□ -1.74
UBC1YDR177W MRM2P53123 320 aa4.18□□□□□ -1.74
UBC1YDR177W CPD1P53314 239 aa4.18□□□□□ -1.74
UBC1YDR177W MTQ1P53944 314 aa4.18□□□□□ -1.74
UBC1YDR177W MYO5Q04439 1219 aaKnown RBP4.18□□□□□ -1.74
UBC1YDR177W YDL114WQ07530 308 aa4.18□□□□□ -1.74
UBC1YDR177W DTD1Q07648 150 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms